RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.25■□□□□ 0.19
TRIM3-215ENST00000639856 THAP2Q9H0W7 228 aa16.25■□□□□ 0.19
TRIM3-215ENST00000639856 RNPEPQ9H4A4 650 aa16.25■□□□□ 0.19
TRIM3-215ENST00000639856 SMARCAD1Q9H4L7 1026 aa16.25■□□□□ 0.19
TRIM3-215ENST00000639856 COQ4Q9Y3A0 265 aa16.25■□□□□ 0.19
TRIM3-215ENST00000639856 EVPLQ92817 2033 aa16.25■□□□□ 0.19
TRIM3-215ENST00000639856 GOLGA6BA6NDN3 693 aa16.25■□□□□ 0.19
TRIM3-215ENST00000639856 GH1P01241 217 aa16.25■□□□□ 0.19
TRIM3-215ENST00000639856 LIG4P49917 911 aa16.25■□□□□ 0.19
TRIM3-215ENST00000639856 STRN3Q13033 797 aa16.25■□□□□ 0.19
TRIM3-215ENST00000639856 NNTQ13423 1086 aa16.25■□□□□ 0.19
TRIM3-215ENST00000639856 TAF1CQ15572 869 aaPredicted RBP16.25■□□□□ 0.19
TRIM3-215ENST00000639856 AFG1LQ8WV93 481 aa16.25■□□□□ 0.19
TRIM3-215ENST00000639856 KAT5Q92993 513 aa16.25■□□□□ 0.19
TRIM3-215ENST00000639856 ARHGEF26Q96DR7 871 aa16.25■□□□□ 0.19
TRIM3-215ENST00000639856 FAM84AQ96KN4 292 aa16.25■□□□□ 0.19
TRIM3-215ENST00000639856 HAPLN2Q9GZV7 340 aa16.25■□□□□ 0.19
TRIM3-215ENST00000639856 TMEM8AQ9HCN3 771 aa16.25■□□□□ 0.19
TRIM3-215ENST00000639856 TOPORSQ9NS56 1045 aaPredicted RBP16.25■□□□□ 0.19
TRIM3-215ENST00000639856 NOC2LQ9Y3T9 749 aaKnown RBP16.25■□□□□ 0.19
TRIM3-215ENST00000639856 RBM47A0AV96 593 aaKnown RBP16.24■□□□□ 0.19
TRIM3-215ENST00000639856 ZSCAN5CA6NGD5 496 aaPredicted RBP16.24■□□□□ 0.19
TRIM3-215ENST00000639856 ERICH4A6NGS2 130 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 K7ERI5 159 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 RAD51CO43502 376 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 LGALS2P05162 132 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 GJB1P08034 283 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 ZNF286BP0CG31 522 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 CARSP49589 748 aaKnown RBP16.24■□□□□ 0.19
TRIM3-215ENST00000639856 PAK2Q13177 524 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 LAMC2Q13753 1193 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 RGMBQ6NW40 437 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 FAM71AQ8IYT1 594 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 ZBTB45Q96K62 511 aaPredicted RBP16.24■□□□□ 0.19
TRIM3-215ENST00000639856 MFSD14AQ96MC6 490 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 KREMEN1Q96MU8 473 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 FAM213AQ9BRX8 229 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 ISCUQ9H1K1 167 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.24■□□□□ 0.19
TRIM3-215ENST00000639856 TTLL13PA6NNM8 815 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 ADCY6O43306 1168 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 SMPD1P17405 629 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 GPC3P51654 580 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 MFAP3P55082 362 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 HADHBP55084 474 aaKnown RBP16.24■□□□□ 0.19
TRIM3-215ENST00000639856 USP37Q86T82 979 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 RHOT2Q8IXI1 618 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 KLHL7Q8IXQ5 586 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 GPD1LQ8N335 351 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 PPM1KQ8N3J5 372 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 EPS8L1Q8TE68 723 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 RIN2Q8WYP3 895 aaPredicted RBP16.24■□□□□ 0.19
TRIM3-215ENST00000639856 SEMA4DQ92854 862 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 ZNF668Q96K58 619 aaPredicted RBP16.24■□□□□ 0.19
TRIM3-215ENST00000639856 TINF2Q9BSI4 451 aa16.24■□□□□ 0.19
TRIM3-215ENST00000639856 TARS2Q9BW92 718 aaKnown RBP16.24■□□□□ 0.19
TRIM3-215ENST00000639856 ZNF236Q9UL36 1845 aa16.23■□□□□ 0.19
TRIM3-215ENST00000639856 IGKV6-21A0A0C4DH24 114 aa16.23■□□□□ 0.19
TRIM3-215ENST00000639856 MANSC4A6NHS7 340 aaPredicted RBP16.23■□□□□ 0.19
TRIM3-215ENST00000639856 SLC15A5A6NIM6 579 aa16.23■□□□□ 0.19
TRIM3-215ENST00000639856 CCDC188H7C350 402 aa16.23■□□□□ 0.19
TRIM3-215ENST00000639856 ADCY3O60266 1144 aa16.23■□□□□ 0.19
TRIM3-215ENST00000639856 GARTP22102 1010 aa16.23■□□□□ 0.19
TRIM3-215ENST00000639856 GTF2H1P32780 548 aa16.23■□□□□ 0.19
TRIM3-215ENST00000639856 ABCD1P33897 745 aa16.23■□□□□ 0.19
TRIM3-215ENST00000639856 USP8P40818 1118 aa16.23■□□□□ 0.19
TRIM3-215ENST00000639856 CYP24A1Q07973 514 aa16.23■□□□□ 0.19
TRIM3-215ENST00000639856 LAMTOR4Q0VGL1 99 aa16.23■□□□□ 0.19
TRIM3-215ENST00000639856 RPUSD2Q8IZ73 545 aaKnown RBP16.23■□□□□ 0.19
TRIM3-215ENST00000639856 PPTC7Q8NI37 304 aa16.23■□□□□ 0.19
TRIM3-215ENST00000639856 SHC3Q92529 594 aa16.23■□□□□ 0.19
TRIM3-215ENST00000639856 FAM204AQ9H8W3 233 aa16.23■□□□□ 0.19
TRIM3-215ENST00000639856 ANKFY1Q9P2R3 1169 aa16.23■□□□□ 0.19
TRIM3-215ENST00000639856 KCNG1Q9UIX4 513 aa16.23■□□□□ 0.19
TRIM3-215ENST00000639856 NFU1Q9UMS0 254 aa16.23■□□□□ 0.19
TRIM3-215ENST00000639856 ESYT3A0FGR9 886 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 SGPL1O95470 568 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 FTLP02792 175 aaPredicted RBP16.22■□□□□ 0.19
TRIM3-215ENST00000639856 SRGAP2CP0DJJ0 459 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 LMAN1P49257 510 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 SLC26A2P50443 739 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 IGBP1P78318 339 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 ENPEPQ07075 957 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 TCEAL1Q15170 157 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 IER5Q5VY09 327 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 FBXL13Q8NEE6 735 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 CASKIN2Q8WXE0 1202 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 IFT81Q8WYA0 676 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 KCNN1Q92952 543 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 PLEKHA4Q9H4M7 779 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 ERAP1Q9NZ08 941 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 NOCTQ9UK39 431 aaKnown RBP16.22■□□□□ 0.19
TRIM3-215ENST00000639856 TTC7AQ9ULT0 858 aaPredicted RBP16.22■□□□□ 0.19
TRIM3-215ENST00000639856 COG5Q9UP83 839 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 KRIT1O00522 736 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 HBP1O60381 514 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 RTN2O75298 545 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 CLSTN1O94985 981 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 DLATP10515 647 aaKnown RBP16.22■□□□□ 0.19
TRIM3-215ENST00000639856 ACOT2P49753 483 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms