RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 TULP1O00294 542 aaPredicted RBP12.74□□□□□ -0.37
CLN6-223ENST00000637823 EPHB6O15197 1021 aa12.74□□□□□ -0.37
CLN6-223ENST00000637823 GPR182O15218 404 aa12.74□□□□□ -0.37
CLN6-223ENST00000637823 B4GALT4O60513 344 aa12.74□□□□□ -0.37
CLN6-223ENST00000637823 RPS6KA5O75582 802 aa12.74□□□□□ -0.37
CLN6-223ENST00000637823 NPTXRO95502 500 aa12.74□□□□□ -0.37
CLN6-223ENST00000637823 TFRCP02786 760 aaKnown RBP12.74□□□□□ -0.37
CLN6-223ENST00000637823 C4BPAP04003 597 aaKnown RBP12.74□□□□□ -0.37
CLN6-223ENST00000637823 HSPA1AP0DMV8 641 aaKnown RBP12.74□□□□□ -0.37
CLN6-223ENST00000637823 HSPA1BP0DMV9 641 aaKnown RBP12.74□□□□□ -0.37
CLN6-223ENST00000637823 ACTN1P12814 892 aa12.74□□□□□ -0.37
CLN6-223ENST00000637823 CAPN2P17655 700 aa12.74□□□□□ -0.37
CLN6-223ENST00000637823 FECHP22830 423 aa12.74□□□□□ -0.37
CLN6-223ENST00000637823 GRM5P41594 1212 aa12.74□□□□□ -0.37
CLN6-223ENST00000637823 POLR2FP61218 127 aaKnown RBP12.74□□□□□ -0.37
CLN6-223ENST00000637823 OSTNP61366 133 aa12.74□□□□□ -0.37
CLN6-223ENST00000637823 ENOX2Q16206 610 aaKnown RBP12.74□□□□□ -0.37
CLN6-223ENST00000637823 ZACNQ401N2 412 aa12.74□□□□□ -0.37
CLN6-223ENST00000637823 SV2AQ7L0J3 742 aa12.74□□□□□ -0.37
CLN6-223ENST00000637823 FAM228AQ86W67 206 aa12.74□□□□□ -0.37
CLN6-223ENST00000637823 TMTC1Q8IUR5 882 aa12.74□□□□□ -0.37
CLN6-223ENST00000637823 WDR49Q8IV35 697 aa12.74□□□□□ -0.37
CLN6-223ENST00000637823 FBXL13Q8NEE6 735 aa12.74□□□□□ -0.37
CLN6-223ENST00000637823 SYN2Q92777 582 aaPredicted RBP12.74□□□□□ -0.37
CLN6-223ENST00000637823 ACAP3Q96P50 834 aa12.74□□□□□ -0.37
CLN6-223ENST00000637823 ASB7Q9H672 318 aa12.74□□□□□ -0.37
CLN6-223ENST00000637823 CHST12Q9NRB3 414 aa12.74□□□□□ -0.37
CLN6-223ENST00000637823 ABHD10Q9NUJ1 306 aa12.74□□□□□ -0.37
CLN6-223ENST00000637823 ZNHIT6Q9NWK9 470 aaKnown RBP12.74□□□□□ -0.37
CLN6-223ENST00000637823 MYO6Q9UM54 1294 aa12.74□□□□□ -0.37
CLN6-223ENST00000637823 CTSHP09668 335 aa12.73□□□□□ -0.37
CLN6-223ENST00000637823 UCHL3P15374 230 aa12.73□□□□□ -0.37
CLN6-223ENST00000637823 RFX1P22670 979 aa12.73□□□□□ -0.37
CLN6-223ENST00000637823 HNRNPH3P31942 346 aaKnown RBP12.73□□□□□ -0.37
CLN6-223ENST00000637823 WNT7BP56706 349 aa12.73□□□□□ -0.37
CLN6-223ENST00000637823 CDK17Q00537 523 aa12.73□□□□□ -0.37
CLN6-223ENST00000637823 DUOXA2Q1HG44 320 aa12.73□□□□□ -0.37
CLN6-223ENST00000637823 PDXDC1Q6P996 788 aa12.73□□□□□ -0.37
CLN6-223ENST00000637823 CYP26C1Q6V0L0 522 aa12.73□□□□□ -0.37
CLN6-223ENST00000637823 RRAGAQ7L523 313 aa12.73□□□□□ -0.37
CLN6-223ENST00000637823 TMEM139Q8IV31 216 aa12.73□□□□□ -0.37
CLN6-223ENST00000637823 CD302Q8IX05 232 aa12.73□□□□□ -0.37
CLN6-223ENST00000637823 USP38Q8NB14 1042 aa12.73□□□□□ -0.37
CLN6-223ENST00000637823 BAP1Q92560 729 aa12.73□□□□□ -0.37
CLN6-223ENST00000637823 FAM212AQ96EL1 285 aa12.73□□□□□ -0.37
CLN6-223ENST00000637823 CCDC94Q9BW85 323 aaPredicted RBP12.73□□□□□ -0.37
CLN6-223ENST00000637823 PLEKHA5Q9HAU0 1116 aa12.73□□□□□ -0.37
CLN6-223ENST00000637823 NLRC4Q9NPP4 1024 aa12.73□□□□□ -0.37
CLN6-223ENST00000637823 TOPORSQ9NS56 1045 aaPredicted RBP12.73□□□□□ -0.37
CLN6-223ENST00000637823 RAB20Q9NX57 234 aa12.73□□□□□ -0.37
CLN6-223ENST00000637823 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.73□□□□□ -0.37
CLN6-223ENST00000637823 ST3GAL5Q9UNP4 418 aa12.73□□□□□ -0.37
CLN6-223ENST00000637823 PLAGL2Q9UPG8 496 aa12.73□□□□□ -0.37
CLN6-223ENST00000637823 PIN4Q9Y237 131 aaKnown RBP12.73□□□□□ -0.37
CLN6-223ENST00000637823 DNAH12Q6ZR08 3092 aa12.73□□□□□ -0.37
CLN6-223ENST00000637823 CENPFP49454 3210 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 MROH7Q68CQ1 1323 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 LACTBL1A8MY62 500 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 ESPNB1AK53 854 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 ARHGAP6O43182 974 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 ZC3H11AO75152 810 aaKnown RBP eCLIP12.72□□□□□ -0.37
CLN6-223ENST00000637823 CXCL8P10145 99 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 CKBP12277 381 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 MSNP26038 577 aaKnown RBP12.72□□□□□ -0.37
CLN6-223ENST00000637823 KCNJ6P48051 423 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 APBA1Q02410 837 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 MEA1Q16626 185 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 SLC10A6Q3KNW5 377 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 FBXO47Q5MNV8 452 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 ZNF618Q5T7W0 954 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 SFMBT2Q5VUG0 894 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 TMEM192Q8IY95 271 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 CEP120Q8N960 986 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 ANKLE1Q8NAG6 615 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 CAGE1Q8TC20 777 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 U2AF1L4Q8WU68 220 aaKnown RBP12.72□□□□□ -0.37
CLN6-223ENST00000637823 SEMA4DQ92854 862 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 EIF2AQ9BY44 585 aaKnown RBP12.72□□□□□ -0.37
CLN6-223ENST00000637823 STK33Q9BYT3 514 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 TRIM6Q9C030 488 aaPredicted RBP12.72□□□□□ -0.37
CLN6-223ENST00000637823 ERVK-5Q9HDB9 667 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 APEX2Q9UBZ4 518 aa12.72□□□□□ -0.37
CLN6-223ENST00000637823 PTPRJQ12913 1337 aa12.71□□□□□ -0.37
CLN6-223ENST00000637823 LRRC53A6NM62 1247 aa12.71□□□□□ -0.37
CLN6-223ENST00000637823 TLR3O15455 904 aaKnown RBP12.71□□□□□ -0.37
CLN6-223ENST00000637823 PHACTR2O75167 634 aa12.71□□□□□ -0.37
CLN6-223ENST00000637823 CD4P01730 458 aa12.71□□□□□ -0.37
CLN6-223ENST00000637823 HLA-DRAP01903 254 aa12.71□□□□□ -0.37
CLN6-223ENST00000637823 TNNC2P02585 160 aa12.71□□□□□ -0.37
CLN6-223ENST00000637823 MNX1P50219 401 aaPredicted RBP12.71□□□□□ -0.37
CLN6-223ENST00000637823 YARSP54577 528 aaKnown RBP12.71□□□□□ -0.37
CLN6-223ENST00000637823 NFX1Q12986 1120 aaKnown RBP12.71□□□□□ -0.37
CLN6-223ENST00000637823 BIRC3Q13489 604 aa12.71□□□□□ -0.37
CLN6-223ENST00000637823 BFSP2Q13515 415 aa12.71□□□□□ -0.37
CLN6-223ENST00000637823 WDR44Q5JSH3 913 aa12.71□□□□□ -0.37
CLN6-223ENST00000637823 UBXN11Q5T124 520 aa12.71□□□□□ -0.37
CLN6-223ENST00000637823 TDRD10Q5VZ19 366 aaKnown RBP12.71□□□□□ -0.37
CLN6-223ENST00000637823 LMBRD2Q68DH5 695 aaPredicted RBP12.71□□□□□ -0.37
CLN6-223ENST00000637823 IQCEQ6IPM2 695 aa12.71□□□□□ -0.37
CLN6-223ENST00000637823 PHLDB3Q6NSJ2 640 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms