RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 DNAJB1P25685 340 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 PHKA2P46019 1235 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 GPC3P51654 580 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 TMEM62Q0P6H9 643 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 PAK1Q13153 545 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 BMT2Q1RMZ1 405 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 ZC2HC1CQ53FD0 456 aaPredicted RBP10.29□□□□□ -0.76
PHGDH-228ENST00000641847 CDCA2Q69YH5 1023 aaPredicted RBP10.29□□□□□ -0.76
PHGDH-228ENST00000641847 KLHL10Q6JEL2 608 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 ZNF720Q7Z2F6 126 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 HAUS6Q7Z4H7 955 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 ZBTB8OSQ8IWT0 167 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 NELFCDQ8IXH7 590 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 GUF1Q8N442 669 aaKnown RBP10.29□□□□□ -0.76
PHGDH-228ENST00000641847 TMEM161BQ8NDZ6 487 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 NELFBQ8WX92 580 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 NLRP7Q8WX94 980 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 SCLT1Q96NL6 688 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 FTHL17Q9BXU8 183 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 NAT10Q9H0A0 1025 aaKnown RBP10.29□□□□□ -0.76
PHGDH-228ENST00000641847 ST6GALNAC4Q9H4F1 302 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 ARHGAP28Q9P2N2 729 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 KCNG1Q9UIX4 513 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 LRFN2Q9ULH4 789 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 PCDHB13Q9Y5F0 798 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 PHLPP2Q6ZVD8 1323 aa10.29□□□□□ -0.76
PHGDH-228ENST00000641847 PLXNA3P51805 1871 aa10.28□□□□□ -0.76
PHGDH-228ENST00000641847 SP100P23497 879 aaPredicted RBP10.28□□□□□ -0.76
PHGDH-228ENST00000641847 ABCD1P33897 745 aa10.28□□□□□ -0.76
PHGDH-228ENST00000641847 STX17P56962 302 aa10.28□□□□□ -0.76
PHGDH-228ENST00000641847 NLRP11P59045 1033 aaKnown RBP10.28□□□□□ -0.76
PHGDH-228ENST00000641847 GTF2BQ00403 316 aa10.28□□□□□ -0.76
PHGDH-228ENST00000641847 DUSP6Q16828 381 aa10.28□□□□□ -0.76
PHGDH-228ENST00000641847 KIZQ2M2Z5 673 aa10.28□□□□□ -0.76
PHGDH-228ENST00000641847 PAN2Q504Q3 1202 aaKnown RBP10.28□□□□□ -0.76
PHGDH-228ENST00000641847 CT47A1Q5JQC4 288 aaPredicted RBP10.28□□□□□ -0.76
PHGDH-228ENST00000641847 ZNF410Q86VK4 478 aa10.28□□□□□ -0.76
PHGDH-228ENST00000641847 NPAS4Q8IUM7 802 aa10.28□□□□□ -0.76
PHGDH-228ENST00000641847 MAP4K3Q8IVH8 894 aa10.28□□□□□ -0.76
PHGDH-228ENST00000641847 KIAA2013Q8IYS2 634 aa10.28□□□□□ -0.76
PHGDH-228ENST00000641847 FLCNQ8NFG4 579 aa10.28□□□□□ -0.76
PHGDH-228ENST00000641847 ZNF507Q8TCN5 953 aa10.28□□□□□ -0.76
PHGDH-228ENST00000641847 HVCN1Q96D96 273 aa10.28□□□□□ -0.76
PHGDH-228ENST00000641847 DHTKD1Q96HY7 919 aaPredicted RBP10.28□□□□□ -0.76
PHGDH-228ENST00000641847 CNTNAP3BQ96NU0 1288 aa10.28□□□□□ -0.76
PHGDH-228ENST00000641847 ACCSQ96QU6 501 aa10.28□□□□□ -0.76
PHGDH-228ENST00000641847 NTPCRQ9BSD7 190 aaKnown RBP10.28□□□□□ -0.76
PHGDH-228ENST00000641847 STRA6Q9BX79 667 aa10.28□□□□□ -0.76
PHGDH-228ENST00000641847 CNTNAP3Q9BZ76 1288 aa10.28□□□□□ -0.76
PHGDH-228ENST00000641847 C2orf40Q9H1Z8 148 aa10.28□□□□□ -0.76
PHGDH-228ENST00000641847 PUF60Q9UHX1 559 aaKnown RBP10.28□□□□□ -0.76
PHGDH-228ENST00000641847 PCDHGC5Q9Y5F6 944 aa10.28□□□□□ -0.76
PHGDH-228ENST00000641847 KMT2BQ9UMN6 2715 aaPredicted RBP10.27□□□□□ -0.76
PHGDH-228ENST00000641847 NLRC5Q86WI3 1866 aa10.27□□□□□ -0.76
PHGDH-228ENST00000641847 A0A087WZ62 844 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 TRIM49BA6NDI0 452 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 M0QZ92 97 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 GPR32O75388 356 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 CAVIN2O95810 425 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 CHRNA1P02708 482 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 SDHBP21912 280 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 SCP2P22307 547 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 ERCC5P28715 1186 aaPredicted RBP10.27□□□□□ -0.77
PHGDH-228ENST00000641847 HOXD13P35453 343 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 ZNF165P49910 485 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 EFNA5P52803 228 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 PTENP60484 403 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 MRPS6P82932 125 aaKnown RBP10.27□□□□□ -0.77
PHGDH-228ENST00000641847 MBTD1Q05BQ5 628 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 KCNA1Q09470 495 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 STRN3Q13033 797 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 ANGPT1Q15389 498 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 KNOP1Q1ED39 458 aaKnown RBP10.27□□□□□ -0.77
PHGDH-228ENST00000641847 ANKRD54Q6NXT1 300 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 ZC3H14Q6PJT7 736 aaKnown RBP10.27□□□□□ -0.77
PHGDH-228ENST00000641847 TMEM184AQ6ZMB5 413 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 TSHZ1Q6ZSZ6 1077 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 TAS1R3Q7RTX0 852 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 GAS2L3Q86XJ1 694 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 NME8Q8N427 588 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 AOPEPQ8N6M6 819 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 FAM200AQ8TCP9 573 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 KCNN1Q92952 543 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 OSMRQ99650 979 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 TSG101Q99816 390 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 BPIFA3Q9BQP9 254 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 RTP3Q9BQQ7 232 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 FDXACB1Q9BRP7 624 aaPredicted RBP10.27□□□□□ -0.77
PHGDH-228ENST00000641847 NFKBIZQ9BYH8 718 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 CCDC113Q9H0I3 377 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 ADAMTS10Q9H324 1103 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 TMEM206Q9H813 350 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 CBX8Q9HC52 389 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 RWDD2AQ9UIY3 292 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 TBX20Q9UMR3 447 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 EXOC7Q9UPT5 735 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 GINS2Q9Y248 185 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 TRPV2Q9Y5S1 764 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 CHD6Q8TD26 2715 aa10.27□□□□□ -0.77
PHGDH-228ENST00000641847 BICDL2A1A5D9 508 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms