RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 KAT6AQ92794 2004 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 DNAH12Q6ZR08 3092 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 MYADML2A6NDP7 307 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 ZBTB42B2RXF5 422 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 HBP1O60381 514 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 ADAMTS4O75173 837 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 TBCAO75347 108 aaKnown RBP8.75□□□□□ -1.01
SCARB2-220ENST00000640076 PGK1P00558 417 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 F2P00734 622 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 C6orf222P0C671 652 aaPredicted RBP8.75□□□□□ -1.01
SCARB2-220ENST00000640076 SCP2P22307 547 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 COASYQ13057 564 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 MAPK7Q13164 816 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 GRAMD1BQ3KR37 738 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 ACBD5Q5T8D3 534 aaPredicted RBP8.75□□□□□ -1.01
SCARB2-220ENST00000640076 ZNF658Q5TYW1 1059 aaPredicted RBP8.75□□□□□ -1.01
SCARB2-220ENST00000640076 C11orf57Q6ZUT1 292 aaPredicted RBP8.75□□□□□ -1.01
SCARB2-220ENST00000640076 TCEAL8Q8IYN2 117 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 DAW1Q8N136 415 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 ST13P5Q8NFI4 369 aaPredicted RBP8.75□□□□□ -1.01
SCARB2-220ENST00000640076 OR6P1Q8NGX9 317 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 ZDHHC1Q8WTX9 485 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 HPS3Q969F9 1004 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 ZNF669Q96BR6 464 aaPredicted RBP8.75□□□□□ -1.01
SCARB2-220ENST00000640076 PPCSQ9HAB8 311 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 XPNPEP3Q9NQH7 507 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 PDLIM7Q9NR12 457 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 DDX20Q9UHI6 824 aaKnown RBP8.75□□□□□ -1.01
SCARB2-220ENST00000640076 ODF2LQ9ULJ1 636 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 LZTS1Q9Y250 596 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 TLR6Q9Y2C9 796 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 GDAQ9Y2T3 454 aa8.75□□□□□ -1.01
SCARB2-220ENST00000640076 HIP1RO75146 1068 aa8.74□□□□□ -1.01
SCARB2-220ENST00000640076 PHACTR2O75167 634 aa8.74□□□□□ -1.01
SCARB2-220ENST00000640076 DGAT1O75907 488 aa8.74□□□□□ -1.01
SCARB2-220ENST00000640076 ZNF131P52739 623 aa8.74□□□□□ -1.01
SCARB2-220ENST00000640076 STK4Q13043 487 aa8.74□□□□□ -1.01
SCARB2-220ENST00000640076 CTC1Q2NKJ3 1217 aa8.74□□□□□ -1.01
SCARB2-220ENST00000640076 HERC4Q5GLZ8 1057 aaPredicted RBP8.74□□□□□ -1.01
SCARB2-220ENST00000640076 GNASQ5JWF2 1037 aa8.74□□□□□ -1.01
SCARB2-220ENST00000640076 SNAP47Q5SQN1 464 aa8.74□□□□□ -1.01
SCARB2-220ENST00000640076 NXNQ6DKJ4 435 aa8.74□□□□□ -1.01
SCARB2-220ENST00000640076 GALNT12Q8IXK2 581 aa8.74□□□□□ -1.01
SCARB2-220ENST00000640076 SMYD4Q8IYR2 804 aaPredicted RBP8.74□□□□□ -1.01
SCARB2-220ENST00000640076 MLKLQ8NB16 471 aa8.74□□□□□ -1.01
SCARB2-220ENST00000640076 MCPH1Q8NEM0 835 aa8.74□□□□□ -1.01
SCARB2-220ENST00000640076 KAT2BQ92831 832 aa8.74□□□□□ -1.01
SCARB2-220ENST00000640076 TIPINQ9BVW5 301 aa8.74□□□□□ -1.01
SCARB2-220ENST00000640076 ZHX3Q9H4I2 956 aa8.74□□□□□ -1.01
SCARB2-220ENST00000640076 DHX33Q9H6R0 707 aaKnown RBP8.74□□□□□ -1.01
SCARB2-220ENST00000640076 POLD4Q9HCU8 107 aa8.74□□□□□ -1.01
SCARB2-220ENST00000640076 XPNPEP1Q9NQW7 623 aa8.74□□□□□ -1.01
SCARB2-220ENST00000640076 TAGLN3Q9UI15 199 aa8.74□□□□□ -1.01
SCARB2-220ENST00000640076 ZNF232Q9UNY5 417 aa8.74□□□□□ -1.01
SCARB2-220ENST00000640076 VPS9D1Q9Y2B5 631 aa8.74□□□□□ -1.01
SCARB2-220ENST00000640076 MRPS23Q9Y3D9 190 aaKnown RBP8.74□□□□□ -1.01
SCARB2-220ENST00000640076 SCN10AQ9Y5Y9 1956 aa8.74□□□□□ -1.01
SCARB2-220ENST00000640076 MSCO60682 206 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 KPNA6O60684 536 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 CAVIN2O95810 425 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 HSPA1AP0DMV8 641 aaKnown RBP8.73□□□□□ -1.01
SCARB2-220ENST00000640076 HSPA1BP0DMV9 641 aaKnown RBP8.73□□□□□ -1.01
SCARB2-220ENST00000640076 GAP43P17677 238 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 POLGP54098 1239 aaPredicted RBP8.73□□□□□ -1.01
SCARB2-220ENST00000640076 PURAQ00577 322 aaKnown RBP8.73□□□□□ -1.01
SCARB2-220ENST00000640076 PIN1Q13526 163 aaPredicted RBP8.73□□□□□ -1.01
SCARB2-220ENST00000640076 CAMK2GQ13555 558 aaPredicted RBP8.73□□□□□ -1.01
SCARB2-220ENST00000640076 EMC2Q15006 297 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 SETDB1Q15047 1291 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 FAM26FQ5R3K3 315 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 MAEAQ7L5Y9 396 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 SFR1Q86XK3 245 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 KIAA0895Q8NCT3 520 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 SLC7A3Q8WY07 619 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 GTPBP4Q9BZE4 634 aaKnown RBP8.73□□□□□ -1.01
SCARB2-220ENST00000640076 PHACTR1Q9C0D0 580 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 ATP6V0A4Q9HBG4 840 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 PARVGQ9HBI0 331 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 PTPRHQ9HD43 1115 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 GPRC5CQ9NQ84 441 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 PCDHA2Q9Y5H9 948 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 EVPLQ92817 2033 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 HAS3O00219 553 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 MAFO75444 373 aaPredicted RBP8.73□□□□□ -1.01
SCARB2-220ENST00000640076 MYL3P08590 195 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 INSRRP14616 1297 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 CST5P28325 142 aaPredicted RBP8.73□□□□□ -1.01
SCARB2-220ENST00000640076 CTCFP49711 727 aaPredicted RBP8.73□□□□□ -1.01
SCARB2-220ENST00000640076 ZNF165P49910 485 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 LBX1P52954 281 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 SOX10P56693 466 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 LMNB2Q03252 620 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 TBC1D8BQ0IIM8 1120 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 KIAA0753Q2KHM9 967 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 SLC9C1Q4G0N8 1177 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 SEZ6Q53EL9 994 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 ZNF484Q5JVG2 852 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 LHX8Q68G74 356 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 CYP2U1Q7Z449 544 aa8.73□□□□□ -1.01
SCARB2-220ENST00000640076 CTU1Q7Z7A3 348 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms