RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 ITGA4P13612 1032 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 ADAM9Q13443 819 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 SNRNP35Q16560 246 aaKnown RBP9.28□□□□□ -0.92
CDKL5-209ENST00000635828 ALKAL1Q6UXT8 129 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 YME1L1Q96TA2 773 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 RSAD1Q9HA92 442 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 TBC1D13Q9NVG8 400 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 RMND1Q9NWS8 449 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 N4BP3O15049 544 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 BCAR1P56945 870 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 APBA1Q02410 837 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 Q7L0L9 218 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 LUZP1Q86V48 1076 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 RNF214Q8ND24 703 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 TMEM206Q9H813 350 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 DMAC2Q9NW81 257 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 TMEM161AQ9NX61 479 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 TRAF3IP3Q9Y228 551 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 SMIM28A0A1B0GU29 152 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 OGTO15294 1046 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 EXOC3O60645 756 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 ZC3H11AO75152 810 aaKnown RBP eCLIP9.28□□□□□ -0.92
CDKL5-209ENST00000635828 AMHP03971 560 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 NCBP1Q09161 790 aaKnown RBP9.28□□□□□ -0.92
CDKL5-209ENST00000635828 MRPL10Q7Z7H8 261 aaKnown RBP9.28□□□□□ -0.92
CDKL5-209ENST00000635828 ADPGKQ9BRR6 497 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 SRRTQ9BXP5 876 aaKnown RBP9.28□□□□□ -0.92
CDKL5-209ENST00000635828 NKX2-4Q9H2Z4 354 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 RBAKQ9NYW8 714 aaPredicted RBP9.28□□□□□ -0.92
CDKL5-209ENST00000635828 LRFN2Q9ULH4 789 aa9.28□□□□□ -0.92
CDKL5-209ENST00000635828 TTC26A0AVF1 554 aa9.27□□□□□ -0.92
CDKL5-209ENST00000635828 ZNF623O75123 536 aa9.27□□□□□ -0.92
CDKL5-209ENST00000635828 RPLP2P05387 115 aaKnown RBP9.27□□□□□ -0.92
CDKL5-209ENST00000635828 PFKMP08237 780 aa9.27□□□□□ -0.92
CDKL5-209ENST00000635828 ACTN1P12814 892 aa9.27□□□□□ -0.92
CDKL5-209ENST00000635828 ATP1A3P13637 1013 aa9.27□□□□□ -0.92
CDKL5-209ENST00000635828 AXLP30530 894 aa9.27□□□□□ -0.92
CDKL5-209ENST00000635828 GRM5P41594 1212 aa9.27□□□□□ -0.92
CDKL5-209ENST00000635828 CLCNKBP51801 687 aa9.27□□□□□ -0.92
CDKL5-209ENST00000635828 PAK1Q13153 545 aa9.27□□□□□ -0.92
CDKL5-209ENST00000635828 NCAPHQ15003 741 aa9.27□□□□□ -0.92
CDKL5-209ENST00000635828 SASS6Q6UVJ0 657 aa9.27□□□□□ -0.92
CDKL5-209ENST00000635828 DHX40Q8IX18 779 aaKnown RBP9.27□□□□□ -0.92
CDKL5-209ENST00000635828 SNX27Q96L92 541 aa9.27□□□□□ -0.92
CDKL5-209ENST00000635828 ACAP3Q96P50 834 aa9.27□□□□□ -0.92
CDKL5-209ENST00000635828 TRAIPQ9BWF2 469 aa9.27□□□□□ -0.92
CDKL5-209ENST00000635828 CWH43Q9H720 699 aa9.27□□□□□ -0.92
CDKL5-209ENST00000635828 ATG2AQ2TAZ0 1938 aa9.27□□□□□ -0.93
CDKL5-209ENST00000635828 PDXKO00764 312 aa9.27□□□□□ -0.93
CDKL5-209ENST00000635828 BAIAP3O94812 1187 aa9.27□□□□□ -0.93
CDKL5-209ENST00000635828 PARNO95453 639 aaKnown RBP9.27□□□□□ -0.93
CDKL5-209ENST00000635828 CST3P01034 146 aaPredicted RBP9.27□□□□□ -0.93
CDKL5-209ENST00000635828 MCF2P10911 925 aa9.27□□□□□ -0.93
CDKL5-209ENST00000635828 GPD1LQ8N335 351 aa9.27□□□□□ -0.93
CDKL5-209ENST00000635828 AOPEPQ8N6M6 819 aa9.27□□□□□ -0.93
CDKL5-209ENST00000635828 KCNN1Q92952 543 aa9.27□□□□□ -0.93
CDKL5-209ENST00000635828 MTMR12Q9C0I1 747 aa9.27□□□□□ -0.93
CDKL5-209ENST00000635828 NRDE2Q9H7Z3 1164 aa9.27□□□□□ -0.93
CDKL5-209ENST00000635828 ALG13Q9NP73 1137 aaKnown RBP9.27□□□□□ -0.93
CDKL5-209ENST00000635828 FANCLQ9NW38 375 aa9.27□□□□□ -0.93
CDKL5-209ENST00000635828 PRG3Q9Y2Y8 225 aaPredicted RBP9.27□□□□□ -0.93
CDKL5-209ENST00000635828 LINC01553A4QN01 128 aa9.27□□□□□ -0.93
CDKL5-209ENST00000635828 CCNE1P24864 410 aa9.27□□□□□ -0.93
CDKL5-209ENST00000635828 DNAJB2P25686 324 aa9.27□□□□□ -0.93
CDKL5-209ENST00000635828 BMP8BP34820 402 aa9.27□□□□□ -0.93
CDKL5-209ENST00000635828 TAS1R1Q7RTX1 841 aa9.27□□□□□ -0.93
CDKL5-209ENST00000635828 NPAS4Q8IUM7 802 aa9.27□□□□□ -0.93
CDKL5-209ENST00000635828 FEZF2Q8TBJ5 459 aa9.27□□□□□ -0.93
CDKL5-209ENST00000635828 LRRIQ3A6PVS8 624 aaPredicted RBP9.26□□□□□ -0.93
CDKL5-209ENST00000635828 DNAJB1P25685 340 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 PPP3CAQ08209 521 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 BTG3Q14201 252 aaPredicted RBP9.26□□□□□ -0.93
CDKL5-209ENST00000635828 CSGALNACT2Q8N6G5 542 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 XXYLT1Q8NBI6 393 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 BORCS6Q96GS4 357 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 TTYH1Q9H313 450 aaPredicted RBP9.26□□□□□ -0.93
CDKL5-209ENST00000635828 PRRC2BQ5JSZ5 2229 aaKnown RBP9.26□□□□□ -0.93
CDKL5-209ENST00000635828 HCRTO43612 131 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 EXTL3O43909 919 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 PRKCSHP14314 528 aaPredicted RBP9.26□□□□□ -0.93
CDKL5-209ENST00000635828 HTRA4P83105 476 aaPredicted RBP9.26□□□□□ -0.93
CDKL5-209ENST00000635828 KIF12Q96FN5 646 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 CCDC34Q96HJ3 373 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 FBXL18Q96ME1 805 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 PPP1R10Q96QC0 940 aaKnown RBP9.26□□□□□ -0.93
CDKL5-209ENST00000635828 VN1R3Q9BXE9 311 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 EXOC7Q9UPT5 735 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 VWA8A3KMH1 1905 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 RALGAPA2Q2PPJ7 1873 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 H0YCG3 227 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 PSMA7O14818 248 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 GARTP22102 1010 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 TFAMQ00059 246 aaKnown RBP9.26□□□□□ -0.93
CDKL5-209ENST00000635828 CBWD6Q4V339 395 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 NOMO2Q5JPE7 1267 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 CBWD3Q5JTY5 395 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 CBWD5Q5RIA9 395 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 CD300LGQ6UXG3 332 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 HS2ST1Q7LGA3 356 aa9.26□□□□□ -0.93
CDKL5-209ENST00000635828 AUTS2Q8WXX7 1259 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms