RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 CITO14578 2027 aa21.61■■□□□ 1.05
TIMP4-201ENST00000287814 SMC2O95347 1197 aa21.61■■□□□ 1.05
TIMP4-201ENST00000287814 EFEMP2O95967 443 aa21.61■■□□□ 1.05
TIMP4-201ENST00000287814 CLCNKBP51801 687 aa21.61■■□□□ 1.05
TIMP4-201ENST00000287814 PPP2R3AQ06190 1150 aa21.61■■□□□ 1.05
TIMP4-201ENST00000287814 CD300LGQ6UXG3 332 aa21.61■■□□□ 1.05
TIMP4-201ENST00000287814 TAS1R1Q7RTX1 841 aa21.61■■□□□ 1.05
TIMP4-201ENST00000287814 DDX53Q86TM3 631 aaKnown RBP21.61■■□□□ 1.05
TIMP4-201ENST00000287814 TLR9Q9NR96 1032 aa21.61■■□□□ 1.05
TIMP4-201ENST00000287814 TUBGCP4Q9UGJ1 667 aa21.61■■□□□ 1.05
TIMP4-201ENST00000287814 FSCN2O14926 492 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 EXTL3O43909 919 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 KIF4AO95239 1232 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 HSP90AA2PQ14568 343 aaPredicted RBP21.6■■□□□ 1.05
TIMP4-201ENST00000287814 CAMK4Q16566 473 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 ISM2Q6H9L7 571 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 JADE1Q6IE81 842 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 HASPINQ8TF76 798 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 NOC3LQ8WTT2 800 aaKnown RBP21.6■■□□□ 1.05
TIMP4-201ENST00000287814 KIF12Q96FN5 646 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 COLEC11Q9BWP8 271 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 CARNS1A5YM72 827 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 LDHAP00338 332 aaKnown RBP21.6■■□□□ 1.05
TIMP4-201ENST00000287814 GUCY2FP51841 1108 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 UPP1Q16831 310 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 TCEAL5Q5H9L2 206 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 HS2ST1Q7LGA3 356 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 ADGRD2Q7Z7M1 963 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 CBWD2Q8IUF1 395 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 VPS52Q8N1B4 723 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 GPD1LQ8N335 351 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 C3orf58Q8NDZ4 430 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 TCF25Q9BQ70 676 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 GPR62Q9BZJ7 368 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 SLC38A7Q9NVC3 462 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 RMND1Q9NWS8 449 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 MAN1B1Q9UKM7 699 aa21.6■■□□□ 1.05
TIMP4-201ENST00000287814 ATG2AQ2TAZ0 1938 aa21.59■■□□□ 1.05
TIMP4-201ENST00000287814 NFICP08651 508 aa21.59■■□□□ 1.05
TIMP4-201ENST00000287814 CYP2J2P51589 502 aa21.59■■□□□ 1.05
TIMP4-201ENST00000287814 SNRPFP62306 86 aaKnown RBP21.59■■□□□ 1.05
TIMP4-201ENST00000287814 POU5F1Q01860 360 aaKnown RBP21.59■■□□□ 1.05
TIMP4-201ENST00000287814 ZNF658Q5TYW1 1059 aaPredicted RBP21.59■■□□□ 1.05
TIMP4-201ENST00000287814 BRSK2Q8IWQ3 736 aa21.59■■□□□ 1.05
TIMP4-201ENST00000287814 C12orf56Q8IXR9 622 aa21.59■■□□□ 1.05
TIMP4-201ENST00000287814 RNF168Q8IYW5 571 aaPredicted RBP21.59■■□□□ 1.05
TIMP4-201ENST00000287814 GUF1Q8N442 669 aaKnown RBP21.59■■□□□ 1.05
TIMP4-201ENST00000287814 MICAL1Q8TDZ2 1067 aa21.59■■□□□ 1.05
TIMP4-201ENST00000287814 FBXL18Q96ME1 805 aa21.59■■□□□ 1.05
TIMP4-201ENST00000287814 ADAM28Q9UKQ2 775 aa21.59■■□□□ 1.05
TIMP4-201ENST00000287814 HIDE1A8MVS5 230 aa21.58■■□□□ 1.05
TIMP4-201ENST00000287814 BMP6P22004 513 aa21.58■■□□□ 1.05
TIMP4-201ENST00000287814 PRCPP42785 496 aa21.58■■□□□ 1.05
TIMP4-201ENST00000287814 PLPP4Q5VZY2 271 aa21.58■■□□□ 1.05
TIMP4-201ENST00000287814 TMC7Q7Z402 723 aa21.58■■□□□ 1.05
TIMP4-201ENST00000287814 CD302Q8IX05 232 aa21.58■■□□□ 1.05
TIMP4-201ENST00000287814 EFCAB13Q8IY85 973 aa21.58■■□□□ 1.05
TIMP4-201ENST00000287814 RDH13Q8NBN7 331 aa21.58■■□□□ 1.05
TIMP4-201ENST00000287814 AUTS2Q8WXX7 1259 aa21.58■■□□□ 1.05
TIMP4-201ENST00000287814 FAM84AQ96KN4 292 aa21.58■■□□□ 1.05
TIMP4-201ENST00000287814 ZBP1Q9H171 429 aa21.58■■□□□ 1.05
TIMP4-201ENST00000287814 NSUN3Q9H649 340 aaKnown RBP21.58■■□□□ 1.05
TIMP4-201ENST00000287814 ASB7Q9H672 318 aa21.58■■□□□ 1.05
TIMP4-201ENST00000287814 DMAC2Q9NW81 257 aa21.58■■□□□ 1.05
TIMP4-201ENST00000287814 RBAKQ9NYW8 714 aaPredicted RBP21.58■■□□□ 1.05
TIMP4-201ENST00000287814 XIRP2A4UGR9 3374 aa21.58■■□□□ 1.04
TIMP4-201ENST00000287814 PDXKO00764 312 aa21.57■■□□□ 1.04
TIMP4-201ENST00000287814 KIAA0391O15091 583 aaKnown RBP21.57■■□□□ 1.04
TIMP4-201ENST00000287814 TADA2AO75478 443 aa21.57■■□□□ 1.04
TIMP4-201ENST00000287814 DCLRE1AQ6PJP8 1040 aa21.57■■□□□ 1.04
TIMP4-201ENST00000287814 GPT2Q8TD30 523 aa21.57■■□□□ 1.04
TIMP4-201ENST00000287814 UROC1Q96N76 676 aa21.57■■□□□ 1.04
TIMP4-201ENST00000287814 PDE11AQ9HCR9 933 aa21.57■■□□□ 1.04
TIMP4-201ENST00000287814 CGNQ9P2M7 1197 aaKnown RBP21.57■■□□□ 1.04
TIMP4-201ENST00000287814 PODXLO00592 558 aa21.56■■□□□ 1.04
TIMP4-201ENST00000287814 B3GAT3O94766 335 aa21.56■■□□□ 1.04
TIMP4-201ENST00000287814 GTF2F1P35269 517 aaKnown RBP eCLIP21.56■■□□□ 1.04
TIMP4-201ENST00000287814 TIGD5Q53EQ6 642 aa21.56■■□□□ 1.04
TIMP4-201ENST00000287814 SPATA1Q5VX52 437 aa21.56■■□□□ 1.04
TIMP4-201ENST00000287814 FUT10Q6P4F1 479 aa21.56■■□□□ 1.04
TIMP4-201ENST00000287814 XXYLT1Q8NBI6 393 aa21.56■■□□□ 1.04
TIMP4-201ENST00000287814 B3GALT6Q96L58 329 aa21.56■■□□□ 1.04
TIMP4-201ENST00000287814 ENTPD7Q9NQZ7 604 aa21.56■■□□□ 1.04
TIMP4-201ENST00000287814 UBQLN1Q9UMX0 589 aaKnown RBP21.56■■□□□ 1.04
TIMP4-201ENST00000287814 TRAF3IP3Q9Y228 551 aa21.56■■□□□ 1.04
TIMP4-201ENST00000287814 ZNF233A6NK53 670 aa21.56■■□□□ 1.04
TIMP4-201ENST00000287814 TULP1O00294 542 aaPredicted RBP21.56■■□□□ 1.04
TIMP4-201ENST00000287814 BIN1O00499 593 aa21.56■■□□□ 1.04
TIMP4-201ENST00000287814 SLC34A2O95436 690 aa21.56■■□□□ 1.04
TIMP4-201ENST00000287814 CTSAP10619 480 aa21.56■■□□□ 1.04
TIMP4-201ENST00000287814 TMEM132DQ14C87 1099 aa21.56■■□□□ 1.04
TIMP4-201ENST00000287814 MRPL43Q8N983 215 aaKnown RBP21.56■■□□□ 1.04
TIMP4-201ENST00000287814 GOLGA5Q8TBA6 731 aa21.56■■□□□ 1.04
TIMP4-201ENST00000287814 DDX27Q96GQ7 796 aaKnown RBP21.56■■□□□ 1.04
TIMP4-201ENST00000287814 CLSTN2Q9H4D0 955 aa21.56■■□□□ 1.04
TIMP4-201ENST00000287814 NGRNQ9NPE2 291 aaKnown RBP21.56■■□□□ 1.04
TIMP4-201ENST00000287814 PRDM6Q9NQX0 595 aa21.56■■□□□ 1.04
TIMP4-201ENST00000287814 DERAQ9Y315 318 aa21.56■■□□□ 1.04
TIMP4-201ENST00000287814 TMEM189-UBE2V1I3L0A0 370 aa21.55■■□□□ 1.04
TIMP4-201ENST00000287814 PER2O15055 1255 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms