RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Vmn2r53L7N473 806 aa22.73■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Nub1P54729 614 aa22.73■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Hace1Q3U0D9 909 aa22.73■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Q5XFZ0 217 aa22.73■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Pacsin1Q61644 441 aa22.73■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Klhl17Q6TDP3 640 aa22.73■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Celf4Q7TSY6 486 aa22.73■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Nucks1Q80XU3 234 aaKnown RBP22.73■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Hgh1Q8C3I8 393 aa22.73■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Tdrd7Q8K1H1 1086 aaKnown RBP22.73■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Rbm42Q91V81 474 aaKnown RBP22.73■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Pdk2Q9JK42 407 aa22.73■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Ptpn3A2ALK8 913 aa22.72■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Gimd1E9PW74 217 aa22.72■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Gm3164L7N2B9 238 aa22.72■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Gm3264L7N2C5 238 aa22.72■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Fzd1O70421 642 aa22.72■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Polr2fP61219 127 aa22.72■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 NeblQ0II04 452 aa22.72■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Nhej1Q3KNJ2 295 aa22.72■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Snx25Q3ZT31 840 aa22.72■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Scrn2Q8VCA8 425 aa22.72■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 NapgQ9CWZ7 312 aa22.72■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Lrrc57Q9D1G5 239 aa22.72■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Adamts9E9PUN6 1931 aa22.72■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Gnrh1P13562 90 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Ptpn11P35235 597 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Myl6Q60605 151 aaKnown RBP22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Prr11Q8BHE0 368 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Kcnv1Q8BZN2 503 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Cog3Q8CI04 820 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Lrrc45Q8CIM1 670 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Tcirg1Q9JHF5 834 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Uchl3Q9JKB1 230 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Zscan4-ps3A0A1B0GRH6 506 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Zscan4-ps2A0A1C7CYU6 506 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Gm1758F6VZZ1 202 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Gna15P30678 374 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Cdc25cP48967 447 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Oaz1P54369 227 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Pafah1b1P63005 410 aaKnown RBP22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Cct6bQ61390 531 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Kcnt1Q6ZPR4 1224 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Olfr23Q7TRX4 325 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Hook3Q8BUK6 718 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Slc13a4Q8BZ82 625 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Sbk1Q8QZX0 417 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Olfr393Q8VGR6 312 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Zfp64Q99KE8 643 aa22.71■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Gm4788E9Q8B5 879 aa22.7■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 H2afzP0C0S6 128 aa22.7■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Aimp1P31230 310 aaKnown RBP22.7■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Vamp7P70280 220 aa22.7■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Mark3Q03141 753 aa22.7■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 H2afvQ3THW5 128 aa22.7■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Frmd5Q6P5H6 517 aa22.7■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Frmd3Q8BHD4 595 aa22.7■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Elmo3Q8BYZ7 720 aa22.7■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Q8C5S3 137 aa22.7■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Adnp2Q8CHC8 1165 aaKnown RBP22.7■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Asb11Q9CQ31 323 aa22.7■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Rab11fip1Q9D620 645 aa22.7■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Chst7Q9EP78 484 aa22.7■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Nup50Q9JIH2 466 aaKnown RBP22.7■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Rfx5Q9JL61 658 aa22.7■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Dnajc12Q9R022 198 aa22.7■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Eif2ak3Q9Z2B5 1114 aa22.7■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 ThadaA8C756 1938 aa22.7■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 1700017N19RikA0A087WPJ1 469 aa22.69■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Map7d2A2AG50 781 aa22.69■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Zfp266E9Q2S7 604 aa22.69■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 ZfxP17012 799 aa22.69■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Sin3bQ62141 1098 aa22.69■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Znf12Q7TSI0 686 aa22.69■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Socs4Q91ZA6 436 aa22.69■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 CalcbQ99MP3 130 aa22.69■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Fam187aQ9D3R5 417 aa22.69■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 PigoQ9JJI6 1093 aa22.69■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Galk1Q9R0N0 392 aa22.69■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Cd97Q9Z0M6 818 aa22.69■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Atp6v0a1Q9Z1G4 839 aaKnown RBP22.69■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Arid3bQ9Z1N7 568 aa22.69■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Palb2Q3U0P1 1104 aa22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Gm5935Q497S0 212 aa22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Nxf2Q4ZGD8 691 aa22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 PoliQ6R3M4 717 aa22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Alas1Q8VC19 642 aa22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 FcrlaQ920A9 352 aa22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Wnt8bQ9WUD6 350 aa22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Efcab12V9GXH0 673 aa22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Xrcc6P23475 608 aa22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Dlg3P70175 849 aa22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Ano7Q14AT5 859 aa22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Grm2Q14BI2 872 aa22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Samd11Q1RNF8 542 aa22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Upf3bQ3ULL6 472 aa22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Vps72Q62481 368 aa22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Armcx2Q6A058 784 aaKnown RBP22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 IqceQ6PCQ0 778 aa22.68■■□□□ 1.22
Ccdc88a-202ENSMUST00000109477 Ppfibp1Q8C8U0 969 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms