RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 GARTP22102 1010 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 ADSSP30520 456 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 DSC1Q08554 894 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 TUSC3Q13454 348 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 PTPROQ16827 1216 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 ARMCX5Q6P1M9 558 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 COLGALT2Q8IYK4 626 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 SMARCE1Q969G3 411 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 GSDMAQ96QA5 445 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 LMAN2LQ9H0V9 348 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 ALG13Q9NP73 1137 aaKnown RBP16.87■□□□□ 0.29
CLN6-211ENST00000635754 CNTN3Q9P232 1028 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 PLAGL2Q9UPG8 496 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 NT5C1B-RDH14C9J2C7 533 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 KIAA0391O15091 583 aaKnown RBP16.87■□□□□ 0.29
CLN6-211ENST00000635754 KIF20AO95235 890 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 LDHAP00338 332 aaKnown RBP16.87■□□□□ 0.29
CLN6-211ENST00000635754 ALDH2P05091 517 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 GALTP07902 379 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 HOXD13P35453 343 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 TNFSF9P41273 254 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 SLC11A1P49279 550 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 KRT17Q04695 432 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 UBE3AQ05086 875 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 PPP2R3AQ06190 1150 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 ADGRE1Q14246 886 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 KNOP1Q1ED39 458 aaKnown RBP16.87■□□□□ 0.29
CLN6-211ENST00000635754 XKR4Q5GH76 650 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 GLRA4Q5JXX5 417 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 ZBTB41Q5SVQ8 909 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 ALKAL1Q6UXT8 129 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 HS2ST1Q7LGA3 356 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 SLC39A11Q8N1S5 342 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 TMEM169Q96HH4 297 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 CXCL16Q9H2A7 254 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 RPF1Q9H9Y2 349 aaKnown RBP16.87■□□□□ 0.29
CLN6-211ENST00000635754 PLEKHA5Q9HAU0 1116 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 SLC38A7Q9NVC3 462 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 LMCD1Q9NZU5 365 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 CPSF3Q9UKF6 684 aaKnown RBP16.87■□□□□ 0.29
CLN6-211ENST00000635754 FAN1Q9Y2M0 1017 aa16.87■□□□□ 0.29
CLN6-211ENST00000635754 ANK1P16157 1881 aa16.86■□□□□ 0.29
CLN6-211ENST00000635754 SMIM28A0A1B0GU29 152 aa16.86■□□□□ 0.29
CLN6-211ENST00000635754 GRM6O15303 877 aa16.86■□□□□ 0.29
CLN6-211ENST00000635754 KCNE1P15382 129 aa16.86■□□□□ 0.29
CLN6-211ENST00000635754 POU3F3P20264 500 aaPredicted RBP16.86■□□□□ 0.29
CLN6-211ENST00000635754 OR1G1P47890 313 aa16.86■□□□□ 0.29
CLN6-211ENST00000635754 ACOT2P49753 483 aa16.86■□□□□ 0.29
CLN6-211ENST00000635754 SNRPFP62306 86 aaKnown RBP16.86■□□□□ 0.29
CLN6-211ENST00000635754 PLCB3Q01970 1234 aa16.86■□□□□ 0.29
CLN6-211ENST00000635754 ENOX2Q16206 610 aaKnown RBP16.86■□□□□ 0.29
CLN6-211ENST00000635754 SLC10A6Q3KNW5 377 aa16.86■□□□□ 0.29
CLN6-211ENST00000635754 SPPL3Q8TCT6 385 aa16.86■□□□□ 0.29
CLN6-211ENST00000635754 MRPL38Q96DV4 380 aaKnown RBP16.86■□□□□ 0.29
CLN6-211ENST00000635754 PPP1R10Q96QC0 940 aaKnown RBP16.86■□□□□ 0.29
CLN6-211ENST00000635754 CBWD1Q9BRT8 395 aa16.86■□□□□ 0.29
CLN6-211ENST00000635754 LMBRD1Q9NUN5 540 aa16.86■□□□□ 0.29
CLN6-211ENST00000635754 CGNQ9P2M7 1197 aaKnown RBP16.86■□□□□ 0.29
CLN6-211ENST00000635754 LZTS1Q9Y250 596 aa16.86■□□□□ 0.29
CLN6-211ENST00000635754 STXBP5LQ9Y2K9 1186 aa16.86■□□□□ 0.29
CLN6-211ENST00000635754 PCDHA5Q9Y5H7 936 aa16.86■□□□□ 0.29
CLN6-211ENST00000635754 ATG2AQ2TAZ0 1938 aa16.85■□□□□ 0.29
CLN6-211ENST00000635754 TTC26A0AVF1 554 aa16.85■□□□□ 0.29
CLN6-211ENST00000635754 NRP1O14786 923 aa16.85■□□□□ 0.29
CLN6-211ENST00000635754 TGFB1I1O43294 461 aa16.85■□□□□ 0.29
CLN6-211ENST00000635754 NAB2Q15742 525 aa16.85■□□□□ 0.29
CLN6-211ENST00000635754 SPATA20Q8TB22 786 aa16.85■□□□□ 0.29
CLN6-211ENST00000635754 GOLGA5Q8TBA6 731 aa16.85■□□□□ 0.29
CLN6-211ENST00000635754 NOC3LQ8WTT2 800 aaKnown RBP16.85■□□□□ 0.29
CLN6-211ENST00000635754 POF1BQ8WVV4 589 aa16.85■□□□□ 0.29
CLN6-211ENST00000635754 ERCC4Q92889 916 aaPredicted RBP16.85■□□□□ 0.29
CLN6-211ENST00000635754 SAAL1Q96ER3 474 aa16.85■□□□□ 0.29
CLN6-211ENST00000635754 IGSF21Q96ID5 467 aa16.85■□□□□ 0.29
CLN6-211ENST00000635754 FAM213AQ9BRX8 229 aa16.85■□□□□ 0.29
CLN6-211ENST00000635754 GTPBP4Q9BZE4 634 aaKnown RBP16.85■□□□□ 0.29
CLN6-211ENST00000635754 PCIF1Q9H4Z3 704 aa16.85■□□□□ 0.29
CLN6-211ENST00000635754 AGPAT3Q9NRZ7 376 aa16.85■□□□□ 0.29
CLN6-211ENST00000635754 PUF60Q9UHX1 559 aaKnown RBP16.85■□□□□ 0.29
CLN6-211ENST00000635754 PRG3Q9Y2Y8 225 aaPredicted RBP16.85■□□□□ 0.29
CLN6-211ENST00000635754 MTCH2Q9Y6C9 303 aa16.85■□□□□ 0.29
CLN6-211ENST00000635754 CASTOR2A6NHX0 329 aa16.84■□□□□ 0.29
CLN6-211ENST00000635754 MEFVO15553 781 aaPredicted RBP16.84■□□□□ 0.29
CLN6-211ENST00000635754 POU5F1Q01860 360 aaKnown RBP16.84■□□□□ 0.29
CLN6-211ENST00000635754 TMEM173Q86WV6 379 aaPredicted RBP16.84■□□□□ 0.29
CLN6-211ENST00000635754 CD302Q8IX05 232 aa16.84■□□□□ 0.29
CLN6-211ENST00000635754 GPD1LQ8N335 351 aa16.84■□□□□ 0.29
CLN6-211ENST00000635754 FAM212AQ96EL1 285 aa16.84■□□□□ 0.29
CLN6-211ENST00000635754 TSPAN18Q96SJ8 248 aa16.84■□□□□ 0.29
CLN6-211ENST00000635754 COLEC11Q9BWP8 271 aa16.84■□□□□ 0.29
CLN6-211ENST00000635754 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.84■□□□□ 0.29
CLN6-211ENST00000635754 PRRC2BQ5JSZ5 2229 aaKnown RBP16.83■□□□□ 0.29
CLN6-211ENST00000635754 LACTBL1A8MY62 500 aa16.83■□□□□ 0.28
CLN6-211ENST00000635754 XPOTO43592 962 aaKnown RBP16.83■□□□□ 0.28
CLN6-211ENST00000635754 EXTL3O43909 919 aa16.83■□□□□ 0.28
CLN6-211ENST00000635754 CSPG5O95196 566 aa16.83■□□□□ 0.28
CLN6-211ENST00000635754 IL18RAPO95256 599 aa16.83■□□□□ 0.28
CLN6-211ENST00000635754 HSP90AA2PQ14568 343 aaPredicted RBP16.83■□□□□ 0.28
CLN6-211ENST00000635754 TIGD5Q53EQ6 642 aa16.83■□□□□ 0.28
CLN6-211ENST00000635754 ZNF658Q5TYW1 1059 aaPredicted RBP16.83■□□□□ 0.28
CLN6-211ENST00000635754 CRELD2Q6UXH1 353 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms