RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 SLFN11Q7Z7L1 901 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 NT5DC3Q86UY8 548 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 GBP7Q8N8V2 638 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 CLEC4DQ8WXI8 215 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 KLRG1Q96E93 195 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 CABS1Q96KC9 395 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 NIFKQ9BYG3 293 aaKnown RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 PORCNQ9H237 461 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 ACTR5Q9H9F9 607 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 A0A087WUV0 522 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 FZD9O00144 591 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 BUB1BO60566 1050 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 TLR2O60603 784 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 PPP1R37O75864 691 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 STK10O94804 968 aaKnown RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 PLEKP08567 350 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 GNAT1P11488 350 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 KDM7AQ6ZMT4 941 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 USP50Q70EL3 339 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 ERICH1Q86X53 443 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 NUP85Q9BW27 656 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 ASB7Q9H672 318 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 CCDC88AQ3V6T2 1871 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 INO80B-WBP1J3KQ70 363 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 RNF225M0QZC1 329 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 ADCY8P40145 1251 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 SEPT14Q6ZU15 432 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 TRMT1LQ7Z2T5 733 aaKnown RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 GABPB2Q8TAK5 448 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 ATP8B4Q8TF62 1192 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 FBXL18Q96ME1 805 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 MMP19Q99542 508 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 GPRC5DQ9NZD1 345 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 TRIM10Q9UDY6 481 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 ANAPC7Q9UJX3 599 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 ZNF536O15090 1300 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 GH1P01241 217 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 PRKCBP05771 671 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 SETSIPP0DME0 302 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 PPIL2Q13356 520 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 ACAP1Q15027 740 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 RSPH3Q86UC2 560 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 BRSK2Q8IWQ3 736 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 CYP2W1Q8TAV3 490 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 SUGCTQ9HAC7 445 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 A1CFQ9NQ94 594 aaKnown RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 ADCY3O60266 1144 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 CXCR5P32302 372 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 FKBP1BP68106 108 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 MAPK7Q13164 816 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 SV2AQ7L0J3 742 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 SLC13A5Q86YT5 568 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 SREK1Q8WXA9 508 aaKnown RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 SLC10A4Q96EP9 437 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 ASNSD1Q9NWL6 643 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 GGA2Q9UJY4 613 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 LAMB1P07942 1786 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 M0QZ92 97 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 EPHB6O15197 1021 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 TLR3O15455 904 aaKnown RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 CLTAP09496 248 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 CYP2C8P10632 490 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 CETPP11597 493 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 PAX3P23760 479 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 PTP4A2Q12974 167 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 CUL2Q13617 745 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 CCDC14Q49A88 953 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 CCDC137Q6PK04 289 aaKnown RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 LBX2Q6XYB7 198 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 METTL13Q8N6R0 699 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 SNF8Q96H20 258 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 UIMC1Q96RL1 719 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 VTA1Q9NP79 307 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 ANKFY1Q9P2R3 1169 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 NAV1Q8NEY1 1877 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 LY75O60449 1722 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 ZC3H4Q9UPT8 1303 aaKnown RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 CNTNAP1P78357 1384 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 OPLAHO14841 1288 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 NCK2O43639 380 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 CYP11B1P15538 503 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 EIF4BP23588 611 aaKnown RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 ALDH5A1P51649 535 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 CASP5P51878 434 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 PMS2P54278 862 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 RNASELQ05823 741 aaKnown RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 TRAIPQ9BWF2 469 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 GOLGA8IPA6NC78 632 aa4.85□□□□□ -1.63
SCN1A-210ENST00000635776 GOLGA8JA6NMD2 632 aa4.85□□□□□ -1.63
SCN1A-210ENST00000635776 CYP26A1O43174 497 aa4.85□□□□□ -1.63
SCN1A-210ENST00000635776 HLA-DRAP01903 254 aa4.85□□□□□ -1.63
SCN1A-210ENST00000635776 GUCY2FP51841 1108 aa4.85□□□□□ -1.63
SCN1A-210ENST00000635776 SKOR1P84550 965 aa4.85□□□□□ -1.63
SCN1A-210ENST00000635776 STAT4Q14765 748 aa4.85□□□□□ -1.63
SCN1A-210ENST00000635776 ZNF699Q32M78 642 aa4.85□□□□□ -1.63
SCN1A-210ENST00000635776 ZACNQ401N2 412 aa4.85□□□□□ -1.63
SCN1A-210ENST00000635776 CCDC113Q9H0I3 377 aa4.85□□□□□ -1.63
SCN1A-210ENST00000635776 SPC25Q9HBM1 224 aa4.85□□□□□ -1.63
SCN1A-210ENST00000635776 ARHGAP28Q9P2N2 729 aa4.85□□□□□ -1.63
SCN1A-210ENST00000635776 MYH14Q7Z406 1995 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms