RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 TMEM191BP0C7N4 346 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 SRGAP2CP0DJJ0 459 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 CYP2C8P10632 490 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 P4HA1P13674 534 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 CYP11B1P15538 503 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 MARK3P27448 753 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 GBP1P32455 592 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 TNNT3P45378 269 aaPredicted RBP8.93□□□□□ -0.98
PNKP-231ENST00000640501 EPHB4P54760 987 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 SOX10P56693 466 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 MCL1Q07820 350 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 PAK2Q13177 524 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 CUL2Q13617 745 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 PCBP1Q15365 356 aaKnown RBP eCLIP8.93□□□□□ -0.98
PNKP-231ENST00000640501 DUOXA2Q1HG44 320 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 SGSM1Q2NKQ1 1148 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 HSDL1Q3SXM5 330 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 IQSEC1Q6DN90 963 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 EFCAB12Q6NXP0 572 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 EMBQ6PCB8 327 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 MPZL3Q6UWV2 235 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 MAMDC4Q6UXC1 1216 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 DLK2Q6UY11 383 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 TAS1R3Q7RTX0 852 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 PLEKHH3Q7Z736 793 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 GPIHBP1Q8IV16 184 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 BRSK2Q8IWQ3 736 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 TTC39CQ8N584 583 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 METTL13Q8N6R0 699 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 LRRC57Q8N9N7 239 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 USP38Q8NB14 1042 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 NOA1Q8NC60 698 aaKnown RBP8.93□□□□□ -0.98
PNKP-231ENST00000640501 HELQQ8TDG4 1101 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 EPS8L1Q8TE68 723 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 MAIP1Q8WWC4 291 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.93□□□□□ -0.98
PNKP-231ENST00000640501 WNT8AQ9H1J5 351 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 SLITRK6Q9H5Y7 841 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 FAM124BQ9H5Z6 455 aaPredicted RBP8.93□□□□□ -0.98
PNKP-231ENST00000640501 MRPL47Q9HD33 250 aaKnown RBP8.93□□□□□ -0.98
PNKP-231ENST00000640501 MED4Q9NPJ6 270 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 AJAP1Q9UKB5 411 aaPredicted RBP8.93□□□□□ -0.98
PNKP-231ENST00000640501 TTC7AQ9ULT0 858 aaPredicted RBP8.93□□□□□ -0.98
PNKP-231ENST00000640501 CEP83Q9Y592 693 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 SCINQ9Y6U3 715 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 ZSWIM8A7E2V4 1837 aa8.93□□□□□ -0.98
PNKP-231ENST00000640501 ADGRA2Q96PE1 1338 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 CCDC66A2RUB6 948 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 RRN3P2A6NIE6 340 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 SPDYE4A6NLX3 237 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 BTBD19C9JJ37 291 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 INO80B-WBP1J3KQ70 363 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 SOCS7O14512 581 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 CYP26A1O43174 497 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 NCK2O43639 380 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 MSCO60682 206 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 ARIH2O95376 493 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 C4BPAP04003 597 aaKnown RBP8.92□□□□□ -0.98
PNKP-231ENST00000640501 CXCR5P32302 372 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 CETN2P41208 172 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 SLC1A1P43005 524 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 NSFP46459 744 aaKnown RBP8.92□□□□□ -0.98
PNKP-231ENST00000640501 ACOT2P49753 483 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 INHBEP58166 350 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 NLRP11P59045 1033 aaKnown RBP8.92□□□□□ -0.98
PNKP-231ENST00000640501 VSNL1P62760 191 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 CBX1P83916 185 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 C2orf54Q08AI8 447 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 FSTL1Q12841 308 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 NNTQ13423 1086 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 DGKDQ16760 1214 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 FAM187BQ17R55 369 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 ZNF568Q3ZCX4 644 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 BEND6Q5SZJ8 279 aaPredicted RBP8.92□□□□□ -0.98
PNKP-231ENST00000640501 SEL1L2Q5TEA6 688 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 ATF7IP2Q5U623 682 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 SPRYD7Q5W111 196 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 MAP1SQ66K74 1059 aaPredicted RBP8.92□□□□□ -0.98
PNKP-231ENST00000640501 ACAD10Q6JQN1 1059 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 TSHZ1Q6ZSZ6 1077 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 GPR142Q7Z601 462 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 NT5DC4Q86YG4 428 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 PLEKHO2Q8TD55 490 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 ZNF526Q8TF50 670 aaPredicted RBP8.92□□□□□ -0.98
PNKP-231ENST00000640501 COG1Q8WTW3 980 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 ZNF653Q96CK0 615 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 HES6Q96HZ4 224 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 VCPIP1Q96JH7 1222 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 NLRP4Q96MN2 994 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 SCLT1Q96NL6 688 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 RUFY1Q96T51 708 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 PNKPQ96T60 521 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 ACO2Q99798 780 aaKnown RBP8.92□□□□□ -0.98
PNKP-231ENST00000640501 ARID3AQ99856 593 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 ADPGKQ9BRR6 497 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 INO80BQ9C086 356 aaPredicted RBP8.92□□□□□ -0.98
PNKP-231ENST00000640501 CCDC113Q9H0I3 377 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 RAB17Q9H0T7 212 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 THAP2Q9H0W7 228 aa8.92□□□□□ -0.98
PNKP-231ENST00000640501 RPF1Q9H9Y2 349 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms