RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 LRRC55Q6ZSA7 311 aa12.3□□□□□ -0.44
SF3B6-201ENST00000233468 HS2ST1Q7LGA3 356 aa12.3□□□□□ -0.44
SF3B6-201ENST00000233468 CD302Q8IX05 232 aa12.3□□□□□ -0.44
SF3B6-201ENST00000233468 ELOA2Q8IYF1 753 aaPredicted RBP12.3□□□□□ -0.44
SF3B6-201ENST00000233468 FMR1NBQ8N0W7 255 aaPredicted RBP12.3□□□□□ -0.44
SF3B6-201ENST00000233468 KLHL23Q8NBE8 558 aa12.3□□□□□ -0.44
SF3B6-201ENST00000233468 GOLGA5Q8TBA6 731 aa12.3□□□□□ -0.44
SF3B6-201ENST00000233468 POMGNT1Q8WZA1 660 aa12.3□□□□□ -0.44
SF3B6-201ENST00000233468 PABPC5Q96DU9 382 aaKnown RBP12.3□□□□□ -0.44
SF3B6-201ENST00000233468 TMEM169Q96HH4 297 aa12.3□□□□□ -0.44
SF3B6-201ENST00000233468 GBP3Q9H0R5 595 aa12.3□□□□□ -0.44
SF3B6-201ENST00000233468 NSUN3Q9H649 340 aaKnown RBP12.3□□□□□ -0.44
SF3B6-201ENST00000233468 PLEKHA5Q9HAU0 1116 aa12.3□□□□□ -0.44
SF3B6-201ENST00000233468 CLDND1Q9NY35 253 aa12.3□□□□□ -0.44
SF3B6-201ENST00000233468 CGNQ9P2M7 1197 aaKnown RBP12.3□□□□□ -0.44
SF3B6-201ENST00000233468 LZTS1Q9Y250 596 aa12.3□□□□□ -0.44
SF3B6-201ENST00000233468 USP20Q9Y2K6 914 aa12.3□□□□□ -0.44
SF3B6-201ENST00000233468 ARID2Q68CP9 1835 aa12.3□□□□□ -0.44
SF3B6-201ENST00000233468 A0A0B4J269 797 aa12.29□□□□□ -0.44
SF3B6-201ENST00000233468 MEIS3P2A8K0S8 358 aa12.29□□□□□ -0.44
SF3B6-201ENST00000233468 LINC01565O15544 149 aa12.29□□□□□ -0.44
SF3B6-201ENST00000233468 XPOTO43592 962 aaKnown RBP12.29□□□□□ -0.44
SF3B6-201ENST00000233468 FGF18O76093 207 aa12.29□□□□□ -0.44
SF3B6-201ENST00000233468 RPN1P04843 607 aaKnown RBP12.29□□□□□ -0.44
SF3B6-201ENST00000233468 MYBP10242 640 aa12.29□□□□□ -0.44
SF3B6-201ENST00000233468 GARTP22102 1010 aa12.29□□□□□ -0.44
SF3B6-201ENST00000233468 SCNN1GP51170 649 aa12.29□□□□□ -0.44
SF3B6-201ENST00000233468 BCAR1P56945 870 aa12.29□□□□□ -0.44
SF3B6-201ENST00000233468 OSTNP61366 133 aa12.29□□□□□ -0.44
SF3B6-201ENST00000233468 HYAL1Q12794 435 aa12.29□□□□□ -0.44
SF3B6-201ENST00000233468 TIGD5Q53EQ6 642 aa12.29□□□□□ -0.44
SF3B6-201ENST00000233468 CLEC17AQ6ZS10 378 aa12.29□□□□□ -0.44
SF3B6-201ENST00000233468 GRAMD1CQ8IYS0 662 aa12.29□□□□□ -0.44
SF3B6-201ENST00000233468 ZNF507Q8TCN5 953 aa12.29□□□□□ -0.44
SF3B6-201ENST00000233468 ZFP42Q96MM3 310 aa12.29□□□□□ -0.44
SF3B6-201ENST00000233468 COLEC11Q9BWP8 271 aa12.29□□□□□ -0.44
SF3B6-201ENST00000233468 NRDE2Q9H7Z3 1164 aa12.29□□□□□ -0.44
SF3B6-201ENST00000233468 RPF1Q9H9Y2 349 aaKnown RBP12.29□□□□□ -0.44
SF3B6-201ENST00000233468 ALG13Q9NP73 1137 aaKnown RBP12.29□□□□□ -0.44
SF3B6-201ENST00000233468 KLK14Q9P0G3 267 aa12.29□□□□□ -0.44
SF3B6-201ENST00000233468 AGO2Q9UKV8 859 aaKnown RBP12.29□□□□□ -0.44
SF3B6-201ENST00000233468 PLAGL2Q9UPG8 496 aa12.29□□□□□ -0.44
SF3B6-201ENST00000233468 FAN1Q9Y2M0 1017 aa12.29□□□□□ -0.44
SF3B6-201ENST00000233468 STYXL1Q9Y6J8 313 aa12.29□□□□□ -0.44
SF3B6-201ENST00000233468 FNDC1Q4ZHG4 1894 aaPredicted RBP12.28□□□□□ -0.44
SF3B6-201ENST00000233468 FSD2A1L4K1 749 aa12.28□□□□□ -0.44
SF3B6-201ENST00000233468 ABLIM1O14639 778 aa12.28□□□□□ -0.44
SF3B6-201ENST00000233468 PRPF40AO75400 957 aaKnown RBP12.28□□□□□ -0.44
SF3B6-201ENST00000233468 PRPF6O94906 941 aaKnown RBP12.28□□□□□ -0.44
SF3B6-201ENST00000233468 GALTP07902 379 aa12.28□□□□□ -0.44
SF3B6-201ENST00000233468 OR1G1P47890 313 aa12.28□□□□□ -0.44
SF3B6-201ENST00000233468 ZP2Q05996 745 aa12.28□□□□□ -0.44
SF3B6-201ENST00000233468 PPP2R3AQ06190 1150 aa12.28□□□□□ -0.44
SF3B6-201ENST00000233468 EHHADHQ08426 723 aa12.28□□□□□ -0.44
SF3B6-201ENST00000233468 DPYDQ12882 1025 aa12.28□□□□□ -0.44
SF3B6-201ENST00000233468 TUSC3Q13454 348 aa12.28□□□□□ -0.44
SF3B6-201ENST00000233468 SNW1Q13573 536 aaKnown RBP12.28□□□□□ -0.44
SF3B6-201ENST00000233468 CAMK1Q14012 370 aa12.28□□□□□ -0.44
SF3B6-201ENST00000233468 KCNB1Q14721 858 aa12.28□□□□□ -0.44
SF3B6-201ENST00000233468 KMT5BQ4FZB7 885 aa12.28□□□□□ -0.44
SF3B6-201ENST00000233468 ENGASEQ8NFI3 743 aa12.28□□□□□ -0.44
SF3B6-201ENST00000233468 MICAL1Q8TDZ2 1067 aa12.28□□□□□ -0.44
SF3B6-201ENST00000233468 ZBTB45Q96K62 511 aaPredicted RBP12.28□□□□□ -0.44
SF3B6-201ENST00000233468 UROC1Q96N76 676 aa12.28□□□□□ -0.44
SF3B6-201ENST00000233468 IGFLR1Q9H665 355 aa12.28□□□□□ -0.44
SF3B6-201ENST00000233468 KIAA1586Q9HCI6 787 aa12.28□□□□□ -0.44
SF3B6-201ENST00000233468 SLC39A2Q9NP94 309 aa12.28□□□□□ -0.44
SF3B6-201ENST00000233468 ARIH1Q9Y4X5 557 aaPredicted RBP12.28□□□□□ -0.44
SF3B6-201ENST00000233468 PRR33A8MZF0 331 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 NCK2O43639 380 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 RHOBTB3O94955 611 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 ITGB1P05556 798 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 KCNE1P15382 129 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 DNAJB1P25685 340 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 CASP1P29466 404 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 CASP5P51878 434 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 DSC1Q08554 894 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 BMT2Q1RMZ1 405 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 CTC1Q2NKJ3 1217 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 XKR4Q5GH76 650 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 ARMCX5Q6P1M9 558 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 EPM2AIP1Q7L775 607 aaPredicted RBP12.27□□□□□ -0.45
SF3B6-201ENST00000233468 ZNF280BQ86YH2 543 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 COLGALT2Q8IYK4 626 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 SLC39A11Q8N1S5 342 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 SPPL3Q8TCT6 385 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 POF1BQ8WVV4 589 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 SMARCE1Q969G3 411 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 IGSF21Q96ID5 467 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 SNX27Q96L92 541 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 GSDMAQ96QA5 445 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 ASB7Q9H672 318 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 NGRNQ9NPE2 291 aaKnown RBP12.27□□□□□ -0.45
SF3B6-201ENST00000233468 TLR9Q9NR96 1032 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 CNTN3Q9P232 1028 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 SSX2IPQ9Y2D8 614 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 ZNF318Q5VUA4 2279 aa12.27□□□□□ -0.45
SF3B6-201ENST00000233468 TECTAO75443 2155 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 PIEZO1Q92508 2521 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 SMIM28A0A1B0GU29 152 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms