RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 ABL1P00519 1130 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 CKBP12277 381 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 CD52P31358 61 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 EFNA5P52803 228 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 ALCAMQ13740 583 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 GPNMBQ14956 572 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 PKN2Q16513 984 aaKnown RBP12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 SNRNP35Q16560 246 aaKnown RBP12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 TMEM132AQ24JP5 1023 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 LRRC26Q2I0M4 334 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 IQCEQ6IPM2 695 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 TAF2Q6P1X5 1199 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 SLC39A5Q6ZMH5 540 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 CATSPER4Q7RTX7 472 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 FAM186BQ8IYM0 893 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 CRACR2AQ9BSW2 395 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 MSTO1Q9BUK6 570 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 MRPL4Q9BYD3 311 aaKnown RBP12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 NFKBIZQ9BYH8 718 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 CDT1Q9H211 546 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 CNTNAP2Q9UHC6 1331 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 MGEA5O60502 916 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 LCA5LO95447 670 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 PIGRP01833 764 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 IVLP07476 585 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 COL6A1P12109 1028 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 PROZP22891 400 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 ACTN2P35609 894 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 VAV2P52735 878 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 NFX1Q12986 1120 aaKnown RBP12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 TCTN1Q2MV58 587 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 ZNF568Q3ZCX4 644 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 CCDC122Q5T0U0 273 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 TCERG1LQ5VWI1 586 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 PPP4R3CPQ6ZMV5 832 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 TSHZ1Q6ZSZ6 1077 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 ZNF410Q86VK4 478 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 IFNLR1Q8IU57 520 aaPredicted RBP12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 TRIM59Q8IWR1 403 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 XXYLT1Q8NBI6 393 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 NOC4LQ9BVI4 516 aaKnown RBP12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 GCOM2Q9BZD3 368 aaPredicted RBP12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 C2orf40Q9H1Z8 148 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 AGO2Q9UKV8 859 aaKnown RBP12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 GUCA1BQ9UMX6 200 aa12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 PIN4Q9Y237 131 aaKnown RBP12.4□□□□□ -0.42
CHRNB3-201ENST00000289957 EPHB6O15197 1021 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 CLDN3O15551 220 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 IPO7O95373 1038 aaKnown RBP12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 CD4P01730 458 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 RHOXF2BP0C7M4 288 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 ITGB8P26012 769 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 TLE2Q04725 743 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 ZSCAN26Q16670 478 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 CBWD6Q4V339 395 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 CBWD3Q5JTY5 395 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 CBWD5Q5RIA9 395 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 KIAA1328Q86T90 577 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 SLC35C1Q96A29 364 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 HVCN1Q96D96 273 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 SCLYQ96I15 445 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 RHOXF2Q9BQY4 288 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 PPP1R12CQ9BZL4 782 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 EXOC7Q9UPT5 735 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 ATP11BQ9Y2G3 1177 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 STYXL1Q9Y6J8 313 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 TRIP11Q15643 1979 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 TOM1L1O75674 476 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 ERLIN2O94905 339 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 PRLRP16471 622 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 CRYBB1P53674 252 aaPredicted RBP12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 PPP3CAQ08209 521 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 FAAP100Q0VG06 881 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 PTK7Q13308 1070 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 LPIN1Q14693 890 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 SLC17A8Q8NDX2 589 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 FAM212AQ96EL1 285 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 CEP63Q96MT8 703 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 EDEM3Q9BZQ6 932 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 RNF39Q9H2S5 420 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 NXF3Q9H4D5 531 aaKnown RBP12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 PRMT7Q9NVM4 692 aaPredicted RBP12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 ST3GAL5Q9UNP4 418 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 TRPV2Q9Y5S1 764 aa12.39□□□□□ -0.43
CHRNB3-201ENST00000289957 A0A1B0GUA9 196 aa12.38□□□□□ -0.43
CHRNB3-201ENST00000289957 NPTXRO95502 500 aa12.38□□□□□ -0.43
CHRNB3-201ENST00000289957 FGFR1OPO95684 399 aaKnown RBP12.38□□□□□ -0.43
CHRNB3-201ENST00000289957 ATP1A1P05023 1023 aaKnown RBP12.38□□□□□ -0.43
CHRNB3-201ENST00000289957 CXCL8P10145 99 aa12.38□□□□□ -0.43
CHRNB3-201ENST00000289957 DLATP10515 647 aaKnown RBP12.38□□□□□ -0.43
CHRNB3-201ENST00000289957 PSMC2P35998 433 aaKnown RBP12.38□□□□□ -0.43
CHRNB3-201ENST00000289957 AFF1P51825 1210 aaKnown RBP12.38□□□□□ -0.43
CHRNB3-201ENST00000289957 CCL23P55773 120 aa12.38□□□□□ -0.43
CHRNB3-201ENST00000289957 POU5F1BQ06416 359 aa12.38□□□□□ -0.43
CHRNB3-201ENST00000289957 HSP90B2PQ58FF3 399 aa12.38□□□□□ -0.43
CHRNB3-201ENST00000289957 FBXO47Q5MNV8 452 aa12.38□□□□□ -0.43
CHRNB3-201ENST00000289957 FKBP15Q5T1M5 1219 aa12.38□□□□□ -0.43
CHRNB3-201ENST00000289957 COL13A1Q5TAT6 717 aaPredicted RBP12.38□□□□□ -0.43
CHRNB3-201ENST00000289957 MPZL3Q6UWV2 235 aa12.38□□□□□ -0.43
CHRNB3-201ENST00000289957 SLC9A9Q8IVB4 645 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms