RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 SAAL1Q96ER3 474 aa29.25■■■□□ 2.27
SSU72-201ENST00000291386 FBXL18Q96ME1 805 aa29.25■■■□□ 2.27
SSU72-201ENST00000291386 FAM213AQ9BRX8 229 aa29.25■■■□□ 2.27
SSU72-201ENST00000291386 KIAA1586Q9HCI6 787 aa29.25■■■□□ 2.27
SSU72-201ENST00000291386 DERAQ9Y315 318 aa29.25■■■□□ 2.27
SSU72-201ENST00000291386 PRRC2BQ5JSZ5 2229 aaKnown RBP29.24■■■□□ 2.27
SSU72-201ENST00000291386 CYP3A5P20815 502 aa29.24■■■□□ 2.27
SSU72-201ENST00000291386 PDE12Q6L8Q7 609 aaKnown RBP29.24■■■□□ 2.27
SSU72-201ENST00000291386 ZSWIM2Q8NEG5 633 aa29.24■■■□□ 2.27
SSU72-201ENST00000291386 TLR9Q9NR96 1032 aa29.24■■■□□ 2.27
SSU72-201ENST00000291386 TRAF3IP3Q9Y228 551 aa29.24■■■□□ 2.27
SSU72-201ENST00000291386 PRG3Q9Y2Y8 225 aaPredicted RBP29.24■■■□□ 2.27
SSU72-201ENST00000291386 CASTOR2A6NHX0 329 aa29.23■■■□□ 2.27
SSU72-201ENST00000291386 TMEM189-UBE2V1I3L0A0 370 aa29.23■■■□□ 2.27
SSU72-201ENST00000291386 FSCN2O14926 492 aa29.23■■■□□ 2.27
SSU72-201ENST00000291386 IL18RAPO95256 599 aa29.23■■■□□ 2.27
SSU72-201ENST00000291386 SOX4Q06945 474 aaPredicted RBP29.23■■■□□ 2.27
SSU72-201ENST00000291386 MYBPC2Q14324 1141 aa29.23■■■□□ 2.27
SSU72-201ENST00000291386 HSP90AA2PQ14568 343 aaPredicted RBP29.23■■■□□ 2.27
SSU72-201ENST00000291386 SLC9A9Q8IVB4 645 aa29.23■■■□□ 2.27
SSU72-201ENST00000291386 RNF168Q8IYW5 571 aaPredicted RBP29.23■■■□□ 2.27
SSU72-201ENST00000291386 DDX27Q96GQ7 796 aaKnown RBP29.23■■■□□ 2.27
SSU72-201ENST00000291386 PAAF1Q9BRP4 392 aa29.23■■■□□ 2.27
SSU72-201ENST00000291386 UBQLN1Q9UMX0 589 aaKnown RBP29.23■■■□□ 2.27
SSU72-201ENST00000291386 CLIC2O15247 247 aa29.22■■■□□ 2.27
SSU72-201ENST00000291386 NFIL3Q16649 462 aa29.22■■■□□ 2.27
SSU72-201ENST00000291386 UPP1Q16831 310 aa29.22■■■□□ 2.27
SSU72-201ENST00000291386 TIGD5Q53EQ6 642 aa29.22■■■□□ 2.27
SSU72-201ENST00000291386 NT5DC4Q86YG4 428 aa29.22■■■□□ 2.27
SSU72-201ENST00000291386 XXYLT1Q8NBI6 393 aa29.22■■■□□ 2.27
SSU72-201ENST00000291386 KIF12Q96FN5 646 aa29.22■■■□□ 2.27
SSU72-201ENST00000291386 CLSTN2Q9H4D0 955 aa29.22■■■□□ 2.27
SSU72-201ENST00000291386 DMAC2Q9NW81 257 aa29.22■■■□□ 2.27
SSU72-201ENST00000291386 MAN1B1Q9UKM7 699 aa29.22■■■□□ 2.27
SSU72-201ENST00000291386 C2CD2Q9Y426 696 aa29.22■■■□□ 2.27
SSU72-201ENST00000291386 GOLGA8IPA6NC78 632 aa29.21■■■□□ 2.27
SSU72-201ENST00000291386 GOLGA8JA6NMD2 632 aa29.21■■■□□ 2.27
SSU72-201ENST00000291386 XPOTO43592 962 aaKnown RBP29.21■■■□□ 2.27
SSU72-201ENST00000291386 RPL9P32969 192 aaKnown RBP29.21■■■□□ 2.27
SSU72-201ENST00000291386 DCLRE1AQ6PJP8 1040 aa29.21■■■□□ 2.27
SSU72-201ENST00000291386 VN1R3Q9BXE9 311 aa29.21■■■□□ 2.27
SSU72-201ENST00000291386 RBAKQ9NYW8 714 aaPredicted RBP29.21■■■□□ 2.27
SSU72-201ENST00000291386 ADAM28Q9UKQ2 775 aa29.21■■■□□ 2.27
SSU72-201ENST00000291386 ZNF233A6NK53 670 aa29.2■■■□□ 2.26
SSU72-201ENST00000291386 CALUO43852 315 aaPredicted RBP29.2■■■□□ 2.26
SSU72-201ENST00000291386 LRPAP1P30533 357 aa29.2■■■□□ 2.26
SSU72-201ENST00000291386 CLCNKBP51801 687 aa29.2■■■□□ 2.26
SSU72-201ENST00000291386 ERVFC1P60507 584 aa29.2■■■□□ 2.26
SSU72-201ENST00000291386 JADE1Q6IE81 842 aa29.2■■■□□ 2.26
SSU72-201ENST00000291386 SMYD4Q8IYR2 804 aaPredicted RBP29.2■■■□□ 2.26
SSU72-201ENST00000291386 C18orf25Q96B23 403 aaPredicted RBP29.2■■■□□ 2.26
SSU72-201ENST00000291386 FAM212AQ96EL1 285 aa29.2■■■□□ 2.26
SSU72-201ENST00000291386 NSUN3Q9H649 340 aaKnown RBP29.2■■■□□ 2.26
SSU72-201ENST00000291386 GOLGA2P5Q9HBQ8 144 aa29.2■■■□□ 2.26
SSU72-201ENST00000291386 NGRNQ9NPE2 291 aaKnown RBP29.2■■■□□ 2.26
SSU72-201ENST00000291386 KIAA1468Q9P260 1216 aa29.2■■■□□ 2.26
SSU72-201ENST00000291386 CACNG4Q9UBN1 327 aa29.2■■■□□ 2.26
SSU72-201ENST00000291386 MAPK8IP1Q9UQF2 711 aa29.2■■■□□ 2.26
SSU72-201ENST00000291386 IRS1P35568 1242 aa29.19■■■□□ 2.26
SSU72-201ENST00000291386 PRCPP42785 496 aa29.19■■■□□ 2.26
SSU72-201ENST00000291386 SPAG1Q07617 926 aa29.19■■■□□ 2.26
SSU72-201ENST00000291386 MORC3Q14149 939 aa29.19■■■□□ 2.26
SSU72-201ENST00000291386 CAMK4Q16566 473 aa29.19■■■□□ 2.26
SSU72-201ENST00000291386 SPATA1Q5VX52 437 aa29.19■■■□□ 2.26
SSU72-201ENST00000291386 TRIML1Q8N9V2 468 aa29.19■■■□□ 2.26
SSU72-201ENST00000291386 ZBP1Q9H171 429 aa29.19■■■□□ 2.26
SSU72-201ENST00000291386 F8W810 466 aa29.18■■■□□ 2.26
SSU72-201ENST00000291386 KIF4AO95239 1232 aa29.18■■■□□ 2.26
SSU72-201ENST00000291386 SOD2P04179 222 aa29.18■■■□□ 2.26
SSU72-201ENST00000291386 NFICP08651 508 aa29.18■■■□□ 2.26
SSU72-201ENST00000291386 PPP1R2P41236 205 aa29.18■■■□□ 2.26
SSU72-201ENST00000291386 CYP2J2P51589 502 aa29.18■■■□□ 2.26
SSU72-201ENST00000291386 TMEM132DQ14C87 1099 aa29.18■■■□□ 2.26
SSU72-201ENST00000291386 SURF1Q15526 300 aa29.18■■■□□ 2.26
SSU72-201ENST00000291386 SNRNP35Q16560 246 aaKnown RBP29.18■■■□□ 2.26
SSU72-201ENST00000291386 ZCWPW2Q504Y3 356 aa29.18■■■□□ 2.26
SSU72-201ENST00000291386 CD300LGQ6UXG3 332 aa29.18■■■□□ 2.26
SSU72-201ENST00000291386 CBWD2Q8IUF1 395 aa29.18■■■□□ 2.26
SSU72-201ENST00000291386 ADSSL1Q8N142 457 aa29.18■■■□□ 2.26
SSU72-201ENST00000291386 VPS52Q8N1B4 723 aa29.18■■■□□ 2.26
SSU72-201ENST00000291386 GPT2Q8TD30 523 aa29.18■■■□□ 2.26
SSU72-201ENST00000291386 TCF25Q9BQ70 676 aa29.18■■■□□ 2.26
SSU72-201ENST00000291386 HERC2P3Q9BVR0 1158 aa29.18■■■□□ 2.26
SSU72-201ENST00000291386 TUBGCP4Q9UGJ1 667 aa29.18■■■□□ 2.26
SSU72-201ENST00000291386 IRAK3Q9Y616 596 aa29.18■■■□□ 2.26
SSU72-201ENST00000291386 MYO7AQ13402 2215 aa29.18■■■□□ 2.26
SSU72-201ENST00000291386 PODXLO00592 558 aa29.17■■■□□ 2.26
SSU72-201ENST00000291386 TADA2AO75478 443 aa29.17■■■□□ 2.26
SSU72-201ENST00000291386 NR3C1P04150 777 aa29.17■■■□□ 2.26
SSU72-201ENST00000291386 CTSAP10619 480 aa29.17■■■□□ 2.26
SSU72-201ENST00000291386 WNT7BP56706 349 aa29.17■■■□□ 2.26
SSU72-201ENST00000291386 FUT10Q6P4F1 479 aa29.17■■■□□ 2.26
SSU72-201ENST00000291386 BEST2Q8NFU1 509 aa29.17■■■□□ 2.26
SSU72-201ENST00000291386 MAFAQ8NHW3 353 aaPredicted RBP29.17■■■□□ 2.26
SSU72-201ENST00000291386 RABGGTAQ92696 567 aa29.17■■■□□ 2.26
SSU72-201ENST00000291386 EXOC3O60645 756 aa29.16■■■□□ 2.26
SSU72-201ENST00000291386 B3GAT3O94766 335 aa29.16■■■□□ 2.26
SSU72-201ENST00000291386 BMP6P22004 513 aa29.16■■■□□ 2.26
SSU72-201ENST00000291386 BMS1Q14692 1282 aaKnown RBP29.16■■■□□ 2.26
SSU72-201ENST00000291386 EDRF1Q3B7T1 1238 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms