RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Ttc37F8VPK0 1563 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Oog1E9Q5G7 496 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Meis3P97368 378 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Mrps31Q61733 384 aaKnown RBP17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Tpd52Q62393 224 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Tspyl5Q69ZB3 406 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Mtmr10Q7TPM9 771 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Vcpip1Q8CDG3 1220 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Wrap53Q8VC51 532 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Wars2Q9CYK1 360 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Ola1Q9CZ30 396 aaKnown RBP17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Nt5c3aQ9D020 331 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 PpihQ9D868 188 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Ifi202Q9R002 445 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Tk2Q9R088 270 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Slc22a3Q9WTW5 551 aa17.48■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Gm36028A0A0U1RPM1 299 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Acnat1A2AKK5 416 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Usp17lbE9Q9U0 468 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Serpinb3aG3X9V8 387 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 E2f6O54917 272 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Mxi1P50540 228 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 YwhahP68510 246 aaKnown RBP17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Ano5Q75UR0 904 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Gm10134F6ZQC6 126 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Zfp454Q80Y34 536 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Galnt5Q8C102 930 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Tmem120aQ8C1E7 343 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Tmem145Q8C4U2 746 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Tbc1d10cQ8C9V1 444 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Slc8a2Q8K596 921 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Rpa1Q8VEE4 623 aaKnown RBP17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Pcdhgb4Q91XX6 912 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Tob2Q9JM55 345 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 GgcxQ9QYC7 757 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Etnk2A7MCT6 385 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 PkmP52480 531 aaKnown RBP17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Ccdc127Q3TC33 260 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Serpinb6dQ3UWK8 375 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Nfe2l2Q60795 597 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Drd5Q8BLD9 478 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Mtmr6Q8VE11 617 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 ChiaQ91XA9 473 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 CebpaP53566 359 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Tmem26Q3UP23 366 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Pop1Q8K205 1045 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Appl1Q8K3H0 707 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Fbxw7Q8VBV4 629 aa17.47■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Gm10250G3X9L6 160 aaKnown RBP17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Kdm7aQ3UWM4 940 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 ArhgdiaQ99PT1 204 aaKnown RBP17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Nsmce3Q9CPR8 279 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Atp5hQ9DCX2 161 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Fads3Q9JJE7 449 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Itgb1bp2Q9R000 350 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 DtnbO70585 659 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Atxn7l3bQ3UD01 97 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Krt35Q497I4 455 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Prkaa1Q5EG47 559 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Slitrk3Q810B9 980 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Ttc7aQ8BGB2 858 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Golph3Q9CRA5 298 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Q9D937 123 aaKnown RBP17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Ccdc62E9PVD1 701 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Zfp558E9Q1J0 407 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Cyp2d10P24456 504 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Slc12a1P55014 1095 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Tfdp2Q64163 446 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Zbtb41Q811F1 908 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Ppp1r12bQ8BG95 976 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Frmd4aQ8BIE6 1020 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Pcdha9Q91Y11 979 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Fam205aA2APU8 1308 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Ankfn1A0A140LIW7 1083 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Pdzd8B9EJ80 1147 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Gm4871D3Z0W7 314 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Zfp788E9Q980 884 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 GclmO09172 274 aaKnown RBP17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Mif4gdQ3UBZ5 222 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Vmn1r214Q8R279 367 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Xpo6Q924Z6 1125 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 PrameQ9D4Z5 464 aa17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Mrps9Q9D7N3 390 aaKnown RBP17.46■□□□□ 0.39
Ubfd1-201ENSMUST00000033158 Znf541Q0GGX2 1363 aa17.46■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Hsf3D0VYS2 492 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Hmx1O70218 332 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Tmprss11aQ3UQ41 389 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 4933427I04RikQ3V053 235 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Tll1Q62381 1013 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 RetsatQ64FW2 609 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Olfr805Q8VFI4 319 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Atp11cQ9QZW0 1129 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Stk11Q9WTK7 436 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 B3galt4Q9Z0F0 371 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Rexo5D3YW29 759 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Ccdc144bE9PVZ3 520 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Rfpl4bJ3QPR6 266 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Ppp3ccP48455 513 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Pcsk1P63239 753 aa17.45■□□□□ 0.38
Ubfd1-201ENSMUST00000033158 Npas2P97460 816 aa17.45■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms