RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 GDF3Q9NR23 364 aa27.32■■□□□ 1.96
VEGFC-202ENST00000618562 F8VZ95 297 aa27.32■■□□□ 1.96
VEGFC-202ENST00000618562 EXTL3O43909 919 aa27.32■■□□□ 1.96
VEGFC-202ENST00000618562 KIF4AO95239 1232 aa27.32■■□□□ 1.96
VEGFC-202ENST00000618562 SOX5P35711 763 aa27.32■■□□□ 1.96
VEGFC-202ENST00000618562 USP38Q8NB14 1042 aa27.32■■□□□ 1.96
VEGFC-202ENST00000618562 LMBR1Q8WVP7 490 aa27.32■■□□□ 1.96
VEGFC-202ENST00000618562 TOPORSQ9NS56 1045 aaPredicted RBP27.32■■□□□ 1.96
VEGFC-202ENST00000618562 SUCLA2Q9P2R7 463 aaPredicted RBP27.32■■□□□ 1.96
VEGFC-202ENST00000618562 PACSIN2Q9UNF0 486 aaPredicted RBP27.32■■□□□ 1.96
VEGFC-202ENST00000618562 TLL2Q9Y6L7 1015 aa27.32■■□□□ 1.96
VEGFC-202ENST00000618562 C22orf31O95567 290 aa27.31■■□□□ 1.96
VEGFC-202ENST00000618562 SRGAP2CP0DJJ0 459 aa27.31■■□□□ 1.96
VEGFC-202ENST00000618562 INSRRP14616 1297 aa27.31■■□□□ 1.96
VEGFC-202ENST00000618562 CAPN2P17655 700 aa27.31■■□□□ 1.96
VEGFC-202ENST00000618562 EFNA5P52803 228 aa27.31■■□□□ 1.96
VEGFC-202ENST00000618562 DRAP1Q14919 205 aaPredicted RBP27.31■■□□□ 1.96
VEGFC-202ENST00000618562 ZSCAN26Q16670 478 aa27.31■■□□□ 1.96
VEGFC-202ENST00000618562 RNF149Q8NC42 400 aa27.31■■□□□ 1.96
VEGFC-202ENST00000618562 ZBTB9Q96C00 473 aa27.31■■□□□ 1.96
VEGFC-202ENST00000618562 AGO2Q9UKV8 859 aaKnown RBP27.31■■□□□ 1.96
VEGFC-202ENST00000618562 ZNF233A6NK53 670 aa27.31■■□□□ 1.96
VEGFC-202ENST00000618562 TTLL13PA6NNM8 815 aa27.31■■□□□ 1.96
VEGFC-202ENST00000618562 DDX3XO00571 662 aaKnown RBP eCLIP27.31■■□□□ 1.96
VEGFC-202ENST00000618562 PPFIA4O75335 1185 aa27.31■■□□□ 1.96
VEGFC-202ENST00000618562 GJB1P08034 283 aa27.31■■□□□ 1.96
VEGFC-202ENST00000618562 NOP2P46087 812 aaKnown RBP27.31■■□□□ 1.96
VEGFC-202ENST00000618562 INHBEP58166 350 aa27.31■■□□□ 1.96
VEGFC-202ENST00000618562 TNNC1P63316 161 aa27.31■■□□□ 1.96
VEGFC-202ENST00000618562 MAP2K1Q02750 393 aaPredicted RBP27.31■■□□□ 1.96
VEGFC-202ENST00000618562 IQSEC1Q6DN90 963 aa27.31■■□□□ 1.96
VEGFC-202ENST00000618562 SLFN12LQ6IEE8 588 aa27.31■■□□□ 1.96
VEGFC-202ENST00000618562 EFCAB12Q6NXP0 572 aa27.31■■□□□ 1.96
VEGFC-202ENST00000618562 TPCN2Q8NHX9 752 aa27.31■■□□□ 1.96
VEGFC-202ENST00000618562 KIAA1586Q9HCI6 787 aa27.31■■□□□ 1.96
VEGFC-202ENST00000618562 FLRT1Q9NZU1 646 aa27.31■■□□□ 1.96
VEGFC-202ENST00000618562 TMEM59LQ9UK28 342 aa27.31■■□□□ 1.96
VEGFC-202ENST00000618562 KIAA0391O15091 583 aaKnown RBP27.3■■□□□ 1.96
VEGFC-202ENST00000618562 EVI5O60447 810 aa27.3■■□□□ 1.96
VEGFC-202ENST00000618562 MSCO60682 206 aa27.3■■□□□ 1.96
VEGFC-202ENST00000618562 RFX1P22670 979 aa27.3■■□□□ 1.96
VEGFC-202ENST00000618562 DNA2P51530 1060 aa27.3■■□□□ 1.96
VEGFC-202ENST00000618562 CLCN3P51790 818 aa27.3■■□□□ 1.96
VEGFC-202ENST00000618562 NLRP11P59045 1033 aaKnown RBP27.3■■□□□ 1.96
VEGFC-202ENST00000618562 ENPEPQ07075 957 aa27.3■■□□□ 1.96
VEGFC-202ENST00000618562 ZNF484Q5JVG2 852 aa27.3■■□□□ 1.96
VEGFC-202ENST00000618562 LEKR1Q6ZMV7 388 aa27.3■■□□□ 1.96
VEGFC-202ENST00000618562 RHPN2Q8IUC4 686 aa27.3■■□□□ 1.96
VEGFC-202ENST00000618562 TMEM8AQ9HCN3 771 aa27.3■■□□□ 1.96
VEGFC-202ENST00000618562 A0A0B4J269 797 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 RPS6KA5O75582 802 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 CCDC172P0C7W6 258 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 HOXD8P13378 290 aaPredicted RBP27.29■■□□□ 1.96
VEGFC-202ENST00000618562 IGBP1P78318 339 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 KRT39Q6A163 491 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 CRELD2Q6UXH1 353 aaPredicted RBP27.29■■□□□ 1.96
VEGFC-202ENST00000618562 SLFN11Q7Z7L1 901 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 ARHGEF19Q8IW93 802 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 SLC30A5Q8TAD4 765 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 HINFPQ9BQA5 517 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 ANKFY1Q9P2R3 1169 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 TULP1O00294 542 aaPredicted RBP27.29■■□□□ 1.96
VEGFC-202ENST00000618562 HEXIM1O94992 359 aaKnown RBP27.29■■□□□ 1.96
VEGFC-202ENST00000618562 HOXC6P09630 235 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 ACOT2P49753 483 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 MRPS25P82663 173 aaKnown RBP27.29■■□□□ 1.96
VEGFC-202ENST00000618562 PAK2Q13177 524 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 PRAMEF19Q5SWL8 479 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 ALS2CLQ60I27 953 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 USP37Q86T82 979 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 SYCE1Q8N0S2 351 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 METTL13Q8N6R0 699 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 OR6J1Q8NGC5 347 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 ACTRT1Q8TDG2 376 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 USP6NLQ92738 828 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 SEMA4DQ92854 862 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 COQ4Q9Y3A0 265 aa27.29■■□□□ 1.96
VEGFC-202ENST00000618562 KCNK3O14649 394 aa27.28■■□□□ 1.96
VEGFC-202ENST00000618562 GLI1P08151 1106 aa27.28■■□□□ 1.96
VEGFC-202ENST00000618562 MMP3P08254 477 aa27.28■■□□□ 1.96
VEGFC-202ENST00000618562 DLATP10515 647 aaKnown RBP27.28■■□□□ 1.96
VEGFC-202ENST00000618562 GTF2H1P32780 548 aa27.28■■□□□ 1.96
VEGFC-202ENST00000618562 ZPBP2Q6X784 338 aa27.28■■□□□ 1.96
VEGFC-202ENST00000618562 WNT7BP56706 349 aa27.28■■□□□ 1.96
VEGFC-202ENST00000618562 ZBTB41Q5SVQ8 909 aa27.28■■□□□ 1.96
VEGFC-202ENST00000618562 OLIG1Q8TAK6 271 aa27.28■■□□□ 1.96
VEGFC-202ENST00000618562 MSTO1Q9BUK6 570 aa27.28■■□□□ 1.96
VEGFC-202ENST00000618562 H3BRB1 525 aa27.27■■□□□ 1.96
VEGFC-202ENST00000618562 PSMD6Q15008 389 aa27.27■■□□□ 1.96
VEGFC-202ENST00000618562 ARHGAP44Q17R89 818 aa27.27■■□□□ 1.96
VEGFC-202ENST00000618562 ZBTB8OSQ8IWT0 167 aa27.27■■□□□ 1.96
VEGFC-202ENST00000618562 U2AF1L4Q8WU68 220 aaKnown RBP27.27■■□□□ 1.96
VEGFC-202ENST00000618562 RIN2Q8WYP3 895 aaPredicted RBP27.27■■□□□ 1.96
VEGFC-202ENST00000618562 CALR3Q96L12 384 aaKnown RBP27.27■■□□□ 1.96
VEGFC-202ENST00000618562 KRT12Q99456 494 aa27.27■■□□□ 1.96
VEGFC-202ENST00000618562 SH3GL2Q99962 352 aa27.27■■□□□ 1.96
VEGFC-202ENST00000618562 TUT1Q9H6E5 874 aaKnown RBP27.27■■□□□ 1.96
VEGFC-202ENST00000618562 UBE2TQ9NPD8 197 aaPredicted RBP27.27■■□□□ 1.96
VEGFC-202ENST00000618562 CWC15Q9P013 229 aaKnown RBP27.27■■□□□ 1.96
VEGFC-202ENST00000618562 NCANO14594 1321 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms