RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 TFR2Q9UP52 801 aa19.52■□□□□ 0.72
SCARB2-213ENST00000638680 NEU2Q9Y3R4 380 aa19.52■□□□□ 0.72
SCARB2-213ENST00000638680 CDC42BPGQ6DT37 1551 aa19.52■□□□□ 0.71
SCARB2-213ENST00000638680 ADGRL3Q9HAR2 1447 aa19.52■□□□□ 0.71
SCARB2-213ENST00000638680 CCT8L1PA6NM43 557 aa19.52■□□□□ 0.71
SCARB2-213ENST00000638680 AGO2Q9UKV8 859 aaKnown RBP19.52■□□□□ 0.71
SCARB2-213ENST00000638680 TMEM120BA0PK00 339 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 ATP9BO43861 1147 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 BAG6P46379 1132 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 DNAL1Q4LDG9 190 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 TOPORSQ9NS56 1045 aaPredicted RBP19.51■□□□□ 0.71
SCARB2-213ENST00000638680 RGL1Q9NZL6 768 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 ZFATQ9P243 1243 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 NRKQ7Z2Y5 1582 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 ZNF710Q8N1W2 664 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 MMGT1Q8N4V1 131 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 BEST2Q8NFU1 509 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 ZC4H2Q9NQZ6 224 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 FHOD1Q9Y613 1164 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 ESRRBO95718 433 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 HNRNPH1P31943 449 aaKnown RBP19.51■□□□□ 0.71
SCARB2-213ENST00000638680 USP49Q70CQ1 688 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 SGSM3Q96HU1 749 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 UNC45AQ9H3U1 944 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 TDRD3Q9H7E2 651 aaKnown RBP19.51■□□□□ 0.71
SCARB2-213ENST00000638680 NEMP1O14524 444 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 NEK2P51955 445 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 SNRNP48Q6IEG0 339 aaKnown RBP19.51■□□□□ 0.71
SCARB2-213ENST00000638680 SLC30A9Q6PML9 568 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 GIMAP8Q8ND71 665 aaPredicted RBP19.51■□□□□ 0.71
SCARB2-213ENST00000638680 DNAJC9Q8WXX5 260 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 MRPL4Q9BYD3 311 aaKnown RBP19.51■□□□□ 0.71
SCARB2-213ENST00000638680 ISCUQ9H1K1 167 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 DONSONQ9NYP3 566 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 PLA2R1Q13018 1463 aa19.51■□□□□ 0.71
SCARB2-213ENST00000638680 FAM107AO95990 144 aa19.5■□□□□ 0.71
SCARB2-213ENST00000638680 LBRQ14739 615 aaKnown RBP19.5■□□□□ 0.71
SCARB2-213ENST00000638680 USP38Q8NB14 1042 aa19.5■□□□□ 0.71
SCARB2-213ENST00000638680 TSR3Q9UJK0 312 aaKnown RBP19.5■□□□□ 0.71
SCARB2-213ENST00000638680 E5RI56 91 aa19.5■□□□□ 0.71
SCARB2-213ENST00000638680 F5H6K3 240 aa19.5■□□□□ 0.71
SCARB2-213ENST00000638680 F8W8V4 182 aa19.5■□□□□ 0.71
SCARB2-213ENST00000638680 KLRC3Q07444 240 aa19.5■□□□□ 0.71
SCARB2-213ENST00000638680 THEM5Q8N1Q8 247 aa19.5■□□□□ 0.71
SCARB2-213ENST00000638680 EML4Q9HC35 981 aaKnown RBP19.5■□□□□ 0.71
SCARB2-213ENST00000638680 UVRAGQ9P2Y5 699 aa19.5■□□□□ 0.71
SCARB2-213ENST00000638680 CSPG5O95196 566 aa19.5■□□□□ 0.71
SCARB2-213ENST00000638680 ZFXP17010 805 aaPredicted RBP19.5■□□□□ 0.71
SCARB2-213ENST00000638680 IRX1P78414 480 aaPredicted RBP19.5■□□□□ 0.71
SCARB2-213ENST00000638680 NSUN6Q8TEA1 469 aaKnown RBP19.5■□□□□ 0.71
SCARB2-213ENST00000638680 TMEM117Q9H0C3 514 aa19.5■□□□□ 0.71
SCARB2-213ENST00000638680 A0A1W2PQJ5 194 aa19.5■□□□□ 0.71
SCARB2-213ENST00000638680 IGF2BP3O00425 579 aaKnown RBP eCLIP19.5■□□□□ 0.71
SCARB2-213ENST00000638680 FMO5P49326 533 aa19.5■□□□□ 0.71
SCARB2-213ENST00000638680 SESN2P58004 480 aaPredicted RBP19.5■□□□□ 0.71
SCARB2-213ENST00000638680 PNKPQ96T60 521 aa19.5■□□□□ 0.71
SCARB2-213ENST00000638680 HSPBP1Q9NZL4 362 aa19.5■□□□□ 0.71
SCARB2-213ENST00000638680 STX3Q13277 289 aa19.5■□□□□ 0.71
SCARB2-213ENST00000638680 EP400NLQ6ZTU2 488 aa19.5■□□□□ 0.71
SCARB2-213ENST00000638680 PID1Q7Z2X4 250 aa19.5■□□□□ 0.71
SCARB2-213ENST00000638680 PBXIP1Q96AQ6 731 aa19.5■□□□□ 0.71
SCARB2-213ENST00000638680 ISCA1Q9BUE6 129 aa19.5■□□□□ 0.71
SCARB2-213ENST00000638680 LZTS1Q9Y250 596 aa19.5■□□□□ 0.71
SCARB2-213ENST00000638680 MYMKA6NI61 221 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 KDM1AO60341 852 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 NFX1Q12986 1120 aaKnown RBP19.49■□□□□ 0.71
SCARB2-213ENST00000638680 LRRC31Q6UY01 552 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 HNRNPLLQ8WVV9 542 aaKnown RBP19.49■□□□□ 0.71
SCARB2-213ENST00000638680 TUFT1Q9NNX1 390 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 XPO7Q9UIA9 1087 aaKnown RBP19.49■□□□□ 0.71
SCARB2-213ENST00000638680 ZBTB12Q9Y330 459 aaPredicted RBP19.49■□□□□ 0.71
SCARB2-213ENST00000638680 KRT4P19013 534 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 PRAMEP78395 509 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 MXD4Q14582 209 aaPredicted RBP19.49■□□□□ 0.71
SCARB2-213ENST00000638680 EPHA7Q15375 998 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 TEX2Q8IWB9 1127 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 REXO1L1PQ8IX06 675 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 PGBD4Q96DM1 585 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 MTBPQ96DY7 904 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 THAP11Q96EK4 314 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 TMA16Q96EY4 203 aaKnown RBP19.49■□□□□ 0.71
SCARB2-213ENST00000638680 FAM118BQ9BPY3 351 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 THTPAQ9BU02 230 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 ASPSCR1Q9BZE9 553 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 ADNPQ9H2P0 1102 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 PDS5AQ29RF7 1337 aaKnown RBP19.49■□□□□ 0.71
SCARB2-213ENST00000638680 ARHGEF9O43307 516 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 SCN4BQ8IWT1 228 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 OR6P1Q8NGX9 317 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 REEP2Q9BRK0 252 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 ARHGAP26Q9UNA1 814 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 PLA2G4AP47712 749 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 NEDD1Q8NHV4 660 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 CLMNQ96JQ2 1002 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 C2orf40Q9H1Z8 148 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 CD248Q9HCU0 757 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 ZNF229Q9UJW7 825 aa19.49■□□□□ 0.71
SCARB2-213ENST00000638680 MAP3K4Q9Y6R4 1608 aa19.48■□□□□ 0.71
SCARB2-213ENST00000638680 AKR1B1P15121 316 aa19.48■□□□□ 0.71
SCARB2-213ENST00000638680 PRPF38AQ8NAV1 312 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms