RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 UAP1L1Q3KQV9 507 aa9.26□□□□□ -0.93
IFT43-201ENST00000238628 LILRA6Q6PI73 481 aa9.26□□□□□ -0.93
IFT43-201ENST00000238628 OTUD6AQ7L8S5 288 aa9.26□□□□□ -0.93
IFT43-201ENST00000238628 FERMT3Q86UX7 667 aa9.26□□□□□ -0.93
IFT43-201ENST00000238628 BLIDQ8IZY5 108 aa9.26□□□□□ -0.93
IFT43-201ENST00000238628 RNF149Q8NC42 400 aa9.26□□□□□ -0.93
IFT43-201ENST00000238628 ITFG1Q8TB96 612 aa9.26□□□□□ -0.93
IFT43-201ENST00000238628 ETNPPLQ8TBG4 499 aa9.26□□□□□ -0.93
IFT43-201ENST00000238628 TCP11Q8WWU5 503 aa9.26□□□□□ -0.93
IFT43-201ENST00000238628 GAB3Q8WWW8 586 aa9.26□□□□□ -0.93
IFT43-201ENST00000238628 DNASE1L2Q92874 299 aa9.26□□□□□ -0.93
IFT43-201ENST00000238628 B3GALT6Q96L58 329 aa9.26□□□□□ -0.93
IFT43-201ENST00000238628 JAKMIP1Q96N16 626 aaKnown RBP9.26□□□□□ -0.93
IFT43-201ENST00000238628 APOL6Q9BWW8 343 aa9.26□□□□□ -0.93
IFT43-201ENST00000238628 EIF2AQ9BY44 585 aaKnown RBP9.26□□□□□ -0.93
IFT43-201ENST00000238628 GPR62Q9BZJ7 368 aa9.26□□□□□ -0.93
IFT43-201ENST00000238628 PLA2G2FQ9BZM2 168 aa9.26□□□□□ -0.93
IFT43-201ENST00000238628 DHX33Q9H6R0 707 aaKnown RBP9.26□□□□□ -0.93
IFT43-201ENST00000238628 BRD9Q9H8M2 597 aa9.26□□□□□ -0.93
IFT43-201ENST00000238628 BMP2KQ9NSY1 1161 aaPredicted RBP9.26□□□□□ -0.93
IFT43-201ENST00000238628 FNIP2Q9P278 1114 aa9.26□□□□□ -0.93
IFT43-201ENST00000238628 DDX25Q9UHL0 483 aaKnown RBP9.26□□□□□ -0.93
IFT43-201ENST00000238628 HES2Q9Y543 173 aa9.26□□□□□ -0.93
IFT43-201ENST00000238628 PPME1Q9Y570 386 aa9.26□□□□□ -0.93
IFT43-201ENST00000238628 ACACAQ13085 2346 aa9.26□□□□□ -0.93
IFT43-201ENST00000238628 ARHGAP6O43182 974 aa9.25□□□□□ -0.93
IFT43-201ENST00000238628 TADA2AO75478 443 aa9.25□□□□□ -0.93
IFT43-201ENST00000238628 PAPSS2O95340 614 aaPredicted RBP9.25□□□□□ -0.93
IFT43-201ENST00000238628 P4HBP07237 508 aaKnown RBP9.25□□□□□ -0.93
IFT43-201ENST00000238628 RPL17P18621 184 aaKnown RBP9.25□□□□□ -0.93
IFT43-201ENST00000238628 SSRP1Q08945 709 aaKnown RBP9.25□□□□□ -0.93
IFT43-201ENST00000238628 PCBP1Q15365 356 aaKnown RBP eCLIP9.25□□□□□ -0.93
IFT43-201ENST00000238628 XKR9Q5GH70 373 aa9.25□□□□□ -0.93
IFT43-201ENST00000238628 FUT10Q6P4F1 479 aa9.25□□□□□ -0.93
IFT43-201ENST00000238628 NOTUMQ6P988 496 aa9.25□□□□□ -0.93
IFT43-201ENST00000238628 BLOC1S2Q6QNY1 142 aa9.25□□□□□ -0.93
IFT43-201ENST00000238628 MOXD1Q6UVY6 613 aa9.25□□□□□ -0.93
IFT43-201ENST00000238628 GPR65Q8IYL9 337 aa9.25□□□□□ -0.93
IFT43-201ENST00000238628 TRIM22Q8IYM9 498 aa9.25□□□□□ -0.93
IFT43-201ENST00000238628 PIK3R5Q8WYR1 880 aa9.25□□□□□ -0.93
IFT43-201ENST00000238628 SLC39A7Q92504 469 aa9.25□□□□□ -0.93
IFT43-201ENST00000238628 CPB2Q96IY4 423 aa9.25□□□□□ -0.93
IFT43-201ENST00000238628 ZFP42Q96MM3 310 aa9.25□□□□□ -0.93
IFT43-201ENST00000238628 MBOAT7Q96N66 472 aa9.25□□□□□ -0.93
IFT43-201ENST00000238628 MTRQ99707 1265 aa9.25□□□□□ -0.93
IFT43-201ENST00000238628 TRIM6Q9C030 488 aaPredicted RBP9.25□□□□□ -0.93
IFT43-201ENST00000238628 CSRNP2Q9H175 543 aa9.25□□□□□ -0.93
IFT43-201ENST00000238628 SLC32A1Q9H598 525 aa9.25□□□□□ -0.93
IFT43-201ENST00000238628 CCDC86Q9H6F5 360 aaKnown RBP9.25□□□□□ -0.93
IFT43-201ENST00000238628 TMEM9BQ9NQ34 198 aa9.25□□□□□ -0.93
IFT43-201ENST00000238628 ADAM28Q9UKQ2 775 aa9.25□□□□□ -0.93
IFT43-201ENST00000238628 GIT1Q9Y2X7 761 aa9.25□□□□□ -0.93
IFT43-201ENST00000238628 NID2Q14112 1375 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 PCNX2A6NKB5 2137 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 INO80B-WBP1J3KQ70 363 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 J3QKU1 62 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 M0R2N6 131 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 MARCH6O60337 910 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 TSPAN1O60635 241 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 C1QL1O75973 258 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 CAVIN2O95810 425 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 AKAP5P24588 427 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 PDIA3P30101 505 aaKnown RBP9.24□□□□□ -0.93
IFT43-201ENST00000238628 HOXA6P31267 233 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 HOXC13P31276 330 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 YWHABP31946 246 aaKnown RBP9.24□□□□□ -0.93
IFT43-201ENST00000238628 PTENP60484 403 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 CREB5Q02930 508 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 CREMQ03060 361 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 PTGDRQ13258 359 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 PPP2R5CQ13362 524 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 LRRC32Q14392 662 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 GRM2Q14416 872 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 EMC2Q15006 297 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 EPHA7Q15375 998 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 INF2Q27J81 1249 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 BMP2KLQ5H9B9 411 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 PPM1LQ5SGD2 360 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 PRSS55Q6UWB4 352 aaPredicted RBP9.24□□□□□ -0.93
IFT43-201ENST00000238628 NPAS3Q8IXF0 933 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 C4orf19Q8IY42 314 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 HACE1Q8IYU2 909 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 FBXL16Q8N461 479 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 CHCHD4Q8N4Q1 142 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 ING5Q8WYH8 240 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 RABGGTAQ92696 567 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 KCNB2Q92953 911 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 CCDC51Q96ER9 411 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 MCRS1Q96EZ8 462 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 FAM20AQ96MK3 541 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 UBL7Q96S82 380 aaPredicted RBP9.24□□□□□ -0.93
IFT43-201ENST00000238628 NCOA5Q9HCD5 579 aaKnown RBP9.24□□□□□ -0.93
IFT43-201ENST00000238628 RBM12Q9NTZ6 932 aaKnown RBP9.24□□□□□ -0.93
IFT43-201ENST00000238628 KLK14Q9P0G3 267 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 WRAP73Q9P2S5 460 aaPredicted RBP9.24□□□□□ -0.93
IFT43-201ENST00000238628 PARP2Q9UGN5 583 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 PIAS3Q9Y6X2 628 aa9.24□□□□□ -0.93
IFT43-201ENST00000238628 USP9XQ93008 2570 aaPredicted RBP9.23□□□□□ -0.93
IFT43-201ENST00000238628 HECTD1Q9ULT8 2610 aa9.23□□□□□ -0.93
IFT43-201ENST00000238628 SPTA1P02549 2419 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms