RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 NAA15Q9BXJ9 866 aaKnown RBP16.59■□□□□ 0.25
CTSD-211ENST00000637387 EDEM3Q9BZQ6 932 aa16.59■□□□□ 0.25
CTSD-211ENST00000637387 TMEM8AQ9HCN3 771 aa16.59■□□□□ 0.25
CTSD-211ENST00000637387 PDE11AQ9HCR9 933 aa16.59■□□□□ 0.25
CTSD-211ENST00000637387 FBXL5Q9UKA1 691 aa16.59■□□□□ 0.25
CTSD-211ENST00000637387 GINS2Q9Y248 185 aa16.59■□□□□ 0.25
CTSD-211ENST00000637387 COQ4Q9Y3A0 265 aa16.59■□□□□ 0.25
CTSD-211ENST00000637387 A0A1B0GUA9 196 aa16.58■□□□□ 0.24
CTSD-211ENST00000637387 A0A1W2PQ45 241 aaPredicted RBP16.58■□□□□ 0.24
CTSD-211ENST00000637387 A0A1W2PQY0 241 aa16.58■□□□□ 0.24
CTSD-211ENST00000637387 LRRC53A6NM62 1247 aa16.58■□□□□ 0.24
CTSD-211ENST00000637387 N4BP1O75113 896 aaKnown RBP16.58■□□□□ 0.24
CTSD-211ENST00000637387 MCF2P10911 925 aa16.58■□□□□ 0.24
CTSD-211ENST00000637387 UCHL3P15374 230 aa16.58■□□□□ 0.24
CTSD-211ENST00000637387 HNRNPH3P31942 346 aaKnown RBP16.58■□□□□ 0.24
CTSD-211ENST00000637387 ATN1P54259 1190 aaPredicted RBP16.58■□□□□ 0.24
CTSD-211ENST00000637387 POLR2FP61218 127 aaKnown RBP16.58■□□□□ 0.24
CTSD-211ENST00000637387 MGAT3Q09327 533 aa16.58■□□□□ 0.24
CTSD-211ENST00000637387 C1orf53Q5VUE5 145 aa16.58■□□□□ 0.24
CTSD-211ENST00000637387 LMBRD2Q68DH5 695 aaPredicted RBP16.58■□□□□ 0.24
CTSD-211ENST00000637387 PDXDC1Q6P996 788 aa16.58■□□□□ 0.24
CTSD-211ENST00000637387 GJB7Q6PEY0 223 aa16.58■□□□□ 0.24
CTSD-211ENST00000637387 SLC43A3Q8NBI5 491 aa16.58■□□□□ 0.24
CTSD-211ENST00000637387 OR8K1Q8NGG5 319 aa16.58■□□□□ 0.24
CTSD-211ENST00000637387 CGRRF1Q99675 332 aa16.58■□□□□ 0.24
CTSD-211ENST00000637387 INTS2Q9H0H0 1204 aaKnown RBP16.58■□□□□ 0.24
CTSD-211ENST00000637387 NLRC4Q9NPP4 1024 aa16.58■□□□□ 0.24
CTSD-211ENST00000637387 PHF24Q9UPV7 400 aa16.58■□□□□ 0.24
CTSD-211ENST00000637387 SOWAHDA6NJG2 315 aa16.57■□□□□ 0.24
CTSD-211ENST00000637387 ERLIN2O94905 339 aa16.57■□□□□ 0.24
CTSD-211ENST00000637387 DLATP10515 647 aaKnown RBP16.57■□□□□ 0.24
CTSD-211ENST00000637387 CRYBB1P53674 252 aaPredicted RBP16.57■□□□□ 0.24
CTSD-211ENST00000637387 MRPS6P82932 125 aaKnown RBP16.57■□□□□ 0.24
CTSD-211ENST00000637387 MTF1Q14872 753 aa16.57■□□□□ 0.24
CTSD-211ENST00000637387 ENOX2Q16206 610 aaKnown RBP16.57■□□□□ 0.24
CTSD-211ENST00000637387 TRIM71Q2Q1W2 868 aaKnown RBP16.57■□□□□ 0.24
CTSD-211ENST00000637387 KRT39Q6A163 491 aa16.57■□□□□ 0.24
CTSD-211ENST00000637387 RAD9BQ6WBX8 426 aa16.57■□□□□ 0.24
CTSD-211ENST00000637387 SV2AQ7L0J3 742 aa16.57■□□□□ 0.24
CTSD-211ENST00000637387 THNSL1Q8IYQ7 743 aa16.57■□□□□ 0.24
CTSD-211ENST00000637387 SEMA4DQ92854 862 aa16.57■□□□□ 0.24
CTSD-211ENST00000637387 TCHPQ9BT92 498 aa16.57■□□□□ 0.24
CTSD-211ENST00000637387 PLAGL2Q9UPG8 496 aa16.57■□□□□ 0.24
CTSD-211ENST00000637387 CDY2AQ9Y6F7 541 aa16.57■□□□□ 0.24
CTSD-211ENST00000637387 ARHGAP6O43182 974 aa16.56■□□□□ 0.24
CTSD-211ENST00000637387 ZNF500O60304 480 aaPredicted RBP16.56■□□□□ 0.24
CTSD-211ENST00000637387 MSNP26038 577 aaKnown RBP16.56■□□□□ 0.24
CTSD-211ENST00000637387 GTF2H1P32780 548 aa16.56■□□□□ 0.24
CTSD-211ENST00000637387 JAM2P57087 298 aa16.56■□□□□ 0.24
CTSD-211ENST00000637387 PTPN11Q06124 597 aaPredicted RBP16.56■□□□□ 0.24
CTSD-211ENST00000637387 PCBP1Q15365 356 aaKnown RBP eCLIP16.56■□□□□ 0.241e-18■■■■□ 19.8
CTSD-211ENST00000637387 ZACNQ401N2 412 aa16.56■□□□□ 0.24
CTSD-211ENST00000637387 IQCEQ6IPM2 695 aa16.56■□□□□ 0.24
CTSD-211ENST00000637387 ZNF710Q8N1W2 664 aa16.56■□□□□ 0.24
CTSD-211ENST00000637387 EHBP1Q8NDI1 1231 aa16.56■□□□□ 0.24
CTSD-211ENST00000637387 TAS1R2Q8TE23 839 aa16.56■□□□□ 0.24
CTSD-211ENST00000637387 CHP1Q99653 195 aa16.56■□□□□ 0.24
CTSD-211ENST00000637387 CELF4Q9BZC1 486 aaKnown RBP16.56■□□□□ 0.24
CTSD-211ENST00000637387 TRMT13Q9NUP7 481 aaKnown RBP16.56■□□□□ 0.24
CTSD-211ENST00000637387 TRPV2Q9Y5S1 764 aa16.56■□□□□ 0.24
CTSD-211ENST00000637387 C4BPAP04003 597 aaKnown RBP16.55■□□□□ 0.24
CTSD-211ENST00000637387 CXCL8P10145 99 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 HSP90AA2PQ14568 343 aaPredicted RBP16.55■□□□□ 0.24
CTSD-211ENST00000637387 PTGISQ16647 500 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 TDRD10Q5VZ19 366 aaKnown RBP16.55■□□□□ 0.24
CTSD-211ENST00000637387 SCARA3Q6AZY7 606 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 PHLDB3Q6NSJ2 640 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 CATSPER4Q7RTX7 472 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 FAM228AQ86W67 206 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 EFCAB13Q8IY85 973 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 OR5B17Q8NGF7 314 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 GLT1D1Q96MS3 346 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 OSBPL7Q9BZF2 842 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 GPR88Q9GZN0 384 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 RRAGDQ9NQL2 400 aaPredicted RBP16.55■□□□□ 0.24
CTSD-211ENST00000637387 APEX2Q9UBZ4 518 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 USP27XA6NNY8 438 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 SOX1O00570 391 aaPredicted RBP16.55■□□□□ 0.24
CTSD-211ENST00000637387 VNN1O95497 513 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 CHRNA1P02708 482 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 OSTNP61366 133 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 TMEM132AQ24JP5 1023 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 HGSNATQ68CP4 663 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 RRAGAQ7L523 313 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 CACNA2D4Q7Z3S7 1137 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 USP37Q86T82 979 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 ARHGEF19Q8IW93 802 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 FNBP1Q96RU3 617 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 KCND1Q9NSA2 647 aa16.55■□□□□ 0.24
CTSD-211ENST00000637387 NOC2LQ9Y3T9 749 aaKnown RBP16.55■□□□□ 0.24
CTSD-211ENST00000637387 PLEKP08567 350 aaPredicted RBP16.54■□□□□ 0.24
CTSD-211ENST00000637387 CTSHP09668 335 aa16.54■□□□□ 0.24
CTSD-211ENST00000637387 STAG3L1P0CL83 205 aa16.54■□□□□ 0.24
CTSD-211ENST00000637387 CDK17Q00537 523 aa16.54■□□□□ 0.24
CTSD-211ENST00000637387 PTK7Q13308 1070 aa16.54■□□□□ 0.24
CTSD-211ENST00000637387 UBXN11Q5T124 520 aa16.54■□□□□ 0.24
CTSD-211ENST00000637387 SLC27A1Q6PCB7 646 aa16.54■□□□□ 0.24
CTSD-211ENST00000637387 TOGARAM2Q6ZUX3 1019 aa16.54■□□□□ 0.24
CTSD-211ENST00000637387 GPIHBP1Q8IV16 184 aa16.54■□□□□ 0.24
CTSD-211ENST00000637387 WDR49Q8IV35 697 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms