RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 NOD1Q9Y239 953 aa22.83■■□□□ 1.24
CLN8-213ENST00000637156 A0A0U1RQG5 324 aaPredicted RBP22.82■■□□□ 1.24
CLN8-213ENST00000637156 LRRC53A6NM62 1247 aa22.82■■□□□ 1.24
CLN8-213ENST00000637156 B4GALT4O60513 344 aa22.82■■□□□ 1.24
CLN8-213ENST00000637156 RPLP2P05387 115 aaKnown RBP22.82■■□□□ 1.24
CLN8-213ENST00000637156 AXLP30530 894 aa22.82■■□□□ 1.24
CLN8-213ENST00000637156 NOTUMQ6P988 496 aa22.82■■□□□ 1.24
CLN8-213ENST00000637156 SLC27A1Q6PCB7 646 aa22.82■■□□□ 1.24
CLN8-213ENST00000637156 OR5B17Q8NGF7 314 aa22.82■■□□□ 1.24
CLN8-213ENST00000637156 TAS1R2Q8TE23 839 aa22.82■■□□□ 1.24
CLN8-213ENST00000637156 CHP1Q99653 195 aa22.82■■□□□ 1.24
CLN8-213ENST00000637156 ADPGKQ9BRR6 497 aa22.82■■□□□ 1.24
CLN8-213ENST00000637156 NAA15Q9BXJ9 866 aaKnown RBP22.82■■□□□ 1.24
CLN8-213ENST00000637156 EIF2AQ9BY44 585 aaKnown RBP22.82■■□□□ 1.24
CLN8-213ENST00000637156 AJAP1Q9UKB5 411 aaPredicted RBP22.82■■□□□ 1.24
CLN8-213ENST00000637156 FHOD1Q9Y613 1164 aa22.82■■□□□ 1.24
CLN8-213ENST00000637156 CLTAP09496 248 aa22.81■■□□□ 1.24
CLN8-213ENST00000637156 CXCL8P10145 99 aa22.81■■□□□ 1.24
CLN8-213ENST00000637156 HNRNPH3P31942 346 aaKnown RBP22.81■■□□□ 1.24
CLN8-213ENST00000637156 CDK7P50613 346 aa22.81■■□□□ 1.24
CLN8-213ENST00000637156 ZACNQ401N2 412 aa22.81■■□□□ 1.24
CLN8-213ENST00000637156 E4F1Q66K89 784 aaPredicted RBP22.81■■□□□ 1.24
CLN8-213ENST00000637156 FBXO46Q6PJ61 603 aaPredicted RBP22.81■■□□□ 1.24
CLN8-213ENST00000637156 CGRRF1Q99675 332 aa22.81■■□□□ 1.24
CLN8-213ENST00000637156 RPF1Q9H9Y2 349 aaKnown RBP22.81■■□□□ 1.24
CLN8-213ENST00000637156 RAB20Q9NX57 234 aa22.81■■□□□ 1.24
CLN8-213ENST00000637156 MEA1Q16626 185 aa22.81■■□□□ 1.24
CLN8-213ENST00000637156 SLC10A6Q3KNW5 377 aa22.81■■□□□ 1.24
CLN8-213ENST00000637156 TDRD10Q5VZ19 366 aaKnown RBP22.81■■□□□ 1.24
CLN8-213ENST00000637156 SCARA3Q6AZY7 606 aa22.81■■□□□ 1.24
CLN8-213ENST00000637156 C17orf53Q8N3J3 647 aaPredicted RBP22.81■■□□□ 1.24
CLN8-213ENST00000637156 FBXL13Q8NEE6 735 aa22.81■■□□□ 1.24
CLN8-213ENST00000637156 ZNF333Q96JL9 665 aa22.81■■□□□ 1.24
CLN8-213ENST00000637156 PIN4Q9Y237 131 aaKnown RBP22.81■■□□□ 1.24
CLN8-213ENST00000637156 NPTXRO95502 500 aa22.8■■□□□ 1.24
CLN8-213ENST00000637156 POU5F1Q01860 360 aaKnown RBP22.8■■□□□ 1.24
CLN8-213ENST00000637156 IQCEQ6IPM2 695 aa22.8■■□□□ 1.24
CLN8-213ENST00000637156 PDXDC1Q6P996 788 aa22.8■■□□□ 1.24
CLN8-213ENST00000637156 APEX2Q9UBZ4 518 aa22.8■■□□□ 1.24
CLN8-213ENST00000637156 ST3GAL5Q9UNP4 418 aa22.8■■□□□ 1.24
CLN8-213ENST00000637156 SOWAHDA6NJG2 315 aa22.79■■□□□ 1.24
CLN8-213ENST00000637156 LACTBL1A8MY62 500 aa22.79■■□□□ 1.24
CLN8-213ENST00000637156 ARHGAP6O43182 974 aa22.79■■□□□ 1.24
CLN8-213ENST00000637156 RPS6KA5O75582 802 aa22.79■■□□□ 1.24
CLN8-213ENST00000637156 MSNP26038 577 aaKnown RBP22.79■■□□□ 1.24
CLN8-213ENST00000637156 TSR1Q2NL82 804 aaKnown RBP22.79■■□□□ 1.24
CLN8-213ENST00000637156 DCAF4L1Q3SXM0 396 aa22.79■■□□□ 1.24
CLN8-213ENST00000637156 WDR49Q8IV35 697 aa22.79■■□□□ 1.24
CLN8-213ENST00000637156 ACAP3Q96P50 834 aa22.79■■□□□ 1.24
CLN8-213ENST00000637156 CRISPLD2Q9H0B8 497 aa22.79■■□□□ 1.24
CLN8-213ENST00000637156 AGO3Q9H9G7 860 aaKnown RBP22.79■■□□□ 1.24
CLN8-213ENST00000637156 NRDCO43847 1150 aa22.79■■□□□ 1.24
CLN8-213ENST00000637156 GRM5P41594 1212 aa22.79■■□□□ 1.24
CLN8-213ENST00000637156 MNX1P50219 401 aaPredicted RBP22.79■■□□□ 1.24
CLN8-213ENST00000637156 MTF1Q14872 753 aa22.79■■□□□ 1.24
CLN8-213ENST00000637156 SURF1Q15526 300 aa22.79■■□□□ 1.24
CLN8-213ENST00000637156 KYAT1Q16773 422 aa22.79■■□□□ 1.24
CLN8-213ENST00000637156 FAM26DQ5JW98 314 aa22.79■■□□□ 1.24
CLN8-213ENST00000637156 UBXN11Q5T124 520 aa22.79■■□□□ 1.24
CLN8-213ENST00000637156 ZNF618Q5T7W0 954 aa22.79■■□□□ 1.24
CLN8-213ENST00000637156 RAD9BQ6WBX8 426 aa22.79■■□□□ 1.24
CLN8-213ENST00000637156 TMTC1Q8IUR5 882 aa22.79■■□□□ 1.24
CLN8-213ENST00000637156 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.79■■□□□ 1.24
CLN8-213ENST00000637156 DNAJC12Q9UKB3 198 aa22.79■■□□□ 1.24
CLN8-213ENST00000637156 HES2Q9Y543 173 aa22.79■■□□□ 1.24
CLN8-213ENST00000637156 SGPL1O95470 568 aa22.78■■□□□ 1.24
CLN8-213ENST00000637156 VNN1O95497 513 aa22.78■■□□□ 1.24
CLN8-213ENST00000637156 CST3P01034 146 aaPredicted RBP22.78■■□□□ 1.24
CLN8-213ENST00000637156 NFX1Q12986 1120 aaKnown RBP22.78■■□□□ 1.24
CLN8-213ENST00000637156 EFCAB13Q8IY85 973 aa22.78■■□□□ 1.24
CLN8-213ENST00000637156 ELMO3Q96BJ8 720 aa22.78■■□□□ 1.24
CLN8-213ENST00000637156 SNTG2Q9NY99 539 aa22.78■■□□□ 1.24
CLN8-213ENST00000637156 FRMPD3Q5JV73 1810 aa22.77■■□□□ 1.24
CLN8-213ENST00000637156 CKBP12277 381 aa22.77■■□□□ 1.24
CLN8-213ENST00000637156 JAM2P57087 298 aa22.77■■□□□ 1.24
CLN8-213ENST00000637156 DUOXA2Q1HG44 320 aa22.77■■□□□ 1.24
CLN8-213ENST00000637156 FBXO47Q5MNV8 452 aa22.77■■□□□ 1.24
CLN8-213ENST00000637156 CYP26C1Q6V0L0 522 aa22.77■■□□□ 1.24
CLN8-213ENST00000637156 GPIHBP1Q8IV16 184 aa22.77■■□□□ 1.24
CLN8-213ENST00000637156 ARHGEF19Q8IW93 802 aa22.77■■□□□ 1.24
CLN8-213ENST00000637156 U2AF1L4Q8WU68 220 aaKnown RBP22.77■■□□□ 1.24
CLN8-213ENST00000637156 SYN2Q92777 582 aaPredicted RBP22.77■■□□□ 1.24
CLN8-213ENST00000637156 UBE2TQ9NPD8 197 aaPredicted RBP22.77■■□□□ 1.24
CLN8-213ENST00000637156 AIPL1Q9NZN9 384 aa22.77■■□□□ 1.24
CLN8-213ENST00000637156 MROH7Q68CQ1 1323 aa22.77■■□□□ 1.24
CLN8-213ENST00000637156 IL18RAPO95256 599 aa22.77■■□□□ 1.24
CLN8-213ENST00000637156 HSPA1AP0DMV8 641 aaKnown RBP22.77■■□□□ 1.24
CLN8-213ENST00000637156 HSPA1BP0DMV9 641 aaKnown RBP22.77■■□□□ 1.24
CLN8-213ENST00000637156 AP3M2P53677 418 aa22.77■■□□□ 1.24
CLN8-213ENST00000637156 CDK17Q00537 523 aa22.77■■□□□ 1.24
CLN8-213ENST00000637156 BIRC3Q13489 604 aa22.77■■□□□ 1.24
CLN8-213ENST00000637156 RAPGEF1Q13905 1077 aa22.77■■□□□ 1.24
CLN8-213ENST00000637156 TRAF7Q6Q0C0 670 aa22.77■■□□□ 1.24
CLN8-213ENST00000637156 PI4K2AQ9BTU6 479 aa22.77■■□□□ 1.24
CLN8-213ENST00000637156 SEZ6LQ9BYH1 1024 aa22.77■■□□□ 1.24
CLN8-213ENST00000637156 STK33Q9BYT3 514 aa22.77■■□□□ 1.24
CLN8-213ENST00000637156 MTMR12Q9C0I1 747 aa22.77■■□□□ 1.24
CLN8-213ENST00000637156 NUCKS1Q9H1E3 243 aaKnown RBP22.77■■□□□ 1.24
CLN8-213ENST00000637156 CXCL16Q9H2A7 254 aa22.77■■□□□ 1.24
CLN8-213ENST00000637156 ZNHIT6Q9NWK9 470 aaKnown RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms