RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 MIF4GDA9UHW6 222 aaKnown RBP10.74□□□□□ -0.69
LIG3-201ENST00000262327 PIK3CDO00329 1044 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 GRIN3BO60391 1043 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 UBOX5O94941 541 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 KCNJ2P63252 427 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 IRX1P78414 480 aaPredicted RBP10.74□□□□□ -0.69
LIG3-201ENST00000262327 SP4Q02446 784 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 ADCY2Q08462 1091 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 PLCB4Q15147 1175 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 ZC3H12AQ5D1E8 599 aaKnown RBP10.74□□□□□ -0.69
LIG3-201ENST00000262327 NUGGCQ68CJ6 796 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 C11orf63Q6NUN7 778 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 CAPN12Q6ZSI9 719 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 CCDC63Q8NA47 563 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 TAS1R2Q8TE23 839 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 CPA5Q8WXQ8 436 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 PCYOX1Q9UHG3 505 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 ANAPC7Q9UJX3 599 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 ODF2LQ9ULJ1 636 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 STK24Q9Y6E0 443 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 A8MUI8 341 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 PODXLO00592 558 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 GJB6O95452 261 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 ECEL1O95672 775 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 MPP2Q14168 576 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 BTNL9Q6UXG8 535 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 TRPM8Q7Z2W7 1104 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 CYP4X1Q8N118 509 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 PRCCQ92733 491 aaPredicted RBP10.74□□□□□ -0.69
LIG3-201ENST00000262327 PAIP2Q9BPZ3 127 aaKnown RBP10.74□□□□□ -0.69
LIG3-201ENST00000262327 KLHL11Q9NVR0 708 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 MCM8Q9UJA3 840 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 PNMA3Q9UL41 463 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 MTUS1Q9ULD2 1270 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 R3HDM2Q9Y2K5 976 aaKnown RBP10.74□□□□□ -0.69
LIG3-201ENST00000262327 PASKQ96RG2 1323 aa10.74□□□□□ -0.69
LIG3-201ENST00000262327 AGTP01019 485 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 MYCLP12524 364 aaPredicted RBP10.73□□□□□ -0.69
LIG3-201ENST00000262327 CYP11B1P15538 503 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 CAP2P40123 477 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 RARRES1P49788 294 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 LACTB2Q53H82 288 aaPredicted RBP10.73□□□□□ -0.69
LIG3-201ENST00000262327 PIGWQ7Z7B1 504 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 PASD1Q8IV76 773 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 CCDC50Q8IVM0 306 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 CD101Q93033 1021 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 ART4Q93070 314 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 C9orf72Q96LT7 481 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 ACCSQ96QU6 501 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 TACO1Q9BSH4 297 aaKnown RBP10.73□□□□□ -0.69
LIG3-201ENST00000262327 DEFB129Q9H1M3 183 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 KDM4CQ9H3R0 1056 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 STK38LQ9Y2H1 464 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 TP73O15350 636 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 CETPP11597 493 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 RARGP13631 454 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 EIF2AK2P19525 551 aaKnown RBP10.73□□□□□ -0.69
LIG3-201ENST00000262327 ADSSP30520 456 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 RWDD2BP57060 319 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 XRCC4Q13426 336 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 PPP2R5EQ16537 467 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 NFIL3Q16649 462 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 FAM71AQ8IYT1 594 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 C3orf20Q8ND61 904 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 MXRA8Q9BRK3 442 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 STRA6Q9BX79 667 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 WNT8AQ9H1J5 351 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 NOD2Q9HC29 1040 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 ARHGEF10LQ9HCE6 1279 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 ADARB2Q9NS39 739 aaKnown RBP10.73□□□□□ -0.69
LIG3-201ENST00000262327 USTQ9Y2C2 406 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 ATP6V1G2O95670 118 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 CDC25CP30307 473 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 ITGA8P53708 1063 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 DRG2P55039 364 aaKnown RBP10.73□□□□□ -0.69
LIG3-201ENST00000262327 SNRNP35Q16560 246 aaKnown RBP10.73□□□□□ -0.69
LIG3-201ENST00000262327 PREPLQ4J6C6 727 aaPredicted RBP10.73□□□□□ -0.69
LIG3-201ENST00000262327 DCAF15Q66K64 600 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 DPY19L2Q6NUT2 758 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 FAM47EQ6ZV65 393 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 ARMC9Q7Z3E5 817 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 FMNL3Q8IVF7 1028 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 TRPM4Q8TD43 1214 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 CENPTQ96BT3 561 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 STAMBPL1Q96FJ0 436 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 A1CFQ9NQ94 594 aaKnown RBP10.73□□□□□ -0.69
LIG3-201ENST00000262327 CCPG1Q9ULG6 757 aa10.73□□□□□ -0.69
LIG3-201ENST00000262327 ANKRD33BA6NCL7 494 aa10.72□□□□□ -0.69
LIG3-201ENST00000262327 DDNO94850 711 aaPredicted RBP10.72□□□□□ -0.69
LIG3-201ENST00000262327 CFHP08603 1231 aa10.72□□□□□ -0.69
LIG3-201ENST00000262327 ALAS1P13196 640 aa10.72□□□□□ -0.69
LIG3-201ENST00000262327 MAPK4P31152 587 aa10.72□□□□□ -0.69
LIG3-201ENST00000262327 NF2P35240 595 aa10.72□□□□□ -0.69
LIG3-201ENST00000262327 ADCY8P40145 1251 aa10.72□□□□□ -0.69
LIG3-201ENST00000262327 CCNHP51946 323 aaPredicted RBP10.72□□□□□ -0.69
LIG3-201ENST00000262327 GPR162Q16538 588 aa10.72□□□□□ -0.69
LIG3-201ENST00000262327 XKR9Q5GH70 373 aa10.72□□□□□ -0.69
LIG3-201ENST00000262327 FAM182AQ5T1J6 154 aa10.72□□□□□ -0.69
LIG3-201ENST00000262327 ANGEL2Q5VTE6 544 aaKnown RBP10.72□□□□□ -0.69
LIG3-201ENST00000262327 CYP4F22Q6NT55 531 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms