RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 KIAA1468Q9P260 1216 aa18.75■□□□□ 0.59
CLN6-218ENST00000637223 GOLGA8IPA6NC78 632 aa18.74■□□□□ 0.59
CLN6-218ENST00000637223 GOLGA8JA6NMD2 632 aa18.74■□□□□ 0.59
CLN6-218ENST00000637223 PTGESO14684 152 aa18.74■□□□□ 0.59
CLN6-218ENST00000637223 INPPL1O15357 1258 aa18.74■□□□□ 0.59
CLN6-218ENST00000637223 KIF20AO95235 890 aa18.74■□□□□ 0.59
CLN6-218ENST00000637223 CTNNB1P35222 781 aa18.74■□□□□ 0.59
CLN6-218ENST00000637223 GLRA4Q5JXX5 417 aa18.74■□□□□ 0.59
CLN6-218ENST00000637223 ZNF280BQ86YH2 543 aa18.74■□□□□ 0.59
CLN6-218ENST00000637223 GUF1Q8N442 669 aaKnown RBP18.74■□□□□ 0.59
CLN6-218ENST00000637223 ARNTL2Q8WYA1 636 aa18.74■□□□□ 0.59
CLN6-218ENST00000637223 RSPH1Q8WYR4 309 aa18.74■□□□□ 0.59
CLN6-218ENST00000637223 CLP1Q92989 425 aaKnown RBP18.74■□□□□ 0.59
CLN6-218ENST00000637223 SNX27Q96L92 541 aa18.74■□□□□ 0.59
CLN6-218ENST00000637223 FAM213AQ9BRX8 229 aa18.74■□□□□ 0.59
CLN6-218ENST00000637223 KCTD10Q9H3F6 313 aa18.74■□□□□ 0.59
CLN6-218ENST00000637223 KANSL3Q9P2N6 904 aa18.74■□□□□ 0.59
CLN6-218ENST00000637223 CPSF3Q9UKF6 684 aaKnown RBP18.74■□□□□ 0.59
CLN6-218ENST00000637223 PLAGL2Q9UPG8 496 aa18.74■□□□□ 0.59
CLN6-218ENST00000637223 B4GALT3O60512 393 aa18.73■□□□□ 0.59
CLN6-218ENST00000637223 ZC3H11AO75152 810 aaKnown RBP eCLIP18.73■□□□□ 0.59
CLN6-218ENST00000637223 DDHD2O94830 711 aa18.73■□□□□ 0.59
CLN6-218ENST00000637223 PBX3P40426 434 aa18.73■□□□□ 0.59
CLN6-218ENST00000637223 PRCPP42785 496 aa18.73■□□□□ 0.59
CLN6-218ENST00000637223 CYP2J2P51589 502 aa18.73■□□□□ 0.59
CLN6-218ENST00000637223 ERVK-21P61565 698 aa18.73■□□□□ 0.59
CLN6-218ENST00000637223 MORC3Q14149 939 aa18.73■□□□□ 0.59
CLN6-218ENST00000637223 ENOX2Q16206 610 aaKnown RBP18.73■□□□□ 0.59
CLN6-218ENST00000637223 KYAT1Q16773 422 aa18.73■□□□□ 0.59
CLN6-218ENST00000637223 SLC10A6Q3KNW5 377 aa18.73■□□□□ 0.59
CLN6-218ENST00000637223 FAM212AQ96EL1 285 aa18.73■□□□□ 0.59
CLN6-218ENST00000637223 FAM193BQ96PV7 902 aaPredicted RBP18.73■□□□□ 0.59
CLN6-218ENST00000637223 NRDE2Q9H7Z3 1164 aa18.73■□□□□ 0.59
CLN6-218ENST00000637223 RPF1Q9H9Y2 349 aaKnown RBP18.73■□□□□ 0.59
CLN6-218ENST00000637223 HSPBP1Q9NZL4 362 aa18.73■□□□□ 0.59
CLN6-218ENST00000637223 GBF1Q92538 1859 aa18.73■□□□□ 0.59
CLN6-218ENST00000637223 TCF20Q9UGU0 1960 aaKnown RBP18.72■□□□□ 0.59
CLN6-218ENST00000637223 TULP1O00294 542 aaPredicted RBP18.72■□□□□ 0.59
CLN6-218ENST00000637223 LAG3P18627 525 aa18.72■□□□□ 0.59
CLN6-218ENST00000637223 BMP6P22004 513 aa18.72■□□□□ 0.59
CLN6-218ENST00000637223 BMPR1AP36894 532 aa18.72■□□□□ 0.59
CLN6-218ENST00000637223 SNRPFP62306 86 aaKnown RBP18.72■□□□□ 0.59
CLN6-218ENST00000637223 GRIK3Q13003 919 aa18.72■□□□□ 0.59
CLN6-218ENST00000637223 EPC2Q52LR7 807 aa18.72■□□□□ 0.59
CLN6-218ENST00000637223 CRELD2Q6UXH1 353 aaPredicted RBP18.72■□□□□ 0.59
CLN6-218ENST00000637223 ALKAL1Q6UXT8 129 aa18.72■□□□□ 0.59
CLN6-218ENST00000637223 COLGALT1Q8NBJ5 622 aa18.72■□□□□ 0.59
CLN6-218ENST00000637223 DNAJB4Q9UDY4 337 aa18.72■□□□□ 0.59
CLN6-218ENST00000637223 SMIM28A0A1B0GU29 152 aa18.71■□□□□ 0.59
CLN6-218ENST00000637223 EPOPA6NHQ4 379 aa18.71■□□□□ 0.59
CLN6-218ENST00000637223 LACTBL1A8MY62 500 aa18.71■□□□□ 0.59
CLN6-218ENST00000637223 RFXAPO00287 272 aa18.71■□□□□ 0.59
CLN6-218ENST00000637223 PDXKO00764 312 aa18.71■□□□□ 0.59
CLN6-218ENST00000637223 EXTL3O43909 919 aa18.71■□□□□ 0.59
CLN6-218ENST00000637223 LDHAP00338 332 aaKnown RBP18.71■□□□□ 0.59
CLN6-218ENST00000637223 THP07101 528 aa18.71■□□□□ 0.59
CLN6-218ENST00000637223 BCAR1P56945 870 aa18.71■□□□□ 0.59
CLN6-218ENST00000637223 PPP2R3AQ06190 1150 aa18.71■□□□□ 0.59
CLN6-218ENST00000637223 SPAG1Q07617 926 aa18.71■□□□□ 0.59
CLN6-218ENST00000637223 XKR4Q5GH76 650 aa18.71■□□□□ 0.59
CLN6-218ENST00000637223 GPD1LQ8N335 351 aa18.71■□□□□ 0.59
CLN6-218ENST00000637223 FBXO22Q8NEZ5 403 aa18.71■□□□□ 0.59
CLN6-218ENST00000637223 GOLGA5Q8TBA6 731 aa18.71■□□□□ 0.59
CLN6-218ENST00000637223 ZMAT2Q96NC0 199 aaKnown RBP18.71■□□□□ 0.59
CLN6-218ENST00000637223 ZNF558Q96NG5 402 aa18.71■□□□□ 0.59
CLN6-218ENST00000637223 SAMD11Q96NU1 681 aa18.71■□□□□ 0.59
CLN6-218ENST00000637223 GTPBP4Q9BZE4 634 aaKnown RBP18.71■□□□□ 0.59
CLN6-218ENST00000637223 AAASQ9NRG9 546 aa18.71■□□□□ 0.59
CLN6-218ENST00000637223 CNTN3Q9P232 1028 aa18.71■□□□□ 0.59
CLN6-218ENST00000637223 CGNQ9P2M7 1197 aaKnown RBP18.71■□□□□ 0.59
CLN6-218ENST00000637223 RWDD3Q9Y3V2 267 aa18.71■□□□□ 0.59
CLN6-218ENST00000637223 TTC26A0AVF1 554 aa18.7■□□□□ 0.58
CLN6-218ENST00000637223 NT5C1B-RDH14C9J2C7 533 aa18.7■□□□□ 0.58
CLN6-218ENST00000637223 KIAA0391O15091 583 aaKnown RBP18.7■□□□□ 0.58
CLN6-218ENST00000637223 CALUO43852 315 aaPredicted RBP18.7■□□□□ 0.58
CLN6-218ENST00000637223 BMP1P13497 986 aa18.7■□□□□ 0.58
CLN6-218ENST00000637223 CD44P16070 742 aaKnown RBP18.7■□□□□ 0.58
CLN6-218ENST00000637223 PTMSP20962 102 aa18.7■□□□□ 0.58
CLN6-218ENST00000637223 SLC11A1P49279 550 aa18.7■□□□□ 0.58
CLN6-218ENST00000637223 COBLL1Q53SF7 1204 aa18.7■□□□□ 0.58
CLN6-218ENST00000637223 KCNT2Q6UVM3 1135 aa18.7■□□□□ 0.58
CLN6-218ENST00000637223 CBWD2Q8IUF1 395 aa18.7■□□□□ 0.58
CLN6-218ENST00000637223 C12orf56Q8IXR9 622 aa18.7■□□□□ 0.58
CLN6-218ENST00000637223 COLGALT2Q8IYK4 626 aa18.7■□□□□ 0.58
CLN6-218ENST00000637223 ADSSL1Q8N142 457 aa18.7■□□□□ 0.58
CLN6-218ENST00000637223 GDPD5Q8WTR4 605 aa18.7■□□□□ 0.58
CLN6-218ENST00000637223 PPP1R10Q96QC0 940 aaKnown RBP18.7■□□□□ 0.58
CLN6-218ENST00000637223 PLEKHA5Q9HAU0 1116 aa18.7■□□□□ 0.58
CLN6-218ENST00000637223 RBAKQ9NYW8 714 aaPredicted RBP18.7■□□□□ 0.58
CLN6-218ENST00000637223 CACNG4Q9UBN1 327 aa18.7■□□□□ 0.58
CLN6-218ENST00000637223 PCDHB12Q9Y5F1 795 aa18.7■□□□□ 0.58
CLN6-218ENST00000637223 CASTOR2A6NHX0 329 aa18.69■□□□□ 0.58
CLN6-218ENST00000637223 NR3C1P04150 777 aa18.69■□□□□ 0.58
CLN6-218ENST00000637223 GALTP07902 379 aa18.69■□□□□ 0.58
CLN6-218ENST00000637223 KCNE1P15382 129 aa18.69■□□□□ 0.58
CLN6-218ENST00000637223 OR1G1P47890 313 aa18.69■□□□□ 0.58
CLN6-218ENST00000637223 DSC1Q08554 894 aa18.69■□□□□ 0.58
CLN6-218ENST00000637223 STIM1Q13586 685 aa18.69■□□□□ 0.58
CLN6-218ENST00000637223 NAB2Q15742 525 aa18.69■□□□□ 0.58
CLN6-218ENST00000637223 KLHL10Q6JEL2 608 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms