RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 OR1D2P34982 312 aa23.09■■□□□ 1.29
NEDD8-201ENST00000250495 SMTNP53814 917 aa23.09■■□□□ 1.29
NEDD8-201ENST00000250495 CWF19L1Q69YN2 538 aaKnown RBP23.09■■□□□ 1.29
NEDD8-201ENST00000250495 ALKAL1Q6UXT8 129 aa23.09■■□□□ 1.29
NEDD8-201ENST00000250495 RTL10Q7L3V2 364 aa23.09■■□□□ 1.29
NEDD8-201ENST00000250495 GRASPQ7Z6J2 395 aaPredicted RBP23.09■■□□□ 1.29
NEDD8-201ENST00000250495 CEP120Q8N960 986 aa23.09■■□□□ 1.29
NEDD8-201ENST00000250495 ACAP3Q96P50 834 aa23.09■■□□□ 1.29
NEDD8-201ENST00000250495 MTRRQ9UBK8 725 aa23.09■■□□□ 1.29
NEDD8-201ENST00000250495 VWA8A3KMH1 1905 aa23.08■■□□□ 1.29
NEDD8-201ENST00000250495 SFI1A8K8P3 1242 aa23.08■■□□□ 1.29
NEDD8-201ENST00000250495 ADAM12O43184 909 aa23.08■■□□□ 1.29
NEDD8-201ENST00000250495 CFHP08603 1231 aa23.08■■□□□ 1.29
NEDD8-201ENST00000250495 SRFP11831 508 aa23.08■■□□□ 1.29
NEDD8-201ENST00000250495 OSTNP61366 133 aa23.08■■□□□ 1.29
NEDD8-201ENST00000250495 MAPK7Q13164 816 aa23.08■■□□□ 1.29
NEDD8-201ENST00000250495 HYIQ5T013 277 aa23.08■■□□□ 1.29
NEDD8-201ENST00000250495 ANKS3Q6ZW76 656 aa23.08■■□□□ 1.29
NEDD8-201ENST00000250495 TAS1R3Q7RTX0 852 aa23.08■■□□□ 1.29
NEDD8-201ENST00000250495 KCNK18Q7Z418 384 aa23.08■■□□□ 1.29
NEDD8-201ENST00000250495 SPIRE2Q8WWL2 714 aa23.08■■□□□ 1.29
NEDD8-201ENST00000250495 TMX3Q96JJ7 454 aa23.08■■□□□ 1.29
NEDD8-201ENST00000250495 BACE2Q9Y5Z0 518 aa23.08■■□□□ 1.29
NEDD8-201ENST00000250495 ANHXE9PGG2 379 aa23.07■■□□□ 1.28
NEDD8-201ENST00000250495 STK25O00506 426 aa23.07■■□□□ 1.28
NEDD8-201ENST00000250495 SLC16A4O15374 487 aa23.07■■□□□ 1.28
NEDD8-201ENST00000250495 PROZP22891 400 aa23.07■■□□□ 1.28
NEDD8-201ENST00000250495 GJB2P29033 226 aa23.07■■□□□ 1.28
NEDD8-201ENST00000250495 STRN3Q13033 797 aa23.07■■□□□ 1.28
NEDD8-201ENST00000250495 AXDND1Q5T1B0 1012 aaPredicted RBP23.07■■□□□ 1.28
NEDD8-201ENST00000250495 ARL6IP4Q66PJ3 421 aaKnown RBP23.07■■□□□ 1.28
NEDD8-201ENST00000250495 MPZL3Q6UWV2 235 aa23.07■■□□□ 1.28
NEDD8-201ENST00000250495 CD300LGQ6UXG3 332 aa23.07■■□□□ 1.28
NEDD8-201ENST00000250495 SYT2Q8N9I0 419 aaPredicted RBP23.07■■□□□ 1.28
NEDD8-201ENST00000250495 CDK5RAP3Q96JB5 506 aa23.07■■□□□ 1.28
NEDD8-201ENST00000250495 UPF2Q9HAU5 1272 aaKnown RBP23.07■■□□□ 1.28
NEDD8-201ENST00000250495 GOLGA2P5Q9HBQ8 144 aa23.07■■□□□ 1.28
NEDD8-201ENST00000250495 KCND2Q9NZV8 630 aa23.07■■□□□ 1.28
NEDD8-201ENST00000250495 POLIQ9UNA4 740 aa23.07■■□□□ 1.28
NEDD8-201ENST00000250495 CDY1Q9Y6F8 540 aa23.07■■□□□ 1.28
NEDD8-201ENST00000250495 DOCK6Q96HP0 2047 aa23.07■■□□□ 1.28
NEDD8-201ENST00000250495 PI15O43692 258 aa23.06■■□□□ 1.28
NEDD8-201ENST00000250495 GFRA3O60609 400 aa23.06■■□□□ 1.28
NEDD8-201ENST00000250495 POU2F2P09086 479 aa23.06■■□□□ 1.28
NEDD8-201ENST00000250495 PLS3P13797 630 aa23.06■■□□□ 1.28
NEDD8-201ENST00000250495 KCNE1P15382 129 aa23.06■■□□□ 1.28
NEDD8-201ENST00000250495 IGFBP6P24592 240 aaPredicted RBP23.06■■□□□ 1.28
NEDD8-201ENST00000250495 MCM2P49736 904 aa23.06■■□□□ 1.28
NEDD8-201ENST00000250495 SLC7A14Q8TBB6 771 aa23.06■■□□□ 1.28
NEDD8-201ENST00000250495 PNMA5Q96PV4 448 aa23.06■■□□□ 1.28
NEDD8-201ENST00000250495 CDH7Q9ULB5 785 aa23.06■■□□□ 1.28
NEDD8-201ENST00000250495 VWA3AA6NCI4 1184 aa23.05■■□□□ 1.28
NEDD8-201ENST00000250495 PROB1E7EW31 1015 aa23.05■■□□□ 1.28
NEDD8-201ENST00000250495 CCL16O15467 120 aa23.05■■□□□ 1.28
NEDD8-201ENST00000250495 RFX1P22670 979 aa23.05■■□□□ 1.28
NEDD8-201ENST00000250495 TKTP29401 623 aaKnown RBP23.05■■□□□ 1.28
NEDD8-201ENST00000250495 RPL9P32969 192 aaKnown RBP23.05■■□□□ 1.28
NEDD8-201ENST00000250495 BRCC3P46736 316 aa23.05■■□□□ 1.28
NEDD8-201ENST00000250495 SOX4Q06945 474 aaPredicted RBP23.05■■□□□ 1.28
NEDD8-201ENST00000250495 RAD51AP2Q09MP3 1159 aa23.05■■□□□ 1.28
NEDD8-201ENST00000250495 HTR4Q13639 388 aa23.05■■□□□ 1.28
NEDD8-201ENST00000250495 SNX27Q96L92 541 aa23.05■■□□□ 1.28
NEDD8-201ENST00000250495 MYH11P35749 1972 aa23.04■■□□□ 1.28
NEDD8-201ENST00000250495 PODXLO00592 558 aa23.04■■□□□ 1.28
NEDD8-201ENST00000250495 ABLIM1O14639 778 aa23.04■■□□□ 1.28
NEDD8-201ENST00000250495 TOM1L1O75674 476 aa23.04■■□□□ 1.28
NEDD8-201ENST00000250495 PLA2G4BP0C869 781 aa23.04■■□□□ 1.28
NEDD8-201ENST00000250495 NTHL1P78549 312 aa23.04■■□□□ 1.28
NEDD8-201ENST00000250495 RSPO2Q6UXX9 243 aaPredicted RBP23.04■■□□□ 1.28
NEDD8-201ENST00000250495 CCDC105Q8IYK2 499 aa23.04■■□□□ 1.28
NEDD8-201ENST00000250495 C3orf58Q8NDZ4 430 aa23.04■■□□□ 1.28
NEDD8-201ENST00000250495 ZBTB45Q96K62 511 aaPredicted RBP23.04■■□□□ 1.28
NEDD8-201ENST00000250495 ZMAT2Q96NC0 199 aaKnown RBP23.04■■□□□ 1.28
NEDD8-201ENST00000250495 PLIN2Q99541 437 aa23.04■■□□□ 1.28
NEDD8-201ENST00000250495 CNTN3Q9P232 1028 aa23.04■■□□□ 1.28
NEDD8-201ENST00000250495 CA14Q9ULX7 337 aa23.04■■□□□ 1.28
NEDD8-201ENST00000250495 SMC3Q9UQE7 1217 aa23.04■■□□□ 1.28
NEDD8-201ENST00000250495 NUMBLQ9Y6R0 609 aa23.04■■□□□ 1.28
NEDD8-201ENST00000250495 CITO14578 2027 aa23.04■■□□□ 1.28
NEDD8-201ENST00000250495 KRBA1A5PL33 1030 aa23.03■■□□□ 1.28
NEDD8-201ENST00000250495 H0YCG3 227 aa23.03■■□□□ 1.28
NEDD8-201ENST00000250495 I3L4J1 428 aa23.03■■□□□ 1.28
NEDD8-201ENST00000250495 SLC26A4O43511 780 aa23.03■■□□□ 1.28
NEDD8-201ENST00000250495 HARSP12081 509 aaKnown RBP23.03■■□□□ 1.28
NEDD8-201ENST00000250495 NBL1P41271 181 aa23.03■■□□□ 1.28
NEDD8-201ENST00000250495 SLC12A3P55017 1021 aa23.03■■□□□ 1.28
NEDD8-201ENST00000250495 ZPBP2Q6X784 338 aa23.03■■□□□ 1.28
NEDD8-201ENST00000250495 MTSS1LQ765P7 747 aa23.03■■□□□ 1.28
NEDD8-201ENST00000250495 TMEM161BQ8NDZ6 487 aa23.03■■□□□ 1.28
NEDD8-201ENST00000250495 ZNF461Q8TAF7 563 aa23.03■■□□□ 1.28
NEDD8-201ENST00000250495 GPR152Q8TDT2 470 aa23.03■■□□□ 1.28
NEDD8-201ENST00000250495 AK8Q96MA6 479 aa23.03■■□□□ 1.28
NEDD8-201ENST00000250495 SLC2A4RGQ9NR83 387 aa23.03■■□□□ 1.28
NEDD8-201ENST00000250495 LARSQ9P2J5 1176 aaKnown RBP23.03■■□□□ 1.28
NEDD8-201ENST00000250495 NUB1Q9Y5A7 615 aa23.03■■□□□ 1.28
NEDD8-201ENST00000250495 H7C4K7 107 aa23.02■■□□□ 1.28
NEDD8-201ENST00000250495 SYN3O14994 580 aa23.02■■□□□ 1.28
NEDD8-201ENST00000250495 CLDN3O15551 220 aa23.02■■□□□ 1.28
NEDD8-201ENST00000250495 MAPTP10636 758 aaKnown RBP23.02■■□□□ 1.28
NEDD8-201ENST00000250495 ELF1P32519 619 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms