RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Ncoa7Q6DFV7 943 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Fhod1Q6P9Q4 1197 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Snd1Q78PY7 910 aaKnown RBP24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Klhl11Q8CE33 709 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Lrrc45Q8CIM1 670 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Tdrd7Q8K1H1 1086 aaKnown RBP24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Ablim1Q8K4G5 861 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Creb3l3Q91XE9 479 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Uap1Q91YN5 522 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 JmyQ9QXM1 983 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 1700016G14RikA0A286YCZ6 238 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Plekha5E9Q6H8 1269 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Dync1i1O88485 628 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Nkx2-5P42582 318 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Ephb4P54761 987 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Myo1fP70248 1099 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Asprv1Q09PK2 339 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Sec31aQ3UPL0 1230 aaKnown RBP24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Papd7Q6PB75 542 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Znf579Q80VM4 562 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Gprc5aQ8BHL4 356 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Qsox1Q8BND5 748 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Klhl36Q8R124 613 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Spred2Q924S7 410 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Sar1bQ9CQC9 198 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Q9D2Q3 444 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Mgea5Q9EQQ9 916 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Gon4lQ9DB00 2260 aa24.36■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Osbpl7A2A716 963 aa24.36■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Gm13084A2A8N0 494 aa24.36■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Gm13941A2AJ38 245 aa24.36■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Unc13dB2RUP2 1085 aa24.36■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Dlg3P70175 849 aa24.36■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Meis3P97368 378 aa24.36■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Znf800Q0VEE6 662 aa24.36■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Styk1Q6J9G1 429 aa24.36■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Smoc2Q8CD91 447 aa24.36■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Fam160b1Q8CDM8 764 aa24.36■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Tada3Q8R0L9 432 aa24.36■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Rrp1bQ91YK2 724 aaKnown RBP24.36■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Drap1Q9D6N5 205 aa24.36■■□□□ 1.49
Scn1b-201ENSMUST00000098548 BC025446A0A087WQT1 134 aa24.35■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Gimd1E9PW74 217 aa24.35■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Actn4P57780 912 aaKnown RBP24.35■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Ttc39dQ0VF76 604 aa24.35■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Tmem202Q80W35 275 aa24.35■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Gm5591Q8CDK1 855 aa24.35■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Wdr11Q8K1X1 1223 aa24.35■■□□□ 1.49
Scn1b-201ENSMUST00000098548 EpgnQ924X1 152 aa24.35■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Fam111aQ9D2L9 613 aa24.35■■□□□ 1.49
Scn1b-201ENSMUST00000098548 PrameQ9D4Z5 464 aa24.35■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Mkrn2Q9ERV1 416 aaKnown RBP24.35■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Gm8298J3QPI0 401 aa24.34■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Tagap1P0CAX8 505 aa24.34■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Aldh2P47738 519 aaKnown RBP24.34■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Tubb5P99024 444 aaKnown RBP24.34■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Mark3Q03141 753 aa24.34■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Syce2Q505B8 171 aa24.34■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Fgfr1opQ66JX5 399 aa24.34■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Sbk1Q8QZX0 417 aa24.34■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Med10Q9CXU0 135 aa24.34■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Gm8882E9Q7E4 283 aa24.33■■□□□ 1.49
Scn1b-201ENSMUST00000098548 IkbkbO88351 757 aa24.33■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Aldh1a1P24549 501 aa24.33■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Ppp3caP63328 521 aa24.33■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Acot6Q32Q92 419 aa24.33■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Emc10Q3TAS6 258 aa24.33■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Bola2Q8BGS2 86 aa24.33■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Tmem117Q8BH18 514 aa24.33■■□□□ 1.49
Scn1b-201ENSMUST00000098548 PisdQ8BSF4 406 aa24.33■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Slc13a4Q8BZ82 625 aa24.33■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Lmo3Q8BZL8 145 aa24.33■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Ago2Q8CJG0 860 aaKnown RBP24.33■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Castor1Q9CWQ8 331 aa24.33■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Gtf3c6Q9D8P7 227 aa24.33■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Usp29Q9ES63 869 aa24.33■■□□□ 1.49
Scn1b-201ENSMUST00000098548 PigoQ9JJI6 1093 aa24.33■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Trim10Q9WUH5 489 aa24.33■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Adgrf5G5E8Q8 1348 aa24.33■■□□□ 1.48
Scn1b-201ENSMUST00000098548 Aoc3O70423 765 aa24.33■■□□□ 1.48
Scn1b-201ENSMUST00000098548 Lrrc4bP0C192 709 aa24.33■■□□□ 1.48
Scn1b-201ENSMUST00000098548 Xrcc6P23475 608 aa24.33■■□□□ 1.48
Scn1b-201ENSMUST00000098548 Tcp11Q01755 566 aa24.33■■□□□ 1.48
Scn1b-201ENSMUST00000098548 Mapk6Q61532 720 aa24.33■■□□□ 1.48
Scn1b-201ENSMUST00000098548 Sorbs1Q62417 1290 aa24.33■■□□□ 1.48
Scn1b-201ENSMUST00000098548 Depdc1bQ8BH88 529 aa24.33■■□□□ 1.48
Scn1b-201ENSMUST00000098548 Zc3h6Q8BYK8 1177 aa24.33■■□□□ 1.48
Scn1b-201ENSMUST00000098548 Nup58Q8R332 587 aa24.33■■□□□ 1.48
Scn1b-201ENSMUST00000098548 B4galt3Q91YY2 395 aa24.33■■□□□ 1.48
Scn1b-201ENSMUST00000098548 MutyhQ99P21 515 aa24.33■■□□□ 1.48
Scn1b-201ENSMUST00000098548 Tlr2Q9QUN7 784 aa24.33■■□□□ 1.48
Scn1b-201ENSMUST00000098548 Map7d2A2AG50 781 aa24.32■■□□□ 1.48
Scn1b-201ENSMUST00000098548 1700064H15RikD3Z4D4 81 aa24.32■■□□□ 1.48
Scn1b-201ENSMUST00000098548 Tcp1P11983 556 aaKnown RBP24.32■■□□□ 1.48
Scn1b-201ENSMUST00000098548 Scarf2P59222 833 aa24.32■■□□□ 1.48
Scn1b-201ENSMUST00000098548 Gm5935Q497S0 212 aa24.32■■□□□ 1.48
Scn1b-201ENSMUST00000098548 Zbtb8osQ505B7 168 aa24.32■■□□□ 1.48
Scn1b-201ENSMUST00000098548 Dlg4Q62108 724 aa24.32■■□□□ 1.48
Scn1b-201ENSMUST00000098548 ChpfQ6IQX7 774 aa24.32■■□□□ 1.48
Scn1b-201ENSMUST00000098548 Tmem260Q8BMD6 703 aa24.32■■□□□ 1.48
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms