RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 XKR4Q5GH76 650 aa19.92■□□□□ 0.78
SDF4-201ENST00000263741 CEP135Q66GS9 1140 aa19.92■□□□□ 0.78
SDF4-201ENST00000263741 KCNT2Q6UVM3 1135 aa19.92■□□□□ 0.78
SDF4-201ENST00000263741 RBM43Q6ZSC3 357 aaKnown RBP19.92■□□□□ 0.78
SDF4-201ENST00000263741 BRSK2Q8IWQ3 736 aa19.92■□□□□ 0.78
SDF4-201ENST00000263741 C12orf56Q8IXR9 622 aa19.92■□□□□ 0.78
SDF4-201ENST00000263741 COLGALT2Q8IYK4 626 aa19.92■□□□□ 0.78
SDF4-201ENST00000263741 GOLGA5Q8TBA6 731 aa19.92■□□□□ 0.78
SDF4-201ENST00000263741 BCL7CQ8WUZ0 217 aaPredicted RBP19.92■□□□□ 0.78
SDF4-201ENST00000263741 NELFBQ8WX92 580 aa19.92■□□□□ 0.78
SDF4-201ENST00000263741 KIF12Q96FN5 646 aa19.92■□□□□ 0.78
SDF4-201ENST00000263741 PRDM12Q9H4Q4 367 aa19.92■□□□□ 0.78
SDF4-201ENST00000263741 KANSL3Q9P2N6 904 aa19.92■□□□□ 0.78
SDF4-201ENST00000263741 ESPNB1AK53 854 aa19.91■□□□□ 0.78
SDF4-201ENST00000263741 PSMA7O14818 248 aa19.91■□□□□ 0.78
SDF4-201ENST00000263741 LAG3P18627 525 aa19.91■□□□□ 0.78
SDF4-201ENST00000263741 IGFBP6P24592 240 aaPredicted RBP19.91■□□□□ 0.78
SDF4-201ENST00000263741 OR1G1P47890 313 aa19.91■□□□□ 0.78
SDF4-201ENST00000263741 STIM1Q13586 685 aa19.91■□□□□ 0.78
SDF4-201ENST00000263741 KYAT1Q16773 422 aa19.91■□□□□ 0.78
SDF4-201ENST00000263741 LMBRD2Q68DH5 695 aaPredicted RBP19.91■□□□□ 0.78
SDF4-201ENST00000263741 ANKRD40Q6AI12 368 aa19.91■□□□□ 0.78
SDF4-201ENST00000263741 EFCAB13Q8IY85 973 aa19.91■□□□□ 0.78
SDF4-201ENST00000263741 HASPINQ8TF76 798 aa19.91■□□□□ 0.78
SDF4-201ENST00000263741 P2RX5Q93086 422 aa19.91■□□□□ 0.78
SDF4-201ENST00000263741 ZNF558Q96NG5 402 aa19.91■□□□□ 0.78
SDF4-201ENST00000263741 PDE11AQ9HCR9 933 aa19.91■□□□□ 0.78
SDF4-201ENST00000263741 VWA8A3KMH1 1905 aa19.91■□□□□ 0.78
SDF4-201ENST00000263741 BMPR1AP36894 532 aa19.91■□□□□ 0.78
SDF4-201ENST00000263741 CENPPQ6IPU0 288 aa19.91■□□□□ 0.78
SDF4-201ENST00000263741 KLHL23Q8NBE8 558 aa19.91■□□□□ 0.78
SDF4-201ENST00000263741 FBXO22Q8NEZ5 403 aa19.91■□□□□ 0.78
SDF4-201ENST00000263741 FBXL18Q96ME1 805 aa19.91■□□□□ 0.78
SDF4-201ENST00000263741 DMAC2Q9NW81 257 aa19.91■□□□□ 0.78
SDF4-201ENST00000263741 CGNQ9P2M7 1197 aaKnown RBP19.91■□□□□ 0.78
SDF4-201ENST00000263741 PTPRJQ12913 1337 aa19.91■□□□□ 0.78
SDF4-201ENST00000263741 PRRC2BQ5JSZ5 2229 aaKnown RBP19.91■□□□□ 0.78
SDF4-201ENST00000263741 LDHAP00338 332 aaKnown RBP19.9■□□□□ 0.78
SDF4-201ENST00000263741 GALTP07902 379 aa19.9■□□□□ 0.78
SDF4-201ENST00000263741 KCNE1P15382 129 aa19.9■□□□□ 0.78
SDF4-201ENST00000263741 SNRPFP62306 86 aaKnown RBP19.9■□□□□ 0.78
SDF4-201ENST00000263741 TUSC3Q13454 348 aa19.9■□□□□ 0.78
SDF4-201ENST00000263741 ALG13Q9NP73 1137 aaKnown RBP19.9■□□□□ 0.78
SDF4-201ENST00000263741 ZNF233A6NK53 670 aa19.9■□□□□ 0.78
SDF4-201ENST00000263741 ITGB1P05556 798 aa19.9■□□□□ 0.78
SDF4-201ENST00000263741 CCNE1P24864 410 aa19.9■□□□□ 0.78
SDF4-201ENST00000263741 CCDC127Q96BQ5 260 aa19.9■□□□□ 0.78
SDF4-201ENST00000263741 PLEKHA5Q9HAU0 1116 aa19.9■□□□□ 0.78
SDF4-201ENST00000263741 MARCH5Q9NX47 278 aa19.9■□□□□ 0.78
SDF4-201ENST00000263741 NRP1O14786 923 aa19.89■□□□□ 0.77
SDF4-201ENST00000263741 KIAA0391O15091 583 aaKnown RBP19.89■□□□□ 0.77
SDF4-201ENST00000263741 ALDH7A1P49419 539 aaKnown RBP19.89■□□□□ 0.77
SDF4-201ENST00000263741 NLRP12P59046 1061 aa19.89■□□□□ 0.77
SDF4-201ENST00000263741 PAK1Q13153 545 aa19.89■□□□□ 0.77
SDF4-201ENST00000263741 PLEKHO2Q8TD55 490 aa19.89■□□□□ 0.77
SDF4-201ENST00000263741 DHTKD1Q96HY7 919 aaPredicted RBP19.89■□□□□ 0.77
SDF4-201ENST00000263741 PCDHB12Q9Y5F1 795 aa19.89■□□□□ 0.77
SDF4-201ENST00000263741 AKAP3O75969 853 aa19.88■□□□□ 0.77
SDF4-201ENST00000263741 CLCNKBP51801 687 aa19.88■□□□□ 0.77
SDF4-201ENST00000263741 CYP24A1Q07973 514 aa19.88■□□□□ 0.77
SDF4-201ENST00000263741 TMEM132DQ14C87 1099 aa19.88■□□□□ 0.77
SDF4-201ENST00000263741 ZSCAN23Q3MJ62 389 aa19.88■□□□□ 0.77
SDF4-201ENST00000263741 SCARA3Q6AZY7 606 aa19.88■□□□□ 0.77
SDF4-201ENST00000263741 SLC9A9Q8IVB4 645 aa19.88■□□□□ 0.77
SDF4-201ENST00000263741 SLC39A11Q8N1S5 342 aa19.88■□□□□ 0.77
SDF4-201ENST00000263741 DEFB123Q8N688 67 aa19.88■□□□□ 0.77
SDF4-201ENST00000263741 RSPH1Q8WYR4 309 aa19.88■□□□□ 0.77
SDF4-201ENST00000263741 MED15Q96RN5 788 aa19.88■□□□□ 0.77
SDF4-201ENST00000263741 POP1Q99575 1024 aaKnown RBP19.88■□□□□ 0.77
SDF4-201ENST00000263741 TSG101Q99816 390 aa19.88■□□□□ 0.77
SDF4-201ENST00000263741 GTPBP4Q9BZE4 634 aaKnown RBP19.88■□□□□ 0.77
SDF4-201ENST00000263741 AAASQ9NRG9 546 aa19.88■□□□□ 0.77
SDF4-201ENST00000263741 GRM6O15303 877 aa19.88■□□□□ 0.77
SDF4-201ENST00000263741 FGF18O76093 207 aa19.88■□□□□ 0.77
SDF4-201ENST00000263741 KIF4AO95239 1232 aa19.88■□□□□ 0.77
SDF4-201ENST00000263741 DLATP10515 647 aaKnown RBP19.88■□□□□ 0.77
SDF4-201ENST00000263741 ADAM9Q13443 819 aa19.88■□□□□ 0.77
SDF4-201ENST00000263741 TTI2Q6NXR4 508 aa19.88■□□□□ 0.77
SDF4-201ENST00000263741 C3orf58Q8NDZ4 430 aa19.88■□□□□ 0.77
SDF4-201ENST00000263741 PPP1R9BQ96SB3 815 aa19.88■□□□□ 0.77
SDF4-201ENST00000263741 DUSP9Q99956 384 aaKnown RBP19.88■□□□□ 0.77
SDF4-201ENST00000263741 FAN1Q9Y2M0 1017 aa19.88■□□□□ 0.77
SDF4-201ENST00000263741 TMEM265A0A087WTH1 108 aa19.87■□□□□ 0.77
SDF4-201ENST00000263741 PPEF2O14830 753 aa19.87■□□□□ 0.77
SDF4-201ENST00000263741 IL18RAPO95256 599 aa19.87■□□□□ 0.77
SDF4-201ENST00000263741 DNAJB1P25685 340 aa19.87■□□□□ 0.77
SDF4-201ENST00000263741 TFAMQ00059 246 aaKnown RBP19.87■□□□□ 0.77
SDF4-201ENST00000263741 GPM6BQ13491 265 aa19.87■□□□□ 0.77
SDF4-201ENST00000263741 ZBTB6Q15916 424 aa19.87■□□□□ 0.77
SDF4-201ENST00000263741 EDRF1Q3B7T1 1238 aa19.87■□□□□ 0.77
SDF4-201ENST00000263741 TMEM175Q9BSA9 504 aa19.87■□□□□ 0.77
SDF4-201ENST00000263741 VN1R3Q9BXE9 311 aa19.87■□□□□ 0.77
SDF4-201ENST00000263741 RWDD3Q9Y3V2 267 aa19.87■□□□□ 0.77
SDF4-201ENST00000263741 C5orf67F2Z3F1 127 aa19.87■□□□□ 0.77
SDF4-201ENST00000263741 LPXNO60711 386 aa19.87■□□□□ 0.77
SDF4-201ENST00000263741 LRRC63Q05C16 580 aa19.87■□□□□ 0.77
SDF4-201ENST00000263741 OR5B17Q8NGF7 314 aa19.87■□□□□ 0.77
SDF4-201ENST00000263741 SYAP1Q96A49 352 aaPredicted RBP19.87■□□□□ 0.77
SDF4-201ENST00000263741 SAMD11Q96NU1 681 aa19.87■□□□□ 0.77
SDF4-201ENST00000263741 MTMR12Q9C0I1 747 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms