RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 RNF169Q8NCN4 708 aa4.27□□□□□ -1.73
TARDBP-220ENST00000618606 SLC35B2Q8TB61 432 aa4.27□□□□□ -1.73
TARDBP-220ENST00000618606 SLC5A5Q92911 643 aa4.27□□□□□ -1.73
TARDBP-220ENST00000618606 BRIP1Q9BX63 1249 aa4.27□□□□□ -1.73
TARDBP-220ENST00000618606 C1QTNF7Q9BXJ2 289 aa4.27□□□□□ -1.73
TARDBP-220ENST00000618606 KCTD10Q9H3F6 313 aa4.27□□□□□ -1.73
TARDBP-220ENST00000618606 PIF1Q9H611 641 aa4.27□□□□□ -1.73
TARDBP-220ENST00000618606 FANCLQ9NW38 375 aa4.27□□□□□ -1.73
TARDBP-220ENST00000618606 NOC2LQ9Y3T9 749 aaKnown RBP4.27□□□□□ -1.73
TARDBP-220ENST00000618606 PNPLA7Q6ZV29 1317 aa4.26□□□□□ -1.73
TARDBP-220ENST00000618606 IKBKBO14920 756 aa4.26□□□□□ -1.73
TARDBP-220ENST00000618606 PHF2O75151 1096 aa4.26□□□□□ -1.73
TARDBP-220ENST00000618606 MATN4O95460 622 aa4.26□□□□□ -1.73
TARDBP-220ENST00000618606 LPLP06858 475 aa4.26□□□□□ -1.73
TARDBP-220ENST00000618606 ELANEP08246 267 aa4.26□□□□□ -1.73
TARDBP-220ENST00000618606 CHN2P52757 468 aa4.26□□□□□ -1.73
TARDBP-220ENST00000618606 CLRN1P58418 232 aa4.26□□□□□ -1.73
TARDBP-220ENST00000618606 KRTAP10-6P60371 365 aaPredicted RBP4.26□□□□□ -1.73
TARDBP-220ENST00000618606 MPP3Q13368 585 aa4.26□□□□□ -1.73
TARDBP-220ENST00000618606 DALRD3Q5D0E6 543 aaKnown RBP4.26□□□□□ -1.73
TARDBP-220ENST00000618606 RHOT2Q8IXI1 618 aa4.26□□□□□ -1.73
TARDBP-220ENST00000618606 DUSP26Q9BV47 211 aa4.26□□□□□ -1.73
TARDBP-220ENST00000618606 RNF181Q9P0P0 153 aa4.26□□□□□ -1.73
TARDBP-220ENST00000618606 ATP11BQ9Y2G3 1177 aa4.26□□□□□ -1.73
TARDBP-220ENST00000618606 ATRNL1Q5VV63 1379 aa4.26□□□□□ -1.73
TARDBP-220ENST00000618606 SALL3Q9BXA9 1300 aa4.25□□□□□ -1.73
TARDBP-220ENST00000618606 CXorf49A8MYA2 514 aaPredicted RBP4.25□□□□□ -1.73
TARDBP-220ENST00000618606 CDKL5O76039 1030 aa4.25□□□□□ -1.73
TARDBP-220ENST00000618606 FOSP01100 380 aaPredicted RBP4.25□□□□□ -1.73
TARDBP-220ENST00000618606 RGS19P49795 217 aa4.25□□□□□ -1.73
TARDBP-220ENST00000618606 ATXN7L2Q5T6C5 722 aaPredicted RBP4.25□□□□□ -1.73
TARDBP-220ENST00000618606 ZNF572Q7Z3I7 529 aaPredicted RBP4.25□□□□□ -1.73
TARDBP-220ENST00000618606 GPR149Q86SP6 731 aa4.25□□□□□ -1.73
TARDBP-220ENST00000618606 TMEM132CQ8N3T6 1108 aa4.25□□□□□ -1.73
TARDBP-220ENST00000618606 ZNF366Q8N895 744 aa4.25□□□□□ -1.73
TARDBP-220ENST00000618606 ZNF480Q8WV37 535 aa4.25□□□□□ -1.73
TARDBP-220ENST00000618606 EAF2Q96CJ1 260 aaPredicted RBP4.25□□□□□ -1.73
TARDBP-220ENST00000618606 BOD1Q96IK1 185 aa4.25□□□□□ -1.73
TARDBP-220ENST00000618606 SLC29A3Q9BZD2 475 aa4.25□□□□□ -1.73
TARDBP-220ENST00000618606 SEMA4GQ9NTN9 838 aa4.25□□□□□ -1.73
TARDBP-220ENST00000618606 TMEM74BQ9NUR3 256 aa4.25□□□□□ -1.73
TARDBP-220ENST00000618606 KLHL11Q9NVR0 708 aa4.25□□□□□ -1.73
TARDBP-220ENST00000618606 FAM30AQ9NZY2 134 aa4.25□□□□□ -1.73
TARDBP-220ENST00000618606 PLAAQ9Y263 795 aa4.25□□□□□ -1.73
TARDBP-220ENST00000618606 A0A087X0B3 334 aa4.24□□□□□ -1.73
TARDBP-220ENST00000618606 GSG1L2A8MUP6 293 aa4.24□□□□□ -1.73
TARDBP-220ENST00000618606 ADCY6O43306 1168 aa4.24□□□□□ -1.73
TARDBP-220ENST00000618606 SNRPA1P09661 255 aaKnown RBP4.24□□□□□ -1.73
TARDBP-220ENST00000618606 ITGAMP11215 1152 aa4.24□□□□□ -1.73
TARDBP-220ENST00000618606 BPIP17213 487 aa4.24□□□□□ -1.73
TARDBP-220ENST00000618606 CANXP27824 592 aaKnown RBP4.24□□□□□ -1.73
TARDBP-220ENST00000618606 ABCG1P45844 678 aa4.24□□□□□ -1.73
TARDBP-220ENST00000618606 MXRA7P84157 204 aa4.24□□□□□ -1.73
TARDBP-220ENST00000618606 FSCN1Q16658 493 aaKnown RBP4.24□□□□□ -1.73
TARDBP-220ENST00000618606 UGT8Q16880 541 aa4.24□□□□□ -1.73
TARDBP-220ENST00000618606 MST1LQ2TV78 715 aa4.24□□□□□ -1.73
TARDBP-220ENST00000618606 B3GNTL1Q67FW5 361 aaPredicted RBP4.24□□□□□ -1.73
TARDBP-220ENST00000618606 MAPKAPK5Q8IW41 473 aa4.24□□□□□ -1.73
TARDBP-220ENST00000618606 REPS2Q8NFH8 660 aa4.24□□□□□ -1.73
TARDBP-220ENST00000618606 OR7D4Q8NG98 312 aa4.24□□□□□ -1.73
TARDBP-220ENST00000618606 OR56A1Q8NGH5 318 aa4.24□□□□□ -1.73
TARDBP-220ENST00000618606 ZNF384Q8TF68 577 aa4.24□□□□□ -1.73
TARDBP-220ENST00000618606 UBXN4Q92575 508 aa4.24□□□□□ -1.73
TARDBP-220ENST00000618606 MFSD3Q96ES6 412 aa4.24□□□□□ -1.73
TARDBP-220ENST00000618606 DRC1Q96MC2 740 aa4.24□□□□□ -1.73
TARDBP-220ENST00000618606 FEZ1Q99689 392 aa4.24□□□□□ -1.73
TARDBP-220ENST00000618606 BCO1Q9HAY6 547 aa4.24□□□□□ -1.73
TARDBP-220ENST00000618606 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.23□□□□□ -1.73
TARDBP-220ENST00000618606 WNT10BO00744 389 aa4.23□□□□□ -1.73
TARDBP-220ENST00000618606 C1QL1O75973 258 aa4.23□□□□□ -1.73
TARDBP-220ENST00000618606 ZFPL1O95159 310 aa4.23□□□□□ -1.73
TARDBP-220ENST00000618606 ALOX15P16050 662 aaPredicted RBP4.23□□□□□ -1.73
TARDBP-220ENST00000618606 PTPN7P35236 360 aa4.23□□□□□ -1.73
TARDBP-220ENST00000618606 RARRES1P49788 294 aa4.23□□□□□ -1.73
TARDBP-220ENST00000618606 ZNF81P51508 661 aa4.23□□□□□ -1.73
TARDBP-220ENST00000618606 ZNF169Q14929 603 aaPredicted RBP4.23□□□□□ -1.73
TARDBP-220ENST00000618606 SPDYE7PQ495Y7 208 aa4.23□□□□□ -1.73
TARDBP-220ENST00000618606 ATP13A4Q4VNC1 1196 aa4.23□□□□□ -1.73
TARDBP-220ENST00000618606 TSHZ3Q63HK5 1081 aa4.23□□□□□ -1.73
TARDBP-220ENST00000618606 Q6ZVL8 140 aa4.23□□□□□ -1.73
TARDBP-220ENST00000618606 KIAA0907Q7Z7F0 614 aaPredicted RBP4.23□□□□□ -1.73
TARDBP-220ENST00000618606 TRMT2AQ8IZ69 625 aaKnown RBP4.23□□□□□ -1.73
TARDBP-220ENST00000618606 GPR156Q8NFN8 814 aa4.23□□□□□ -1.73
TARDBP-220ENST00000618606 RIN2Q8WYP3 895 aaPredicted RBP4.23□□□□□ -1.73
TARDBP-220ENST00000618606 RAX2Q96IS3 184 aa4.23□□□□□ -1.73
TARDBP-220ENST00000618606 Q96MF0 132 aa4.23□□□□□ -1.73
TARDBP-220ENST00000618606 TOPORSQ9NS56 1045 aaPredicted RBP4.23□□□□□ -1.73
TARDBP-220ENST00000618606 FDXRP22570 491 aa4.22□□□□□ -1.73
TARDBP-220ENST00000618606 ADSLP30566 484 aaPredicted RBP4.22□□□□□ -1.73
TARDBP-220ENST00000618606 SIM1P81133 766 aaPredicted RBP4.22□□□□□ -1.73
TARDBP-220ENST00000618606 SP140Q13342 867 aa4.22□□□□□ -1.73
TARDBP-220ENST00000618606 RRP12Q5JTH9 1297 aaKnown RBP4.22□□□□□ -1.73
TARDBP-220ENST00000618606 MED25Q71SY5 747 aa4.22□□□□□ -1.73
TARDBP-220ENST00000618606 FAM43AQ8N2R8 423 aa4.22□□□□□ -1.73
TARDBP-220ENST00000618606 LEO1Q8WVC0 666 aaPredicted RBP4.22□□□□□ -1.73
TARDBP-220ENST00000618606 PHACTR3Q96KR7 559 aa4.22□□□□□ -1.73
TARDBP-220ENST00000618606 ACAP3Q96P50 834 aa4.22□□□□□ -1.73
TARDBP-220ENST00000618606 ALOXE3Q9BYJ1 711 aa4.22□□□□□ -1.73
TARDBP-220ENST00000618606 KMT5AQ9NQR1 393 aa4.22□□□□□ -1.73
TARDBP-220ENST00000618606 DPP7Q9UHL4 492 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms