RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 KRT222Q8N1A0 295 aa5.99□□□□□ -1.45
NEK3-211ENST00000629912 PPM1KQ8N3J5 372 aa5.99□□□□□ -1.45
NEK3-211ENST00000629912 RASGEF1CQ8N431 466 aa5.99□□□□□ -1.45
NEK3-211ENST00000629912 LINC01465Q8N7H1 131 aa5.99□□□□□ -1.45
NEK3-211ENST00000629912 C2orf69Q8N8R5 385 aa5.99□□□□□ -1.45
NEK3-211ENST00000629912 EIF1ADQ8N9N8 165 aaKnown RBP5.99□□□□□ -1.45
NEK3-211ENST00000629912 EPS8L1Q8TE68 723 aa5.99□□□□□ -1.45
NEK3-211ENST00000629912 BRI3BPQ8WY22 251 aa5.99□□□□□ -1.45
NEK3-211ENST00000629912 CTNNBL1Q8WYA6 563 aaPredicted RBP5.99□□□□□ -1.45
NEK3-211ENST00000629912 COPS5Q92905 334 aa5.99□□□□□ -1.45
NEK3-211ENST00000629912 KAT5Q92993 513 aa5.99□□□□□ -1.45
NEK3-211ENST00000629912 HES6Q96HZ4 224 aa5.99□□□□□ -1.45
NEK3-211ENST00000629912 FAXDC2Q96IV6 333 aa5.99□□□□□ -1.45
NEK3-211ENST00000629912 RPS6KC1Q96S38 1066 aa5.99□□□□□ -1.45
NEK3-211ENST00000629912 MSTO1Q9BUK6 570 aa5.99□□□□□ -1.45
NEK3-211ENST00000629912 TARS2Q9BW92 718 aaKnown RBP5.99□□□□□ -1.45
NEK3-211ENST00000629912 VIPAS39Q9H9C1 493 aa5.99□□□□□ -1.45
NEK3-211ENST00000629912 GBA2Q9HCG7 927 aaPredicted RBP5.99□□□□□ -1.45
NEK3-211ENST00000629912 PDE11AQ9HCR9 933 aa5.99□□□□□ -1.45
NEK3-211ENST00000629912 PTPRHQ9HD43 1115 aa5.99□□□□□ -1.45
NEK3-211ENST00000629912 ZCCHC17Q9NP64 241 aaKnown RBP5.99□□□□□ -1.45
NEK3-211ENST00000629912 PDGFCQ9NRA1 345 aa5.99□□□□□ -1.45
NEK3-211ENST00000629912 TOPORSQ9NS56 1045 aaPredicted RBP5.99□□□□□ -1.45
NEK3-211ENST00000629912 ERAP1Q9NZ08 941 aa5.99□□□□□ -1.45
NEK3-211ENST00000629912 AMFRQ9UKV5 643 aa5.99□□□□□ -1.45
NEK3-211ENST00000629912 PCDHB2Q9Y5E7 798 aa5.99□□□□□ -1.45
NEK3-211ENST00000629912 MIF4GDA9UHW6 222 aaKnown RBP5.98□□□□□ -1.45
NEK3-211ENST00000629912 BHMG1C9JSJ3 638 aaPredicted RBP5.98□□□□□ -1.45
NEK3-211ENST00000629912 CCDC188H7C350 402 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 DDX3YO15523 660 aaKnown RBP5.98□□□□□ -1.45
NEK3-211ENST00000629912 BUB1BO60566 1050 aaPredicted RBP5.98□□□□□ -1.45
NEK3-211ENST00000629912 SASH3O75995 380 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 SEC31AO94979 1220 aaKnown RBP5.98□□□□□ -1.45
NEK3-211ENST00000629912 CLSTN1O94985 981 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 VNN1O95497 513 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 C22orf31O95567 290 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 EDN1P05305 212 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 PRKCBP05771 671 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 SRGAP2CP0DJJ0 459 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 UNGP13051 313 aaPredicted RBP5.98□□□□□ -1.45
NEK3-211ENST00000629912 ACO1P21399 889 aaKnown RBP5.98□□□□□ -1.45
NEK3-211ENST00000629912 TBXAS1P24557 533 aaPredicted RBP5.98□□□□□ -1.45
NEK3-211ENST00000629912 MAPK4P31152 587 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 ACOT2P49753 483 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 CBX1P83916 185 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 DRP2Q13474 957 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 GRB14Q14449 540 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 KYAT1Q16773 422 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 DUOXA2Q1HG44 320 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 CLEC16AQ2KHT3 1053 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 TMEM63BQ5T3F8 832 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 WDR78Q5VTH9 848 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 TDRD10Q5VZ19 366 aaKnown RBP5.98□□□□□ -1.45
NEK3-211ENST00000629912 C11orf63Q6NUN7 778 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 EFCAB12Q6NXP0 572 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 PPP1R2P3Q6NXS1 205 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 PLEKHH3Q7Z736 793 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 DAAM2Q86T65 1068 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 SLC47A2Q86VL8 602 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 PALB2Q86YC2 1186 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 WDR49Q8IV35 697 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 METTL13Q8N6R0 699 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 USP38Q8NB14 1042 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 RNF149Q8NC42 400 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 PPTC7Q8NI37 304 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 SLC20A1Q8WUM9 679 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.98□□□□□ -1.45
NEK3-211ENST00000629912 ARHGEF26Q96DR7 871 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 MS4A14Q96JA4 679 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 VCPIP1Q96JH7 1222 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 PARK7Q99497 189 aaKnown RBP5.98□□□□□ -1.45
NEK3-211ENST00000629912 PTPN18Q99952 460 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.98□□□□□ -1.45
NEK3-211ENST00000629912 LRRC1Q9BTT6 524 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 THAP2Q9H0W7 228 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 ABHD16BQ9H3Z7 469 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 RNPEPQ9H4A4 650 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 SUGCTQ9HAC7 445 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 AVENQ9NQS1 362 aaPredicted RBP5.98□□□□□ -1.45
NEK3-211ENST00000629912 C1orf112Q9NSG2 853 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.98□□□□□ -1.45
NEK3-211ENST00000629912 TAS2R14Q9NYV8 317 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 RBAKQ9NYW8 714 aaPredicted RBP5.98□□□□□ -1.45
NEK3-211ENST00000629912 UVRAGQ9P2Y5 699 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 CPSF3Q9UKF6 684 aaKnown RBP5.98□□□□□ -1.45
NEK3-211ENST00000629912 TNFSF13BQ9Y275 285 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 IVNS1ABPQ9Y6Y0 642 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 ANK1P16157 1881 aa5.98□□□□□ -1.45
NEK3-211ENST00000629912 TMCO5BA8MYB1 307 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 KCNK3O14649 394 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 CEP104O60308 925 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 B4GALT4O60513 344 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 ASS1P00966 412 aaKnown RBP5.97□□□□□ -1.45
NEK3-211ENST00000629912 CYP1A1P04798 512 aaPredicted RBP5.97□□□□□ -1.45
NEK3-211ENST00000629912 LGALS2P05162 132 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 MMEP08473 750 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 CLTAP09496 248 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 HOXC6P09630 235 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 POTEJP0CG39 1038 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 MYBL1P10243 752 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms