RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 HSPA1AP0DMV8 641 aaKnown RBP13.96□□□□□ -0.18
HIF3A-201ENST00000244302 HSPA1BP0DMV9 641 aaKnown RBP13.96□□□□□ -0.18
HIF3A-201ENST00000244302 CD52P31358 61 aa13.96□□□□□ -0.18
HIF3A-201ENST00000244302 BIRC3Q13489 604 aa13.96□□□□□ -0.18
HIF3A-201ENST00000244302 MBTPS1Q14703 1052 aa13.96□□□□□ -0.18
HIF3A-201ENST00000244302 ZACNQ401N2 412 aa13.96□□□□□ -0.18
HIF3A-201ENST00000244302 GLRA4Q5JXX5 417 aa13.96□□□□□ -0.18
HIF3A-201ENST00000244302 HGSNATQ68CP4 663 aa13.96□□□□□ -0.18
HIF3A-201ENST00000244302 NME8Q8N427 588 aa13.96□□□□□ -0.18
HIF3A-201ENST00000244302 KREMEN1Q96MU8 473 aa13.96□□□□□ -0.18
HIF3A-201ENST00000244302 ZMAT2Q96NC0 199 aaKnown RBP13.96□□□□□ -0.18
HIF3A-201ENST00000244302 APOBEC3GQ9HC16 384 aaKnown RBP13.96□□□□□ -0.18
HIF3A-201ENST00000244302 KIAA1586Q9HCI6 787 aa13.96□□□□□ -0.18
HIF3A-201ENST00000244302 PLCB1Q9NQ66 1216 aa13.96□□□□□ -0.18
HIF3A-201ENST00000244302 RAB20Q9NX57 234 aa13.96□□□□□ -0.18
HIF3A-201ENST00000244302 CEP72Q9P209 647 aa13.96□□□□□ -0.18
HIF3A-201ENST00000244302 A0A1W2PQJ5 194 aa13.95□□□□□ -0.18
HIF3A-201ENST00000244302 GTPBP10A4D1E9 387 aaKnown RBP13.95□□□□□ -0.18
HIF3A-201ENST00000244302 SPDYE4A6NLX3 237 aa13.95□□□□□ -0.18
HIF3A-201ENST00000244302 FOXN3O00409 490 aaPredicted RBP13.95□□□□□ -0.18
HIF3A-201ENST00000244302 MGEA5O60502 916 aa13.95□□□□□ -0.18
HIF3A-201ENST00000244302 HLA-DRAP01903 254 aa13.95□□□□□ -0.18
HIF3A-201ENST00000244302 SCP2P22307 547 aa13.95□□□□□ -0.18
HIF3A-201ENST00000244302 TRIM14Q14142 442 aa13.95□□□□□ -0.18
HIF3A-201ENST00000244302 JADE1Q6IE81 842 aa13.95□□□□□ -0.18
HIF3A-201ENST00000244302 RPF1Q9H9Y2 349 aaKnown RBP13.95□□□□□ -0.18
HIF3A-201ENST00000244302 PLAGL2Q9UPG8 496 aa13.95□□□□□ -0.18
HIF3A-201ENST00000244302 PHF24Q9UPV7 400 aa13.95□□□□□ -0.18
HIF3A-201ENST00000244302 TRPV2Q9Y5S1 764 aa13.95□□□□□ -0.18
HIF3A-201ENST00000244302 KBTBD13C9JR72 458 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 ARVCFO00192 962 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 ZNF263O14978 683 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 STX10O60499 249 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 RPS6KA5O75582 802 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 MCF2P10911 925 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 IGFBP6P24592 240 aaPredicted RBP13.94□□□□□ -0.18
HIF3A-201ENST00000244302 CYP27A1Q02318 531 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 DRAP1Q14919 205 aaPredicted RBP13.94□□□□□ -0.18
HIF3A-201ENST00000244302 TRAF7Q6Q0C0 670 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 SLC43A3Q8NBI5 491 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 FBXL13Q8NEE6 735 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 HELQQ8TDG4 1101 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 CGRRF1Q99675 332 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 TSEN34Q9BSV6 310 aaKnown RBP13.94□□□□□ -0.18
HIF3A-201ENST00000244302 APEX2Q9UBZ4 518 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 OGDHLQ9ULD0 1010 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 REXO2Q9Y3B8 237 aaKnown RBP13.94□□□□□ -0.18
HIF3A-201ENST00000244302 TRIP11Q15643 1979 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 CABYRO75952 493 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 GFPT2O94808 682 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 CKBP12277 381 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 FECHP22830 423 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 JAM2P57087 298 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 LPIN1Q14693 890 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 MEA1Q16626 185 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 SLC27A1Q6PCB7 646 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 TRAPPC11Q7Z392 1133 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 IRF2BP2Q7Z5L9 587 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 CTU1Q7Z7A3 348 aaKnown RBP13.94□□□□□ -0.18
HIF3A-201ENST00000244302 PPM1KQ8N3J5 372 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 SMG8Q8ND04 991 aaKnown RBP13.94□□□□□ -0.18
HIF3A-201ENST00000244302 LPPQ93052 612 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 ZNF333Q96JL9 665 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 NHEJ1Q9H9Q4 299 aaPredicted RBP13.94□□□□□ -0.18
HIF3A-201ENST00000244302 CACNG4Q9UBN1 327 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 PADI3Q9ULW8 664 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 COQ4Q9Y3A0 265 aa13.94□□□□□ -0.18
HIF3A-201ENST00000244302 PQBP1O60828 265 aaKnown RBP13.93□□□□□ -0.18
HIF3A-201ENST00000244302 TFRCP02786 760 aaKnown RBP13.93□□□□□ -0.18
HIF3A-201ENST00000244302 CLTAP09496 248 aa13.93□□□□□ -0.18
HIF3A-201ENST00000244302 EIF4A3P38919 411 aaKnown RBP13.93□□□□□ -0.18
HIF3A-201ENST00000244302 CDK7P50613 346 aa13.93□□□□□ -0.18
HIF3A-201ENST00000244302 MYL6P60660 151 aa13.93□□□□□ -0.18
HIF3A-201ENST00000244302 FAM193AP78312 1265 aa13.93□□□□□ -0.18
HIF3A-201ENST00000244302 FBXO47Q5MNV8 452 aa13.93□□□□□ -0.18
HIF3A-201ENST00000244302 NOTUMQ6P988 496 aa13.93□□□□□ -0.18
HIF3A-201ENST00000244302 U2AF1L4Q8WU68 220 aaKnown RBP13.93□□□□□ -0.18
HIF3A-201ENST00000244302 C18orf25Q96B23 403 aaPredicted RBP13.93□□□□□ -0.18
HIF3A-201ENST00000244302 SPAG5Q96R06 1193 aa13.93□□□□□ -0.18
HIF3A-201ENST00000244302 SIX4Q9UIU6 781 aa13.93□□□□□ -0.18
HIF3A-201ENST00000244302 NUB1Q9Y5A7 615 aa13.93□□□□□ -0.18
HIF3A-201ENST00000244302 FRMPD3Q5JV73 1810 aa13.93□□□□□ -0.18
HIF3A-201ENST00000244302 LAMA3Q16787 3333 aa13.93□□□□□ -0.18
HIF3A-201ENST00000244302 DNM1LO00429 736 aa13.93□□□□□ -0.18
HIF3A-201ENST00000244302 PPEF2O14830 753 aa13.93□□□□□ -0.18
HIF3A-201ENST00000244302 KIAA0391O15091 583 aaKnown RBP13.93□□□□□ -0.18
HIF3A-201ENST00000244302 CDC42EP1Q00587 391 aa13.93□□□□□ -0.18
HIF3A-201ENST00000244302 PTK7Q13308 1070 aa13.93□□□□□ -0.18
HIF3A-201ENST00000244302 GPNMBQ14956 572 aa13.93□□□□□ -0.18
HIF3A-201ENST00000244302 SFMBT2Q5VUG0 894 aa13.93□□□□□ -0.18
HIF3A-201ENST00000244302 TWF2Q6IBS0 349 aaKnown RBP13.93□□□□□ -0.18
HIF3A-201ENST00000244302 KRT222Q8N1A0 295 aa13.93□□□□□ -0.18
HIF3A-201ENST00000244302 C1orf127Q8N9H9 656 aa13.93□□□□□ -0.18
HIF3A-201ENST00000244302 ACAP3Q96P50 834 aa13.93□□□□□ -0.18
HIF3A-201ENST00000244302 IRX2Q9BZI1 471 aaPredicted RBP13.93□□□□□ -0.18
HIF3A-201ENST00000244302 MROH7Q68CQ1 1323 aa13.92□□□□□ -0.18
HIF3A-201ENST00000244302 A0A0U1RQG5 324 aaPredicted RBP13.92□□□□□ -0.18
HIF3A-201ENST00000244302 F8VZ95 297 aa13.92□□□□□ -0.18
HIF3A-201ENST00000244302 M0QZ92 97 aa13.92□□□□□ -0.18
HIF3A-201ENST00000244302 ARHGAP6O43182 974 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms