RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 CHMP6Q96FZ7 201 aa16.01■□□□□ 0.15
PMPCB-201ENST00000249269 RUNDC3BQ96NL0 473 aa16.01■□□□□ 0.15
PMPCB-201ENST00000249269 STARD7Q9NQZ5 370 aa16.01■□□□□ 0.15
PMPCB-201ENST00000249269 TRAF3IP3Q9Y228 551 aa16.01■□□□□ 0.15
PMPCB-201ENST00000249269 DOT1LQ8TEK3 1739 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 SLC16A3O15427 465 aaKnown RBP16■□□□□ 0.15
PMPCB-201ENST00000249269 NOS2P35228 1153 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 ADCY7P51828 1080 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 SLC8A3P57103 927 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 ROR2Q01974 943 aaKnown RBP16■□□□□ 0.15
PMPCB-201ENST00000249269 DHX34Q14147 1143 aaKnown RBP16■□□□□ 0.15
PMPCB-201ENST00000249269 ERMARDQ5T6L9 678 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 LVRNQ6Q4G3 990 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 CCDC110Q8TBZ0 833 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 CCT6BQ92526 530 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 SPDL1Q96EA4 605 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 TXLNGYQ9BZA5 131 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 BATF3Q9NR55 127 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 SMARCAL1Q9NZC9 954 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 PARP2Q9UGN5 583 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 CCDC169A6NNP5 214 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 B4GALT4O60513 344 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 CYP2D6P10635 497 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 HOXD12P35452 270 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 SEC24CP53992 1094 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 NEK5Q6P3R8 708 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 C16orf86Q6ZW13 317 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 IRF2BP2Q7Z5L9 587 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 TPCN2Q8NHX9 752 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 SPATA18Q8TC71 538 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 FRMD6Q96NE9 622 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 NAGPAQ9UK23 515 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 GTF2A1LQ9UNN4 478 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 PCDHA2Q9Y5H9 948 aa16■□□□□ 0.15
PMPCB-201ENST00000249269 GNPATO15228 680 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 ODF2Q5BJF6 829 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 PHLDB3Q6NSJ2 640 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 C15orf52Q6ZUT6 534 aaKnown RBP15.99■□□□□ 0.15
PMPCB-201ENST00000249269 LRRTM3Q86VH5 581 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 ZBTB8BQ8NAP8 495 aaPredicted RBP15.99■□□□□ 0.15
PMPCB-201ENST00000249269 HES6Q96HZ4 224 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 GORASP1Q9BQQ3 440 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 NLRC4Q9NPP4 1024 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 SMYD2Q9NRG4 433 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 ABCF3Q9NUQ8 709 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 ADAMTS1Q9UHI8 967 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 LEMD3Q9Y2U8 911 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 ZNF711Q9Y462 761 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 ESYT3A0FGR9 886 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 KRIT1O00522 736 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 H2AFZP0C0S5 128 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 FDX1P10109 184 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 SCTRP47872 440 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 PMS2P54278 862 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 CORO6Q6QEF8 472 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 MOXD1Q6UVY6 613 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 H2AFVQ71UI9 128 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 CCDC116Q8IYX3 515 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 SPICE1Q8N0Z3 855 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 CCDC197Q8NCU1 140 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 RAPGEF5Q92565 580 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 HOOK2Q96ED9 719 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 COG8Q96MW5 612 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 EIF2AK1Q9BQI3 630 aaKnown RBP15.99■□□□□ 0.15
PMPCB-201ENST00000249269 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.99■□□□□ 0.15
PMPCB-201ENST00000249269 OSBPL7Q9BZF2 842 aa15.99■□□□□ 0.15
PMPCB-201ENST00000249269 PPANQ9NQ55 473 aaKnown RBP15.99■□□□□ 0.15
PMPCB-201ENST00000249269 NOC2LQ9Y3T9 749 aaKnown RBP15.99■□□□□ 0.15
PMPCB-201ENST00000249269 NCANO14594 1321 aa15.98■□□□□ 0.15
PMPCB-201ENST00000249269 DDX60LQ5H9U9 1706 aaKnown RBP15.98■□□□□ 0.15
PMPCB-201ENST00000249269 USP17L8P0C7I0 530 aa15.98■□□□□ 0.15
PMPCB-201ENST00000249269 UBL4AP11441 157 aa15.98■□□□□ 0.15
PMPCB-201ENST00000249269 DRD4P21917 467 aa15.98■□□□□ 0.15
PMPCB-201ENST00000249269 CES1P23141 567 aa15.98■□□□□ 0.15
PMPCB-201ENST00000249269 ETV3P41162 512 aa15.98■□□□□ 0.15
PMPCB-201ENST00000249269 RPS8P62241 208 aaKnown RBP15.98■□□□□ 0.15
PMPCB-201ENST00000249269 FAPQ12884 760 aa15.98■□□□□ 0.15
PMPCB-201ENST00000249269 MAP7Q14244 749 aa15.98■□□□□ 0.15
PMPCB-201ENST00000249269 NFE2Q16621 373 aaPredicted RBP15.98■□□□□ 0.15
PMPCB-201ENST00000249269 NFIL3Q16649 462 aa15.98■□□□□ 0.15
PMPCB-201ENST00000249269 PEX26Q7Z412 305 aa15.98■□□□□ 0.15
PMPCB-201ENST00000249269 CPLX4Q7Z7G2 160 aa15.98■□□□□ 0.15
PMPCB-201ENST00000249269 KLHL7Q8IXQ5 586 aa15.98■□□□□ 0.15
PMPCB-201ENST00000249269 GOT1L1Q8NHS2 421 aaPredicted RBP15.98■□□□□ 0.15
PMPCB-201ENST00000249269 ANKRD27Q96NW4 1050 aa15.98■□□□□ 0.15
PMPCB-201ENST00000249269 ZSCAN5CA6NGD5 496 aaPredicted RBP15.97■□□□□ 0.15
PMPCB-201ENST00000249269 PPIP5K2O43314 1243 aa15.97■□□□□ 0.15
PMPCB-201ENST00000249269 AFPP02771 609 aaKnown RBP15.97■□□□□ 0.15
PMPCB-201ENST00000249269 CYP17A1P05093 508 aa15.97■□□□□ 0.15
PMPCB-201ENST00000249269 HAAOP46952 286 aa15.97■□□□□ 0.15
PMPCB-201ENST00000249269 GJA9P57773 515 aa15.97■□□□□ 0.15
PMPCB-201ENST00000249269 TUBA3CQ13748 450 aa15.97■□□□□ 0.15
PMPCB-201ENST00000249269 SEMA3AQ14563 771 aa15.97■□□□□ 0.15
PMPCB-201ENST00000249269 ALKBH5Q6P6C2 394 aaKnown RBP15.97■□□□□ 0.15
PMPCB-201ENST00000249269 XPO6Q96QU8 1125 aaKnown RBP15.97■□□□□ 0.15
PMPCB-201ENST00000249269 CARD9Q9H257 536 aa15.97■□□□□ 0.15
PMPCB-201ENST00000249269 IL20Q9NYY1 176 aa15.97■□□□□ 0.15
PMPCB-201ENST00000249269 IL1RAPL1Q9NZN1 696 aa15.97■□□□□ 0.15
PMPCB-201ENST00000249269 RASAL2Q9UJF2 1139 aa15.97■□□□□ 0.15
PMPCB-201ENST00000249269 NHSQ6T4R5 1651 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms