RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 TMEM31Q5JXX7 168 aa17.43■□□□□ 0.38
CHRNA4-211ENST00000628606 ATAT1Q5SQI0 421 aa17.43■□□□□ 0.38
CHRNA4-211ENST00000628606 KIAA0319Q5VV43 1072 aa17.43■□□□□ 0.38
CHRNA4-211ENST00000628606 HAUS6Q7Z4H7 955 aa17.43■□□□□ 0.38
CHRNA4-211ENST00000628606 SLC22A17Q8WUG5 538 aa17.43■□□□□ 0.38
CHRNA4-211ENST00000628606 KHSRPQ92945 711 aaKnown RBP eCLIP17.43■□□□□ 0.38
CHRNA4-211ENST00000628606 FBXL18Q96ME1 805 aa17.43■□□□□ 0.38
CHRNA4-211ENST00000628606 USP28Q96RU2 1077 aa17.43■□□□□ 0.38
CHRNA4-211ENST00000628606 GPR62Q9BZJ7 368 aa17.43■□□□□ 0.38
CHRNA4-211ENST00000628606 PTPRHQ9HD43 1115 aa17.43■□□□□ 0.38
CHRNA4-211ENST00000628606 SLC38A7Q9NVC3 462 aa17.43■□□□□ 0.38
CHRNA4-211ENST00000628606 ANKFY1Q9P2R3 1169 aa17.43■□□□□ 0.38
CHRNA4-211ENST00000628606 FBXO2Q9UK22 296 aaPredicted RBP17.43■□□□□ 0.38
CHRNA4-211ENST00000628606 NR2E1Q9Y466 385 aa17.43■□□□□ 0.38
CHRNA4-211ENST00000628606 F8W810 466 aa17.42■□□□□ 0.38
CHRNA4-211ENST00000628606 K7ENM7 598 aa17.42■□□□□ 0.38
CHRNA4-211ENST00000628606 GLUD1P00367 558 aa17.42■□□□□ 0.38
CHRNA4-211ENST00000628606 CLCN4P51793 760 aa17.42■□□□□ 0.38
CHRNA4-211ENST00000628606 NCKAP1LP55160 1127 aa17.42■□□□□ 0.38
CHRNA4-211ENST00000628606 NOLC1Q14978 699 aaKnown RBP eCLIP17.42■□□□□ 0.38
CHRNA4-211ENST00000628606 GLRA4Q5JXX5 417 aa17.42■□□□□ 0.38
CHRNA4-211ENST00000628606 ZPBP2Q6X784 338 aa17.42■□□□□ 0.38
CHRNA4-211ENST00000628606 RNF135Q8IUD6 432 aa17.42■□□□□ 0.38
CHRNA4-211ENST00000628606 GPR65Q8IYL9 337 aa17.42■□□□□ 0.38
CHRNA4-211ENST00000628606 RNF168Q8IYW5 571 aaPredicted RBP17.42■□□□□ 0.38
CHRNA4-211ENST00000628606 C12orf76Q8N812 135 aaPredicted RBP17.42■□□□□ 0.38
CHRNA4-211ENST00000628606 HASPINQ8TF76 798 aa17.42■□□□□ 0.38
CHRNA4-211ENST00000628606 RIN2Q8WYP3 895 aaPredicted RBP17.42■□□□□ 0.38
CHRNA4-211ENST00000628606 UROC1Q96N76 676 aa17.42■□□□□ 0.38
CHRNA4-211ENST00000628606 CLIC6Q96NY7 704 aa17.42■□□□□ 0.38
CHRNA4-211ENST00000628606 SFXN1Q9H9B4 322 aa17.42■□□□□ 0.38
CHRNA4-211ENST00000628606 CHST7Q9NS84 486 aa17.42■□□□□ 0.38
CHRNA4-211ENST00000628606 CITO14578 2027 aa17.42■□□□□ 0.38
CHRNA4-211ENST00000628606 SMIM28A0A1B0GU29 152 aa17.41■□□□□ 0.38
CHRNA4-211ENST00000628606 LOC730098B7Z3J9 87 aa17.41■□□□□ 0.38
CHRNA4-211ENST00000628606 TEX28O15482 410 aa17.41■□□□□ 0.38
CHRNA4-211ENST00000628606 TRAK2O60296 914 aa17.41■□□□□ 0.38
CHRNA4-211ENST00000628606 BRD1O95696 1058 aa17.41■□□□□ 0.38
CHRNA4-211ENST00000628606 PROZP22891 400 aa17.41■□□□□ 0.38
CHRNA4-211ENST00000628606 LIG4P49917 911 aa17.41■□□□□ 0.38
CHRNA4-211ENST00000628606 FAM171A1Q5VUB5 890 aa17.41■□□□□ 0.38
CHRNA4-211ENST00000628606 PDXDC1Q6P996 788 aa17.41■□□□□ 0.38
CHRNA4-211ENST00000628606 CCDC73Q6ZRK6 1079 aa17.41■□□□□ 0.38
CHRNA4-211ENST00000628606 SV2BQ7L1I2 683 aa17.41■□□□□ 0.38
CHRNA4-211ENST00000628606 CEP57Q86XR8 500 aa17.41■□□□□ 0.38
CHRNA4-211ENST00000628606 CEP120Q8N960 986 aa17.41■□□□□ 0.38
CHRNA4-211ENST00000628606 ZBTB45Q96K62 511 aaPredicted RBP17.41■□□□□ 0.38
CHRNA4-211ENST00000628606 PPP1R10Q96QC0 940 aaKnown RBP17.41■□□□□ 0.38
CHRNA4-211ENST00000628606 PAAF1Q9BRP4 392 aa17.41■□□□□ 0.38
CHRNA4-211ENST00000628606 TTPALQ9BTX7 342 aa17.41■□□□□ 0.38
CHRNA4-211ENST00000628606 RXFP1Q9HBX9 757 aa17.41■□□□□ 0.38
CHRNA4-211ENST00000628606 TSHZ2Q9NRE2 1034 aa17.41■□□□□ 0.38
CHRNA4-211ENST00000628606 CACNG4Q9UBN1 327 aa17.41■□□□□ 0.38
CHRNA4-211ENST00000628606 MORC2Q9Y6X9 1032 aaPredicted RBP17.41■□□□□ 0.38
CHRNA4-211ENST00000628606 HNRNPDLO14979 420 aaKnown RBP17.4■□□□□ 0.38
CHRNA4-211ENST00000628606 TRAPPC3O43617 180 aa17.4■□□□□ 0.38
CHRNA4-211ENST00000628606 GPR37L1O60883 481 aa17.4■□□□□ 0.38
CHRNA4-211ENST00000628606 B3GAT3O94766 335 aa17.4■□□□□ 0.38
CHRNA4-211ENST00000628606 KIF4AO95239 1232 aa17.4■□□□□ 0.38
CHRNA4-211ENST00000628606 EFEMP2O95967 443 aa17.4■□□□□ 0.38
CHRNA4-211ENST00000628606 ZNF131P52739 623 aa17.4■□□□□ 0.38
CHRNA4-211ENST00000628606 KYAT1Q16773 422 aa17.4■□□□□ 0.38
CHRNA4-211ENST00000628606 DCLRE1AQ6PJP8 1040 aa17.4■□□□□ 0.38
CHRNA4-211ENST00000628606 TMC5Q6UXY8 1006 aa17.4■□□□□ 0.38
CHRNA4-211ENST00000628606 USP49Q70CQ1 688 aa17.4■□□□□ 0.38
CHRNA4-211ENST00000628606 DDX27Q96GQ7 796 aaKnown RBP17.4■□□□□ 0.38
CHRNA4-211ENST00000628606 B3GALT6Q96L58 329 aa17.4■□□□□ 0.38
CHRNA4-211ENST00000628606 CXCL16Q9H2A7 254 aa17.4■□□□□ 0.38
CHRNA4-211ENST00000628606 FNIP2Q9P278 1114 aa17.4■□□□□ 0.38
CHRNA4-211ENST00000628606 TBX20Q9UMR3 447 aa17.4■□□□□ 0.38
CHRNA4-211ENST00000628606 SPTLC2O15270 562 aa17.39■□□□□ 0.37
CHRNA4-211ENST00000628606 STAT6P42226 847 aa17.39■□□□□ 0.37
CHRNA4-211ENST00000628606 NASPP49321 788 aaPredicted RBP17.39■□□□□ 0.37
CHRNA4-211ENST00000628606 MCL1Q07820 350 aa17.39■□□□□ 0.37
CHRNA4-211ENST00000628606 NAB2Q15742 525 aa17.39■□□□□ 0.37
CHRNA4-211ENST00000628606 FOXD4L5Q5VV16 416 aaPredicted RBP17.39■□□□□ 0.37
CHRNA4-211ENST00000628606 ALKAL1Q6UXT8 129 aa17.39■□□□□ 0.37
CHRNA4-211ENST00000628606 DYMQ7RTS9 669 aa17.39■□□□□ 0.37
CHRNA4-211ENST00000628606 PALB2Q86YC2 1186 aa17.39■□□□□ 0.37
CHRNA4-211ENST00000628606 GLYCTKQ8IVS8 523 aa17.39■□□□□ 0.37
CHRNA4-211ENST00000628606 LRRC15Q8TF66 581 aa17.39■□□□□ 0.37
CHRNA4-211ENST00000628606 FOXD4L4Q8WXT5 416 aaPredicted RBP17.39■□□□□ 0.37
CHRNA4-211ENST00000628606 SNX27Q96L92 541 aa17.39■□□□□ 0.37
CHRNA4-211ENST00000628606 MAN1C1Q9NR34 630 aa17.39■□□□□ 0.37
CHRNA4-211ENST00000628606 TFIP11Q9UBB9 837 aaKnown RBP17.39■□□□□ 0.37
CHRNA4-211ENST00000628606 MUTYHQ9UIF7 546 aa17.39■□□□□ 0.37
CHRNA4-211ENST00000628606 TMEM189-UBE2V1I3L0A0 370 aa17.38■□□□□ 0.37
CHRNA4-211ENST00000628606 ABLIM1O14639 778 aa17.38■□□□□ 0.37
CHRNA4-211ENST00000628606 C1RP00736 705 aa17.38■□□□□ 0.37
CHRNA4-211ENST00000628606 CLTAP09496 248 aa17.38■□□□□ 0.37
CHRNA4-211ENST00000628606 WEE2P0C1S8 567 aa17.38■□□□□ 0.37
CHRNA4-211ENST00000628606 KCNE1P15382 129 aa17.38■□□□□ 0.37
CHRNA4-211ENST00000628606 SP100P23497 879 aaPredicted RBP17.38■□□□□ 0.37
CHRNA4-211ENST00000628606 CLCNKBP51801 687 aa17.38■□□□□ 0.37
CHRNA4-211ENST00000628606 PSMD5Q16401 504 aa17.38■□□□□ 0.37
CHRNA4-211ENST00000628606 XKR4Q5GH76 650 aa17.38■□□□□ 0.37
CHRNA4-211ENST00000628606 HERC4Q5GLZ8 1057 aaPredicted RBP17.38■□□□□ 0.37
CHRNA4-211ENST00000628606 SPRYD3Q8NCJ5 442 aa17.38■□□□□ 0.37
CHRNA4-211ENST00000628606 LINC00301Q8NCQ3 95 aa17.38■□□□□ 0.37
CHRNA4-211ENST00000628606 HDAC7Q8WUI4 952 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms