RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 CBWD6Q4V339 395 aa13.48□□□□□ -0.25
TNFAIP3-211ENST00000621150 CBWD3Q5JTY5 395 aa13.48□□□□□ -0.25
TNFAIP3-211ENST00000621150 CBWD5Q5RIA9 395 aa13.48□□□□□ -0.25
TNFAIP3-211ENST00000621150 IER5Q5VY09 327 aa13.48□□□□□ -0.25
TNFAIP3-211ENST00000621150 HGSNATQ68CP4 663 aa13.48□□□□□ -0.25
TNFAIP3-211ENST00000621150 ZNF397Q8NF99 534 aaPredicted RBP13.48□□□□□ -0.25
TNFAIP3-211ENST00000621150 LMO3Q8TAP4 145 aa13.48□□□□□ -0.25
TNFAIP3-211ENST00000621150 AFG1LQ8WV93 481 aa13.48□□□□□ -0.25
TNFAIP3-211ENST00000621150 CCDC113Q9H0I3 377 aa13.48□□□□□ -0.25
TNFAIP3-211ENST00000621150 RNPEPQ9H4A4 650 aa13.48□□□□□ -0.25
TNFAIP3-211ENST00000621150 PCIF1Q9H4Z3 704 aa13.48□□□□□ -0.25
TNFAIP3-211ENST00000621150 ERAP1Q9NZ08 941 aa13.48□□□□□ -0.25
TNFAIP3-211ENST00000621150 ARHGAP20Q9P2F6 1191 aa13.48□□□□□ -0.25
TNFAIP3-211ENST00000621150 SCN10AQ9Y5Y9 1956 aa13.48□□□□□ -0.25
TNFAIP3-211ENST00000621150 GOLGA6L9A6NEM1 432 aa13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 KIF2AO00139 706 aaPredicted RBP13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 PPFIA4O75335 1185 aa13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 NDUFA10O95299 355 aa13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 C22orf31O95567 290 aa13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 CCDC175P0C221 793 aa13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 TRIM49P0CI25 452 aa13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 TRIM49CP0CI26 452 aa13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 TERF1P54274 439 aa13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 SMAD3P84022 425 aaKnown RBP13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 ASTE1Q2TB18 679 aaPredicted RBP13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 GBP6Q6ZN66 633 aa13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 ZNF662Q6ZS27 426 aa13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 EXOC8Q8IYI6 725 aa13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 CCDC170Q8IYT3 715 aa13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 RNPC3Q96LT9 517 aaKnown RBP13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 MFSD14AQ96MC6 490 aa13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 FAM161BQ96MY7 647 aa13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 NUCKS1Q9H1E3 243 aaKnown RBP13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 USP20Q9Y2K6 914 aa13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 STXBP5LQ9Y2K9 1186 aa13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 EPN1Q9Y6I3 576 aaPredicted RBP13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 PHLPP2Q6ZVD8 1323 aa13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 VCANP13611 3396 aa13.47□□□□□ -0.25
TNFAIP3-211ENST00000621150 A0A0U1RQJ8 604 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 EIF3CLB5ME19 914 aaKnown RBP13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 P4HA2O15460 535 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 LCA5LO95447 670 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 ACTN1P12814 892 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 UCHL3P15374 230 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 CSF2RAP15509 400 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 ARHGAP25P42331 645 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 CPT1AP50416 773 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 VAMP7P51809 220 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 JAM2P57087 298 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 POLR2FP61218 127 aaKnown RBP13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 ETF1P62495 437 aaKnown RBP13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 DLG4P78352 724 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 PURAQ00577 322 aaKnown RBP13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 PPP3CAQ08209 521 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 IER5LQ5T953 404 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 TCERG1LQ5VWI1 586 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 C16orf59Q7L2K0 433 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 RRAGAQ7L523 313 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 CBWD2Q8IUF1 395 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 ACRBPQ8NEB7 543 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 OR6J1Q8NGC5 347 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 TCP11Q8WWU5 503 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 ATRIPQ8WXE1 791 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 EIF3CQ99613 913 aaKnown RBP13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.46□□□□□ -0.253e-7■■■□□ 16
TNFAIP3-211ENST00000621150 SEZ6LQ9BYH1 1024 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 HAPLN2Q9GZV7 340 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 NHEJ1Q9H9Q4 299 aaPredicted RBP13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 AIPL1Q9NZN9 384 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 AJAP1Q9UKB5 411 aaPredicted RBP13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 MYO6Q9UM54 1294 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 COL1A2P08123 1366 aa13.46□□□□□ -0.25
TNFAIP3-211ENST00000621150 SSU72P8A0A1W2PR75 194 aa13.46□□□□□ -0.26
TNFAIP3-211ENST00000621150 B4GALT4O60513 344 aa13.46□□□□□ -0.26
TNFAIP3-211ENST00000621150 MMP3P08254 477 aa13.46□□□□□ -0.26
TNFAIP3-211ENST00000621150 USP46P62068 366 aa13.46□□□□□ -0.26
TNFAIP3-211ENST00000621150 SNRNP35Q16560 246 aaKnown RBP13.46□□□□□ -0.26
TNFAIP3-211ENST00000621150 EPC2Q52LR7 807 aa13.46□□□□□ -0.26
TNFAIP3-211ENST00000621150 ZNF484Q5JVG2 852 aa13.46□□□□□ -0.26
TNFAIP3-211ENST00000621150 ZNF697Q5TEC3 545 aa13.46□□□□□ -0.26
TNFAIP3-211ENST00000621150 TMEM199Q8N511 208 aa13.46□□□□□ -0.26
TNFAIP3-211ENST00000621150 DEPTORQ8TB45 409 aa13.46□□□□□ -0.26
TNFAIP3-211ENST00000621150 PARD3BQ8TEW8 1205 aa13.46□□□□□ -0.26
TNFAIP3-211ENST00000621150 PRPF31Q8WWY3 499 aaKnown RBP13.46□□□□□ -0.26
TNFAIP3-211ENST00000621150 CLP1Q92989 425 aaKnown RBP13.46□□□□□ -0.26
TNFAIP3-211ENST00000621150 GUCD1Q96NT3 240 aa13.46□□□□□ -0.26
TNFAIP3-211ENST00000621150 JPH2Q9BR39 696 aaPredicted RBP13.46□□□□□ -0.26
TNFAIP3-211ENST00000621150 TRPV6Q9H1D0 765 aa13.46□□□□□ -0.26
TNFAIP3-211ENST00000621150 ZNHIT6Q9NWK9 470 aaKnown RBP13.46□□□□□ -0.26
TNFAIP3-211ENST00000621150 GCNT4Q9P109 453 aa13.46□□□□□ -0.26
TNFAIP3-211ENST00000621150 DAAM1Q9Y4D1 1078 aa13.46□□□□□ -0.26
TNFAIP3-211ENST00000621150 FHOD1Q9Y613 1164 aa13.46□□□□□ -0.26
TNFAIP3-211ENST00000621150 GBF1Q92538 1859 aa13.46□□□□□ -0.26
TNFAIP3-211ENST00000621150 CFAP99D6REC4 459 aa13.45□□□□□ -0.26
TNFAIP3-211ENST00000621150 ABLIM1O14639 778 aa13.45□□□□□ -0.26
TNFAIP3-211ENST00000621150 ZNF263O14978 683 aa13.45□□□□□ -0.26
TNFAIP3-211ENST00000621150 HNRNPDLO14979 420 aaKnown RBP13.45□□□□□ -0.26
TNFAIP3-211ENST00000621150 KIAA0391O15091 583 aaKnown RBP13.45□□□□□ -0.26
TNFAIP3-211ENST00000621150 PLEKP08567 350 aaPredicted RBP13.45□□□□□ -0.26
TNFAIP3-211ENST00000621150 MYL3P08590 195 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms