RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 CA12O43570 354 aa17■□□□□ 0.31
VPS26A-201ENST00000263559 ZEB2O60315 1214 aa17■□□□□ 0.31
VPS26A-201ENST00000263559 CST3P01034 146 aaPredicted RBP17■□□□□ 0.31
VPS26A-201ENST00000263559 TMEM253P0C7T8 217 aa17■□□□□ 0.31
VPS26A-201ENST00000263559 KRT5P13647 590 aa17■□□□□ 0.31
VPS26A-201ENST00000263559 AP3M2P53677 418 aa17■□□□□ 0.31
VPS26A-201ENST00000263559 TMEM192Q8IY95 271 aa17■□□□□ 0.31
VPS26A-201ENST00000263559 COG1Q8WTW3 980 aa17■□□□□ 0.31
VPS26A-201ENST00000263559 RABGGTAQ92696 567 aa17■□□□□ 0.31
VPS26A-201ENST00000263559 CPB2Q96IY4 423 aa17■□□□□ 0.31
VPS26A-201ENST00000263559 PSMB7Q99436 277 aa17■□□□□ 0.31
VPS26A-201ENST00000263559 HYOU1Q9Y4L1 999 aa17■□□□□ 0.31
VPS26A-201ENST00000263559 PCNTO95613 3336 aa17■□□□□ 0.31
VPS26A-201ENST00000263559 MMEP08473 750 aa17■□□□□ 0.31
VPS26A-201ENST00000263559 SMIM10L2AP0DMW4 78 aa17■□□□□ 0.31
VPS26A-201ENST00000263559 SMIM10L2BP0DMW5 78 aa17■□□□□ 0.31
VPS26A-201ENST00000263559 ZSCAN20P17040 1043 aaPredicted RBP17■□□□□ 0.31
VPS26A-201ENST00000263559 CXCR5P32302 372 aa17■□□□□ 0.31
VPS26A-201ENST00000263559 NCOA4Q13772 614 aa17■□□□□ 0.31
VPS26A-201ENST00000263559 SURF1Q15526 300 aa17■□□□□ 0.31
VPS26A-201ENST00000263559 PDCL2Q8N4E4 241 aa17■□□□□ 0.31
VPS26A-201ENST00000263559 SCLT1Q96NL6 688 aa17■□□□□ 0.31
VPS26A-201ENST00000263559 MTMR12Q9C0I1 747 aa17■□□□□ 0.31
VPS26A-201ENST00000263559 TMEM88BA6NKF7 163 aa16.99■□□□□ 0.31
VPS26A-201ENST00000263559 PDE2AO00408 941 aaPredicted RBP16.99■□□□□ 0.31
VPS26A-201ENST00000263559 BEX3Q00994 111 aa16.99■□□□□ 0.31
VPS26A-201ENST00000263559 FMO1Q01740 532 aa16.99■□□□□ 0.31
VPS26A-201ENST00000263559 IFI16Q16666 785 aaKnown RBP16.99■□□□□ 0.31
VPS26A-201ENST00000263559 MEI1Q5TIA1 1274 aa16.99■□□□□ 0.31
VPS26A-201ENST00000263559 FBXO38Q6PIJ6 1188 aa16.99■□□□□ 0.31
VPS26A-201ENST00000263559 PAXIP1Q6ZW49 1069 aaPredicted RBP16.99■□□□□ 0.31
VPS26A-201ENST00000263559 CREG2Q8IUH2 290 aa16.99■□□□□ 0.31
VPS26A-201ENST00000263559 TPCN2Q8NHX9 752 aa16.99■□□□□ 0.31
VPS26A-201ENST00000263559 CTNNBL1Q8WYA6 563 aaPredicted RBP16.99■□□□□ 0.31
VPS26A-201ENST00000263559 THAP2Q9H0W7 228 aa16.99■□□□□ 0.31
VPS26A-201ENST00000263559 ISCUQ9H1K1 167 aa16.99■□□□□ 0.31
VPS26A-201ENST00000263559 NUB1Q9Y5A7 615 aa16.99■□□□□ 0.31
VPS26A-201ENST00000263559 ANKRD62A6NC57 917 aa16.99■□□□□ 0.31
VPS26A-201ENST00000263559 KIF3CO14782 793 aa16.99■□□□□ 0.31
VPS26A-201ENST00000263559 CALCAP01258 141 aa16.99■□□□□ 0.31
VPS26A-201ENST00000263559 TCP1P17987 556 aaKnown RBP16.99■□□□□ 0.31
VPS26A-201ENST00000263559 ARF4P18085 180 aaPredicted RBP16.99■□□□□ 0.31
VPS26A-201ENST00000263559 PDE6CP51160 858 aa16.99■□□□□ 0.31
VPS26A-201ENST00000263559 DUOXA2Q1HG44 320 aa16.99■□□□□ 0.31
VPS26A-201ENST00000263559 CYP4F22Q6NT55 531 aa16.99■□□□□ 0.31
VPS26A-201ENST00000263559 GPR161Q8N6U8 529 aaKnown RBP16.99■□□□□ 0.31
VPS26A-201ENST00000263559 LRRC57Q8N9N7 239 aa16.99■□□□□ 0.31
VPS26A-201ENST00000263559 SLC35G2Q8TBE7 412 aa16.99■□□□□ 0.31
VPS26A-201ENST00000263559 DDX1Q92499 740 aaKnown RBP16.99■□□□□ 0.31
VPS26A-201ENST00000263559 ARHGAP39Q9C0H5 1083 aa16.99■□□□□ 0.31
VPS26A-201ENST00000263559 GOLPH3Q9H4A6 298 aa16.99■□□□□ 0.31
VPS26A-201ENST00000263559 PDZD7Q9H5P4 517 aa16.99■□□□□ 0.31
VPS26A-201ENST00000263559 PACSIN2Q9UNF0 486 aaPredicted RBP16.99■□□□□ 0.31
VPS26A-201ENST00000263559 UMODL1Q5DID0 1318 aa16.98■□□□□ 0.31
VPS26A-201ENST00000263559 NRCAMQ92823 1304 aa16.98■□□□□ 0.31
VPS26A-201ENST00000263559 FTLP02792 175 aaPredicted RBP16.98■□□□□ 0.31
VPS26A-201ENST00000263559 NOP14P78316 857 aaKnown RBP16.98■□□□□ 0.31
VPS26A-201ENST00000263559 CDR2Q01850 454 aa16.98■□□□□ 0.31
VPS26A-201ENST00000263559 CUL2Q13617 745 aa16.98■□□□□ 0.31
VPS26A-201ENST00000263559 MFSD10Q14728 455 aa16.98■□□□□ 0.31
VPS26A-201ENST00000263559 SMC1BQ8NDV3 1235 aa16.98■□□□□ 0.31
VPS26A-201ENST00000263559 ARHGEF26Q96DR7 871 aa16.98■□□□□ 0.31
VPS26A-201ENST00000263559 FAM49AQ9H0Q0 323 aaPredicted RBP16.98■□□□□ 0.31
VPS26A-201ENST00000263559 AP5M1Q9H0R1 490 aa16.98■□□□□ 0.31
VPS26A-201ENST00000263559 OSGEPQ9NPF4 335 aa16.98■□□□□ 0.31
VPS26A-201ENST00000263559 TSKSQ9UJT2 592 aa16.98■□□□□ 0.31
VPS26A-201ENST00000263559 NCANO14594 1321 aa16.98■□□□□ 0.31
VPS26A-201ENST00000263559 TRIP12Q14669 1992 aaPredicted RBP16.98■□□□□ 0.31
VPS26A-201ENST00000263559 MYL3P08590 195 aa16.98■□□□□ 0.31
VPS26A-201ENST00000263559 CLTAP09496 248 aa16.98■□□□□ 0.31
VPS26A-201ENST00000263559 CXCL8P10145 99 aa16.98■□□□□ 0.31
VPS26A-201ENST00000263559 ACO1P21399 889 aaKnown RBP16.98■□□□□ 0.31
VPS26A-201ENST00000263559 CPT1AP50416 773 aa16.98■□□□□ 0.31
VPS26A-201ENST00000263559 TFAMQ00059 246 aaKnown RBP16.98■□□□□ 0.31
VPS26A-201ENST00000263559 TMEM62Q0P6H9 643 aa16.98■□□□□ 0.31
VPS26A-201ENST00000263559 HIC1Q14526 733 aa16.98■□□□□ 0.31
VPS26A-201ENST00000263559 KIZQ2M2Z5 673 aa16.98■□□□□ 0.31
VPS26A-201ENST00000263559 EFCAB13Q8IY85 973 aa16.98■□□□□ 0.31
VPS26A-201ENST00000263559 NOA1Q8NC60 698 aaKnown RBP16.98■□□□□ 0.31
VPS26A-201ENST00000263559 RPF1Q9H9Y2 349 aaKnown RBP16.98■□□□□ 0.31
VPS26A-201ENST00000263559 Q9Y3F1 56 aa16.98■□□□□ 0.31
VPS26A-201ENST00000263559 B4GALT4O60513 344 aa16.97■□□□□ 0.31
VPS26A-201ENST00000263559 RTN2O75298 545 aa16.97■□□□□ 0.31
VPS26A-201ENST00000263559 CLSTN1O94985 981 aa16.97■□□□□ 0.31
VPS26A-201ENST00000263559 MCF2P10911 925 aa16.97■□□□□ 0.31
VPS26A-201ENST00000263559 H2AFXP16104 143 aaPredicted RBP16.97■□□□□ 0.31
VPS26A-201ENST00000263559 PSEN2P49810 448 aa16.97■□□□□ 0.31
VPS26A-201ENST00000263559 CKAP4Q07065 602 aaKnown RBP16.97■□□□□ 0.31
VPS26A-201ENST00000263559 ZNF410Q86VK4 478 aa16.97■□□□□ 0.31
VPS26A-201ENST00000263559 CAGE1Q8TC20 777 aa16.97■□□□□ 0.31
VPS26A-201ENST00000263559 RFFLQ8WZ73 363 aa16.97■□□□□ 0.31
VPS26A-201ENST00000263559 HHIPL1Q96JK4 782 aa16.97■□□□□ 0.31
VPS26A-201ENST00000263559 HAS3O00219 553 aa16.97■□□□□ 0.31
VPS26A-201ENST00000263559 TSPAN1O60635 241 aa16.97■□□□□ 0.31
VPS26A-201ENST00000263559 TBC1D8O95759 1140 aa16.97■□□□□ 0.31
VPS26A-201ENST00000263559 STAG3L1P0CL83 205 aa16.97■□□□□ 0.31
VPS26A-201ENST00000263559 GZMAP12544 262 aa16.97■□□□□ 0.31
VPS26A-201ENST00000263559 FGFR4P22455 802 aa16.97■□□□□ 0.31
VPS26A-201ENST00000263559 PSMC4P43686 418 aa16.97■□□□□ 0.31
VPS26A-201ENST00000263559 TRPV1Q8NER1 839 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms