RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 TRPM4Q8TD43 1214 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 CCT6BQ92526 530 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 CCDC127Q96BQ5 260 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 IQCDQ96DY2 449 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 DNAJC12Q9UKB3 198 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 TMCO1Q9UM00 188 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 ZNF541Q9H0D2 1346 aa13.25□□□□□ -0.29
SPIN3-236ENST00000640131 POLR2AP24928 1970 aaKnown RBP13.25□□□□□ -0.29
SPIN3-236ENST00000640131 GRID2IPA4D2P6 1211 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 GMNCA6NCL1 334 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 SRRM3A6NNA2 597 aaPredicted RBP13.24□□□□□ -0.29
SPIN3-236ENST00000640131 ABLIM1O14639 778 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 KRT14P02533 472 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 YWHABP31946 246 aaKnown RBP13.24□□□□□ -0.29
SPIN3-236ENST00000640131 FMO5P49326 533 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 RARRES1P49788 294 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 LBRQ14739 615 aaKnown RBP13.24□□□□□ -0.29
SPIN3-236ENST00000640131 TRADDQ15628 312 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 QPCTQ16769 361 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 RNF220Q5VTB9 566 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 ZNF746Q6NUN9 644 aaPredicted RBP13.24□□□□□ -0.29
SPIN3-236ENST00000640131 PALB2Q86YC2 1186 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 TSEN2Q8NCE0 465 aaKnown RBP13.24□□□□□ -0.29
SPIN3-236ENST00000640131 KIFAP3Q92845 792 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 KAT5Q92993 513 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 KCNK3O14649 394 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 CALCAP01258 141 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 DRAP1Q14919 205 aaPredicted RBP13.24□□□□□ -0.29
SPIN3-236ENST00000640131 TNIP1Q15025 636 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 BMT2Q1RMZ1 405 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 ADAT2Q7Z6V5 191 aaKnown RBP13.24□□□□□ -0.29
SPIN3-236ENST00000640131 ERICH1Q86X53 443 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 IQCF2Q8IXL9 164 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 POP1Q99575 1024 aaKnown RBP13.24□□□□□ -0.29
SPIN3-236ENST00000640131 AIPL1Q9NZN9 384 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 NAGPAQ9UK23 515 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 PPP1R9AQ9ULJ8 1098 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 GMEB1Q9Y692 573 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 KIAA1217Q5T5P2 1943 aa13.24□□□□□ -0.29
SPIN3-236ENST00000640131 COL11A1P12107 1806 aaPredicted RBP13.23□□□□□ -0.29
SPIN3-236ENST00000640131 PDHA1P08559 390 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 FKBP1CQ5VVH2 108 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 ZNF662Q6ZS27 426 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 ZBTB8BQ8NAP8 495 aaPredicted RBP13.23□□□□□ -0.29
SPIN3-236ENST00000640131 IFT81Q8WYA0 676 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 IWS1Q96ST2 819 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 OSGEPQ9NPF4 335 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 TAS2R14Q9NYV8 317 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 EMSYQ7Z589 1322 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 P4HBP07237 508 aaKnown RBP13.23□□□□□ -0.29
SPIN3-236ENST00000640131 PAFAH1B1P43034 410 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 QARSP47897 775 aaKnown RBP13.23□□□□□ -0.29
SPIN3-236ENST00000640131 MYL7Q01449 175 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 NAB2Q15742 525 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 MTMR14Q8NCE2 650 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 NLGN2Q8NFZ4 835 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 ZIM3Q96PE6 472 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 AP1M1Q9BXS5 423 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 METTL14Q9HCE5 456 aaKnown RBP13.23□□□□□ -0.29
SPIN3-236ENST00000640131 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.23□□□□□ -0.29
SPIN3-236ENST00000640131 VWA5AO00534 786 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 DDX3XO00571 662 aaKnown RBP eCLIP13.23□□□□□ -0.29
SPIN3-236ENST00000640131 PJA2O43164 708 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 ZBED4O75132 1171 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 TMCC1O94876 653 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 TNFAIP1Q13829 316 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 SGSM1Q2NKQ1 1148 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 TMEM154Q6P9G4 183 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 KRT12Q99456 494 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 PDCD2LQ9BRP1 358 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 EDEM3Q9BZQ6 932 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 KIAA1683Q9H0B3 1180 aa13.23□□□□□ -0.29
SPIN3-236ENST00000640131 INTS2Q9H0H0 1204 aaKnown RBP13.23□□□□□ -0.29
SPIN3-236ENST00000640131 DMAP1Q9NPF5 467 aaPredicted RBP13.23□□□□□ -0.29
SPIN3-236ENST00000640131 BARX2Q9UMQ3 279 aaPredicted RBP13.23□□□□□ -0.29
SPIN3-236ENST00000640131 PCK1P35558 622 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 PPP3CAQ08209 521 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 FSTL1Q12841 308 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 LLGL1Q15334 1064 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 B3GNT9Q6UX72 402 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 SEPT14Q6ZU15 432 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 LNX1Q8TBB1 728 aaPredicted RBP13.22□□□□□ -0.29
SPIN3-236ENST00000640131 SLC20A1Q8WUM9 679 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 RIT2Q99578 217 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 PXMP2Q9NR77 195 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 TOPORSQ9NS56 1045 aaPredicted RBP13.22□□□□□ -0.29
SPIN3-236ENST00000640131 ATP8A1Q9Y2Q0 1164 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 IGSF9BQ9UPX0 1349 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 KRT38O76015 456 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 ALADP13716 330 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 ATP2A2P16615 1042 aaKnown RBP13.22□□□□□ -0.29
SPIN3-236ENST00000640131 BYSLQ13895 437 aaKnown RBP13.22□□□□□ -0.29
SPIN3-236ENST00000640131 ZNF268Q14587 947 aaPredicted RBP13.22□□□□□ -0.29
SPIN3-236ENST00000640131 EMC10Q5UCC4 262 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 PHLDB3Q6NSJ2 640 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 C8orf74Q6P047 294 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 CEP128Q6ZU80 1094 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 HAUS6Q7Z4H7 955 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 MCF2L2Q86YR7 1114 aa13.22□□□□□ -0.29
SPIN3-236ENST00000640131 ARHGEF19Q8IW93 802 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms