RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 PITPNM2Q9BZ72 1349 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 TMEM247A6NEH6 219 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 TRAFD1O14545 582 aaPredicted RBP9.33□□□□□ -0.92
VAPB-201ENST00000265619 LRRC8BQ6P9F7 803 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 BTNL9Q6UXG8 535 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 RBM44Q6ZP01 1051 aaKnown RBP9.33□□□□□ -0.92
VAPB-201ENST00000265619 TTC7BQ86TV6 843 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 METTL25Q8N6Q8 603 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 OLIG1Q8TAK6 271 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 WDR66Q8TBY9 1149 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 KRT35Q92764 455 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 ECSITQ9BQ95 431 aa9.33□□□□□ -0.92
VAPB-201ENST00000265619 SUCLA2Q9P2R7 463 aaPredicted RBP9.33□□□□□ -0.92
VAPB-201ENST00000265619 CFAP69A5D8W1 941 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 LSM1O15116 133 aaKnown RBP9.32□□□□□ -0.92
VAPB-201ENST00000265619 MAPK13O15264 365 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 ATP2B4P23634 1241 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 CD97P48960 835 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 TFAP4Q01664 338 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 WDR78Q5VTH9 848 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 RNF111Q6ZNA4 994 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 CLNKQ7Z7G1 428 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 CCDC125Q86Z20 511 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 CEP70Q8NHQ1 597 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 U2AF1L4Q8WU68 220 aaKnown RBP9.32□□□□□ -0.92
VAPB-201ENST00000265619 HAUS1Q96CS2 278 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 FAM81BQ96LP2 452 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 NR1H4Q96RI1 486 aaPredicted RBP9.32□□□□□ -0.92
VAPB-201ENST00000265619 UNC45AQ9H3U1 944 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 NPHS2Q9NP85 383 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 DCP1AQ9NPI6 582 aaPredicted RBP9.32□□□□□ -0.92
VAPB-201ENST00000265619 FBXO6Q9NRD1 293 aaPredicted RBP9.32□□□□□ -0.92
VAPB-201ENST00000265619 ZFP69BQ9UJL9 534 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 E2F6O75461 281 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 BBOX1O75936 387 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 XBP1P17861 261 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 ABCB4P21439 1286 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 PSMD7P51665 324 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 TBL3Q12788 808 aaKnown RBP9.32□□□□□ -0.92
VAPB-201ENST00000265619 R3HDM1Q15032 1099 aaKnown RBP9.32□□□□□ -0.92
VAPB-201ENST00000265619 CABP7Q86V35 215 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 SCYL3Q8IZE3 742 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 MKL1Q969V6 931 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 ARHGEF26Q96DR7 871 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 TTC1Q99614 292 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 RIOK1Q9BRS2 568 aaKnown RBP9.32□□□□□ -0.92
VAPB-201ENST00000265619 BRIP1Q9BX63 1249 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 TFPTP0C1Z6 253 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 TSPY3P0CV98 308 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 TSPY8P0CW00 308 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 RARGP13631 454 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 TROAPQ12815 778 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 MSLNQ13421 630 aaPredicted RBP9.32□□□□□ -0.92
VAPB-201ENST00000265619 SLC44A4Q53GD3 710 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 SFT2D3Q587I9 215 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 NLRP9Q7RTR0 991 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 ZNF444Q8N0Y2 327 aaPredicted RBP9.32□□□□□ -0.92
VAPB-201ENST00000265619 ZNF653Q96CK0 615 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 CLIP3Q96DZ5 547 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 PTCD3Q96EY7 689 aaKnown RBP9.32□□□□□ -0.92
VAPB-201ENST00000265619 ABHD8Q96I13 439 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 DHRS1Q96LJ7 313 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 UIMC1Q96RL1 719 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 USP40Q9NVE5 1235 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 NAALADL1Q9UQQ1 740 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 NUB1Q9Y5A7 615 aa9.32□□□□□ -0.92
VAPB-201ENST00000265619 DLG1Q12959 904 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 ACAP1Q15027 740 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 KLHDC10Q6PID8 442 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 OTOAQ7RTW8 1153 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 NELFCDQ8IXH7 590 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 CDK5RAP3Q96JB5 506 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 ZNF512BQ96KM6 892 aaPredicted RBP9.31□□□□□ -0.92
VAPB-201ENST00000265619 FNBP1Q96RU3 617 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 C7orf25Q9BPX7 421 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 RNF41Q9H4P4 317 aaPredicted RBP9.31□□□□□ -0.92
VAPB-201ENST00000265619 ZNF277Q9NRM2 450 aaPredicted RBP9.31□□□□□ -0.92
VAPB-201ENST00000265619 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.31□□□□□ -0.92
VAPB-201ENST00000265619 TAS2R1Q9NYW7 299 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 DOLKQ9UPQ8 538 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 THSD7AQ9UPZ6 1657 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 BTNL10A8MVZ5 291 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 ZBED4O75132 1171 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 ATP5HO75947 161 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 BAG2O95816 211 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 LMNAP02545 664 aaKnown RBP9.31□□□□□ -0.92
VAPB-201ENST00000265619 SMIM18P0DKX4 95 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 ANPEPP15144 967 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 NPR1P16066 1061 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 MAP3K10Q02779 954 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 BTKQ06187 659 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 CD300CQ08708 224 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 ZYXQ15942 572 aaKnown RBP9.31□□□□□ -0.92
VAPB-201ENST00000265619 GSTA3Q16772 222 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 KCTD21Q4G0X4 260 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 LPCAT4Q643R3 524 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 ARL6IP4Q66PJ3 421 aaKnown RBP9.31□□□□□ -0.92
VAPB-201ENST00000265619 FBXL19Q6PCT2 694 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 AKT1S1Q96B36 256 aa9.31□□□□□ -0.92
VAPB-201ENST00000265619 POLR3CQ9BUI4 534 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms