RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 TP73O15350 636 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 AGTP01019 485 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 ATF7P17544 494 aaPredicted RBP9.74□□□□□ -0.85
MSH4-201ENST00000263187 RPS6P62753 249 aaKnown RBP9.74□□□□□ -0.85
MSH4-201ENST00000263187 KRT39Q6A163 491 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 PARD3BQ8TEW8 1205 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 CD101Q93033 1021 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 FAM212AQ96EL1 285 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 CEP170P1Q96L14 293 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 RANBP17Q9H2T7 1088 aaKnown RBP9.74□□□□□ -0.85
MSH4-201ENST00000263187 ECT2Q9H8V3 914 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 NOD2Q9HC29 1040 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 TBX20Q9UMR3 447 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 CDR2Q01850 454 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 MYO1EQ12965 1108 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 SLC17A8Q8NDX2 589 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 FBXL13Q8NEE6 735 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 ZNF668Q96K58 619 aaPredicted RBP9.74□□□□□ -0.85
MSH4-201ENST00000263187 STRA6Q9BX79 667 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 EHMT1Q9H9B1 1298 aa9.74□□□□□ -0.85
MSH4-201ENST00000263187 AGO4Q9HCK5 861 aaKnown RBP9.74□□□□□ -0.85
MSH4-201ENST00000263187 CTDP1Q9Y5B0 961 aaPredicted RBP9.74□□□□□ -0.85
MSH4-201ENST00000263187 ASTN2O75129 1339 aaPredicted RBP9.74□□□□□ -0.85
MSH4-201ENST00000263187 IGF2BP3O00425 579 aaKnown RBP eCLIP9.73□□□□□ -0.85
MSH4-201ENST00000263187 SLC26A4O43511 780 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 SKAP2O75563 359 aaPredicted RBP9.73□□□□□ -0.85
MSH4-201ENST00000263187 ATP6V1G2O95670 118 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 ATF2P15336 505 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 STX2P32856 288 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 TAS2R40P59535 323 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 RNASELQ05823 741 aaKnown RBP9.73□□□□□ -0.85
MSH4-201ENST00000263187 SLMAPQ14BN4 828 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 PRAMEF18Q5VWM3 479 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 SLC39A4Q6P5W5 647 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 VSTM1Q6UX27 236 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 C4orf33Q8N1A6 199 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 KCNV2Q8TDN2 545 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 ZBTB45Q96K62 511 aaPredicted RBP9.73□□□□□ -0.85
MSH4-201ENST00000263187 RMDN2Q96LZ7 410 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 RMDN3Q96TC7 470 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 ANKFY1Q9P2R3 1169 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 SAE1Q9UBE0 346 aaPredicted RBP9.73□□□□□ -0.85
MSH4-201ENST00000263187 GABBR1Q9UBS5 961 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 ADGRA3Q8IWK6 1321 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 ATXN2Q99700 1313 aaKnown RBP9.73□□□□□ -0.85
MSH4-201ENST00000263187 WDR91A4D1P6 747 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 SPDYE2BA6NHP3 402 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 PEX10O60683 326 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 IFNB1P01574 187 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 SPDYE6P0CI01 402 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 CAP2P40123 477 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 PLCB3Q01970 1234 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 DMP1Q13316 513 aaPredicted RBP9.73□□□□□ -0.85
MSH4-201ENST00000263187 FASTKD3Q14CZ7 662 aaKnown RBP9.73□□□□□ -0.85
MSH4-201ENST00000263187 ZBTB41Q5SVQ8 909 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 TMEM270Q6UE05 265 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 ANO5Q75V66 913 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 TAOK1Q7L7X3 1001 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 PIGWQ7Z7B1 504 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 SLC9A9Q8IVB4 645 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 OGFOD1Q8N543 542 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 PSPC1Q8WXF1 523 aaKnown RBP9.73□□□□□ -0.85
MSH4-201ENST00000263187 SHC3Q92529 594 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 TGS1Q96RS0 853 aaKnown RBP9.73□□□□□ -0.85
MSH4-201ENST00000263187 RPS6KC1Q96S38 1066 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 C12orf65Q9H3J6 166 aaKnown RBP9.73□□□□□ -0.85
MSH4-201ENST00000263187 ZNF536O15090 1300 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 MROH7Q68CQ1 1323 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 SNX3O60493 162 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 UPP2O95045 317 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 GBP2P32456 591 aaPredicted RBP9.73□□□□□ -0.85
MSH4-201ENST00000263187 DYNLT1P63172 113 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 PPP2R5EQ16537 467 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 ACAD10Q6JQN1 1059 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 SWSAP1Q6NVH7 229 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 ZNF365Q70YC5 407 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 TMEM161BQ8NDZ6 487 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 FHDC1Q9C0D6 1143 aaPredicted RBP9.73□□□□□ -0.85
MSH4-201ENST00000263187 KDM4CQ9H3R0 1056 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 GTF3C4Q9UKN8 822 aa9.73□□□□□ -0.85
MSH4-201ENST00000263187 UMODL1Q5DID0 1318 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 GRIN3BO60391 1043 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 ENTPD3O75355 529 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 CYP1A2P05177 515 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 DRP2Q13474 957 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 TMEM130Q8N3G9 435 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 LARGE2Q8N3Y3 721 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 SYTL5Q8TDW5 730 aaPredicted RBP9.72□□□□□ -0.85
MSH4-201ENST00000263187 ZNF516Q92618 1163 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 TMEM143Q96AN5 459 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 RIT2Q99578 217 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 ALG13Q9NP73 1137 aaKnown RBP9.72□□□□□ -0.85
MSH4-201ENST00000263187 SLCO1B3Q9NPD5 702 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 HOMER3Q9NSC5 361 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 NINJ2Q9NZG7 142 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 PARP2Q9UGN5 583 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 SEPT9Q9UHD8 586 aaPredicted RBP9.72□□□□□ -0.85
MSH4-201ENST00000263187 NAALADL1Q9UQQ1 740 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 RIPK3Q9Y572 518 aa9.72□□□□□ -0.85
MSH4-201ENST00000263187 CEP83Q9Y592 693 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms