RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 NCAPHQ15003 741 aa15.3■□□□□ 0.04
VPS25-201ENST00000253794 CHD9Q3L8U1 2897 aa15.3■□□□□ 0.04
VPS25-201ENST00000253794 CEP135Q66GS9 1140 aa15.3■□□□□ 0.04
VPS25-201ENST00000253794 FAM117BQ6P1L5 589 aa15.3■□□□□ 0.04
VPS25-201ENST00000253794 USP37Q86T82 979 aa15.3■□□□□ 0.04
VPS25-201ENST00000253794 WDR49Q8IV35 697 aa15.3■□□□□ 0.04
VPS25-201ENST00000253794 EFCAB13Q8IY85 973 aa15.3■□□□□ 0.04
VPS25-201ENST00000253794 CGRRF1Q99675 332 aa15.3■□□□□ 0.04
VPS25-201ENST00000253794 TMEM175Q9BSA9 504 aa15.3■□□□□ 0.04
VPS25-201ENST00000253794 SRRTQ9BXP5 876 aaKnown RBP15.3■□□□□ 0.04
VPS25-201ENST00000253794 PDE11AQ9HCR9 933 aa15.3■□□□□ 0.04
VPS25-201ENST00000253794 UBQLN1Q9UMX0 589 aaKnown RBP15.3■□□□□ 0.04
VPS25-201ENST00000253794 GRXCR1A8MXD5 290 aa15.29■□□□□ 0.04
VPS25-201ENST00000253794 XPOTO43592 962 aaKnown RBP15.29■□□□□ 0.04
VPS25-201ENST00000253794 B4GALT3O60512 393 aa15.29■□□□□ 0.04
VPS25-201ENST00000253794 IBSPP21815 317 aaPredicted RBP15.29■□□□□ 0.04
VPS25-201ENST00000253794 LRPAP1P30533 357 aa15.29■□□□□ 0.04
VPS25-201ENST00000253794 AP3M2P53677 418 aa15.29■□□□□ 0.04
VPS25-201ENST00000253794 TUSC3Q13454 348 aa15.29■□□□□ 0.04
VPS25-201ENST00000253794 BTG3Q14201 252 aaPredicted RBP15.29■□□□□ 0.04
VPS25-201ENST00000253794 TMEM132DQ14C87 1099 aa15.29■□□□□ 0.04
VPS25-201ENST00000253794 IQCB1Q15051 598 aa15.29■□□□□ 0.04
VPS25-201ENST00000253794 C1orf220Q5T0J3 134 aa15.29■□□□□ 0.04
VPS25-201ENST00000253794 CDKAL1Q5VV42 579 aa15.29■□□□□ 0.04
VPS25-201ENST00000253794 JADE1Q6IE81 842 aa15.29■□□□□ 0.04
VPS25-201ENST00000253794 COLGALT2Q8IYK4 626 aa15.29■□□□□ 0.04
VPS25-201ENST00000253794 RDH13Q8NBN7 331 aa15.29■□□□□ 0.04
VPS25-201ENST00000253794 EEF2KMTQ96G04 330 aa15.29■□□□□ 0.04
VPS25-201ENST00000253794 UROC1Q96N76 676 aa15.29■□□□□ 0.04
VPS25-201ENST00000253794 PBX4Q9BYU1 374 aa15.29■□□□□ 0.04
VPS25-201ENST00000253794 INTS13Q9NVM9 706 aa15.29■□□□□ 0.04
VPS25-201ENST00000253794 ARMCX3Q9UH62 379 aaPredicted RBP15.29■□□□□ 0.04
VPS25-201ENST00000253794 INPP5FQ9Y2H2 1132 aa15.29■□□□□ 0.04
VPS25-201ENST00000253794 NFE2L3Q9Y4A8 694 aa15.29■□□□□ 0.04
VPS25-201ENST00000253794 MRPL42Q9Y6G3 142 aaKnown RBP15.29■□□□□ 0.04
VPS25-201ENST00000253794 PTPRJQ12913 1337 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 LCHNA4D1U4 455 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 LINC01553A4QN01 128 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 LRRIQ3A6PVS8 624 aaPredicted RBP15.28■□□□□ 0.04
VPS25-201ENST00000253794 DDHD2O94830 711 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 POMCP01189 267 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 NFICP08651 508 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 ZNF18P17022 549 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 GTF2H1P32780 548 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 VAMP7P51809 220 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 RABGGTBP53611 331 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 GLRA4Q5JXX5 417 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 ZNF280BQ86YH2 543 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 FAM114A1Q8IWE2 563 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 TRIM59Q8IWR1 403 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 DHX40Q8IX18 779 aaKnown RBP15.28■□□□□ 0.04
VPS25-201ENST00000253794 FIBCD1Q8N539 461 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 CXorf38Q8TB03 319 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 FAM200AQ8TCP9 573 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 KIF12Q96FN5 646 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 FNBP1Q96RU3 617 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 ANP32EQ9BTT0 268 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 HSD3B7Q9H2F3 369 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 NRDE2Q9H7Z3 1164 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 YBX2Q9Y2T7 364 aaKnown RBP15.28■□□□□ 0.04
VPS25-201ENST00000253794 RWDD3Q9Y3V2 267 aa15.28■□□□□ 0.04
VPS25-201ENST00000253794 SMTNL1A8MU46 457 aa15.27■□□□□ 0.04
VPS25-201ENST00000253794 TMEM189-UBE2V1I3L0A0 370 aa15.27■□□□□ 0.04
VPS25-201ENST00000253794 PMM2O15305 246 aa15.27■□□□□ 0.04
VPS25-201ENST00000253794 KRT13P13646 458 aa15.27■□□□□ 0.04
VPS25-201ENST00000253794 PRKCSHP14314 528 aaPredicted RBP15.27■□□□□ 0.04
VPS25-201ENST00000253794 LAG3P18627 525 aa15.27■□□□□ 0.04
VPS25-201ENST00000253794 EEF1GP26641 437 aaKnown RBP15.27■□□□□ 0.04
VPS25-201ENST00000253794 RPL9P32969 192 aaKnown RBP15.27■□□□□ 0.04
VPS25-201ENST00000253794 SOX4Q06945 474 aaPredicted RBP15.27■□□□□ 0.04
VPS25-201ENST00000253794 TPD52L1Q16890 204 aaPredicted RBP15.27■□□□□ 0.04
VPS25-201ENST00000253794 DUOXA2Q1HG44 320 aa15.27■□□□□ 0.04
VPS25-201ENST00000253794 PAN2Q504Q3 1202 aaKnown RBP15.27■□□□□ 0.04
VPS25-201ENST00000253794 C15orf39Q6ZRI6 1047 aa15.27■□□□□ 0.04
VPS25-201ENST00000253794 BEST2Q8NFU1 509 aa15.27■□□□□ 0.04
VPS25-201ENST00000253794 CACTINQ8WUQ7 758 aaKnown RBP15.27■□□□□ 0.04
VPS25-201ENST00000253794 SLC35C1Q96A29 364 aa15.27■□□□□ 0.04
VPS25-201ENST00000253794 DDX27Q96GQ7 796 aaKnown RBP15.27■□□□□ 0.04
VPS25-201ENST00000253794 CNOT6LQ96LI5 555 aaKnown RBP15.27■□□□□ 0.04
VPS25-201ENST00000253794 SAMD11Q96NU1 681 aa15.27■□□□□ 0.04
VPS25-201ENST00000253794 TSPY26PQ9H489 355 aa15.27■□□□□ 0.04
VPS25-201ENST00000253794 MSRAQ9UJ68 235 aa15.27■□□□□ 0.04
VPS25-201ENST00000253794 TRIOBPQ9H2D6 2365 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 TDRD15B5MCY1 1934 aaKnown RBP15.26■□□□□ 0.03
VPS25-201ENST00000253794 ANO9A1A5B4 782 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 C5orf67F2Z3F1 127 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 STX10O60499 249 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 CA3P07451 260 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 GALTP07902 379 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 DLATP10515 647 aaKnown RBP15.26■□□□□ 0.03
VPS25-201ENST00000253794 PAX3P23760 479 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 PBX2P40425 430 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 DLG4P78352 724 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 RNASELQ05823 741 aaKnown RBP15.26■□□□□ 0.03
VPS25-201ENST00000253794 UPP1Q16831 310 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 CCDC40Q4G0X9 1142 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 AOPEPQ8N6M6 819 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 C1orf127Q8N9H9 656 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 OR5B17Q8NGF7 314 aa15.26■□□□□ 0.03
VPS25-201ENST00000253794 ZNF516Q92618 1163 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms