RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 PNMA6AP0CW24 399 aaPredicted RBP13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 MAGOHP61326 146 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 ATPAF2Q8N5M1 289 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 DEPDC7Q96QD5 511 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 PCIF1Q9H4Z3 704 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 CDYLQ9Y232 598 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 TLR2O60603 784 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 H2AFYO75367 372 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 CLCN6P51797 869 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 SLC7A5Q01650 507 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 ANO4Q32M45 955 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 ACCSLQ4AC99 568 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 ALKBH5Q6P6C2 394 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 LVRNQ6Q4G3 990 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 OSTNP61366 133 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 SCN4BQ8IWT1 228 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 XXYLT1Q8NBI6 393 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 ZNF564Q8TBZ8 553 aaPredicted RBP13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 GPT2Q8TD30 523 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 FAM49AQ9H0Q0 323 aaPredicted RBP13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 KLHL31Q9H511 634 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 EPS8L2Q9H6S3 715 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 CCNE1P24864 410 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 DNAL1Q4LDG9 190 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 SPDYAQ5MJ70 313 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 TMEM179Q6ZVK1 233 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 ELAC2Q9BQ52 826 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 TSEN34Q9BSV6 310 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 USP44Q9H0E7 712 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 TMED10P49755 219 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 RESP18Q5W5W9 173 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 ICE2Q659A1 982 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 PARD6BQ9BYG5 372 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 ASCC2Q9H1I8 757 aaPredicted RBP13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 ERCC6L2Q5T890 1561 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 C21orf2O43822 256 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 THAP11Q96EK4 314 aa13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 SMG5Q9UPR3 1016 aaKnown RBP13.88□□□□□ -0.19
SYNGAP1-208ENST00000629380 M0QYV0 167 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 ZMYM1Q5SVZ6 1142 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 SMYD4Q8IYR2 804 aaPredicted RBP13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 C17orf80Q9BSJ5 609 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 AGLP35573 1532 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 MYO1GB0I1T2 1018 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 MARK3P27448 753 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 LGALS16A8MUM7 142 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 ADCY3O60266 1144 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 FDX1P10109 184 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 RHPN2Q8IUC4 686 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 VPS37AQ8NEZ2 397 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 ARL2BPQ9Y2Y0 163 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 MYH7BA7E2Y1 1941 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 SEC24BO95487 1268 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 ARFIP2P53365 341 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 APLFQ8IW19 511 aaPredicted RBP13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 TMEM106CQ9BVX2 250 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 TUBGCP4Q9UGJ1 667 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 DCTN4Q9UJW0 460 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 GDAQ9Y2T3 454 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 GMNCA6NCL1 334 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 MYO1CO00159 1063 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 ALDH1A1P00352 501 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 TTLL4Q14679 1199 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 UNC13DQ70J99 1090 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 KRT78Q8N1N4 520 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 RBBP8Q99708 897 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 ANO9A1A5B4 782 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 POTEFA5A3E0 1075 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 CYP2C19P33261 490 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 ADD1P35611 737 aaKnown RBP13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 RANBP1P43487 201 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 MTMR1Q13613 665 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 ADAM30Q9UKF2 790 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 CFAP99D6REC4 459 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 M0R3G1 203 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 TRIM13O60858 407 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 HES6Q96HZ4 224 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 PRPF18Q99633 342 aaKnown RBP13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 UNC45AQ9H3U1 944 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 AFF4Q9UHB7 1163 aaKnown RBP13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 SETBP1Q9Y6X0 1596 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 RAD23BP54727 409 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 MTHFD1LQ6UB35 978 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 CARD9Q9H257 536 aa13.87□□□□□ -0.19
SYNGAP1-208ENST00000629380 MAPRE1Q15691 268 aaKnown RBP13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 DCAF4L1Q3SXM0 396 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 ZBED8Q8IZ13 594 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 CALML6Q8TD86 181 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 MRPL4Q9BYD3 311 aaKnown RBP13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 SPTLC3Q9NUV7 552 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 PARVAQ9NVD7 372 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 ZNF711Q9Y462 761 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 TMEM191CA6NGB0 347 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 TRAPPC3O43617 180 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 CYBBP04839 570 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 ANXA11P50995 505 aaKnown RBP13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 MAN1C1Q9NR34 630 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 DIP2AQ14689 1571 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 FAM47E-STBD1D6RA91 191 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 ECE2O60344 883 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms