RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 ALG13Q9NP73 1137 aaKnown RBP17.03■□□□□ 0.32
RPP40-207ENST00000618533 TLR9Q9NR96 1032 aa17.03■□□□□ 0.32
RPP40-207ENST00000618533 CNTN3Q9P232 1028 aa17.03■□□□□ 0.32
RPP40-207ENST00000618533 CGNQ9P2M7 1197 aaKnown RBP17.03■□□□□ 0.32
RPP40-207ENST00000618533 DNAJB4Q9UDY4 337 aa17.03■□□□□ 0.32
RPP40-207ENST00000618533 FSD2A1L4K1 749 aa17.02■□□□□ 0.32
RPP40-207ENST00000618533 FAM189A1O60320 539 aa17.02■□□□□ 0.32
RPP40-207ENST00000618533 KIF20AO95235 890 aa17.02■□□□□ 0.32
RPP40-207ENST00000618533 LDHAP00338 332 aaKnown RBP17.02■□□□□ 0.32
RPP40-207ENST00000618533 CASP1P29466 404 aa17.02■□□□□ 0.32
RPP40-207ENST00000618533 OSTNP61366 133 aa17.02■□□□□ 0.32
RPP40-207ENST00000618533 UBE2HP62256 183 aa17.02■□□□□ 0.32
RPP40-207ENST00000618533 DPYDQ12882 1025 aa17.02■□□□□ 0.32
RPP40-207ENST00000618533 KCNB1Q14721 858 aa17.02■□□□□ 0.32
RPP40-207ENST00000618533 TPRNQ4KMQ1 711 aa17.02■□□□□ 0.32
RPP40-207ENST00000618533 DDX53Q86TM3 631 aaKnown RBP17.02■□□□□ 0.32
RPP40-207ENST00000618533 POMGNT1Q8WZA1 660 aa17.02■□□□□ 0.32
RPP40-207ENST00000618533 UROC1Q96N76 676 aa17.02■□□□□ 0.32
RPP40-207ENST00000618533 PPP1R10Q96QC0 940 aaKnown RBP17.02■□□□□ 0.32
RPP40-207ENST00000618533 COLEC11Q9BWP8 271 aa17.02■□□□□ 0.32
RPP40-207ENST00000618533 HAPLN2Q9GZV7 340 aa17.02■□□□□ 0.32
RPP40-207ENST00000618533 NSUN3Q9H649 340 aaKnown RBP17.02■□□□□ 0.32
RPP40-207ENST00000618533 NGRNQ9NPE2 291 aaKnown RBP17.02■□□□□ 0.32
RPP40-207ENST00000618533 AGO2Q9UKV8 859 aaKnown RBP17.02■□□□□ 0.32
RPP40-207ENST00000618533 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.01■□□□□ 0.31
RPP40-207ENST00000618533 SMIM28A0A1B0GU29 152 aa17.01■□□□□ 0.31
RPP40-207ENST00000618533 ANKRD63C9JTQ0 380 aa17.01■□□□□ 0.31
RPP40-207ENST00000618533 NRP1O14786 923 aa17.01■□□□□ 0.31
RPP40-207ENST00000618533 NCK2O43639 380 aa17.01■□□□□ 0.31
RPP40-207ENST00000618533 PRPF6O94906 941 aaKnown RBP17.01■□□□□ 0.31
RPP40-207ENST00000618533 RHOBTB3O94955 611 aa17.01■□□□□ 0.31
RPP40-207ENST00000618533 RPN1P04843 607 aaKnown RBP17.01■□□□□ 0.31
RPP40-207ENST00000618533 ADRB2P07550 413 aa17.01■□□□□ 0.31
RPP40-207ENST00000618533 PPP2R3AQ06190 1150 aa17.01■□□□□ 0.31
RPP40-207ENST00000618533 KCNA1Q09470 495 aa17.01■□□□□ 0.31
RPP40-207ENST00000618533 CAMK1Q14012 370 aa17.01■□□□□ 0.31
RPP40-207ENST00000618533 NAB2Q15742 525 aa17.01■□□□□ 0.31
RPP40-207ENST00000618533 SLC10A6Q3KNW5 377 aa17.01■□□□□ 0.31
RPP40-207ENST00000618533 KMT5BQ4FZB7 885 aa17.01■□□□□ 0.31
RPP40-207ENST00000618533 FGFBP2Q9BYJ0 223 aa17.01■□□□□ 0.31
RPP40-207ENST00000618533 GTPBP4Q9BZE4 634 aaKnown RBP17.01■□□□□ 0.31
RPP40-207ENST00000618533 RPF1Q9H9Y2 349 aaKnown RBP17.01■□□□□ 0.31
RPP40-207ENST00000618533 CPSF3Q9UKF6 684 aaKnown RBP17.01■□□□□ 0.31
RPP40-207ENST00000618533 ANK1P16157 1881 aa17.01■□□□□ 0.31
RPP40-207ENST00000618533 TTC26A0AVF1 554 aa17■□□□□ 0.31
RPP40-207ENST00000618533 XPOTO43592 962 aaKnown RBP17■□□□□ 0.31
RPP40-207ENST00000618533 B4GALT3O60512 393 aa17■□□□□ 0.31
RPP40-207ENST00000618533 KINO60870 393 aaKnown RBP17■□□□□ 0.31
RPP40-207ENST00000618533 PBX3P40426 434 aa17■□□□□ 0.31
RPP40-207ENST00000618533 OR1G1P47890 313 aa17■□□□□ 0.31
RPP40-207ENST00000618533 HS2ST1Q7LGA3 356 aa17■□□□□ 0.31
RPP40-207ENST00000618533 GOLGA5Q8TBA6 731 aa17■□□□□ 0.31
RPP40-207ENST00000618533 SCFD1Q8WVM8 642 aa17■□□□□ 0.31
RPP40-207ENST00000618533 HPS3Q969F9 1004 aa17■□□□□ 0.31
RPP40-207ENST00000618533 DDX27Q96GQ7 796 aaKnown RBP17■□□□□ 0.31
RPP40-207ENST00000618533 ASB7Q9H672 318 aa17■□□□□ 0.31
RPP40-207ENST00000618533 SLC39A2Q9NP94 309 aa17■□□□□ 0.31
RPP40-207ENST00000618533 RMND1Q9NWS8 449 aa17■□□□□ 0.31
RPP40-207ENST00000618533 MYO7AQ13402 2215 aa17■□□□□ 0.31
RPP40-207ENST00000618533 NT5C1B-RDH14C9J2C7 533 aa16.99■□□□□ 0.31
RPP40-207ENST00000618533 TMEM189-UBE2V1I3L0A0 370 aa16.99■□□□□ 0.31
RPP40-207ENST00000618533 FSCN2O14926 492 aa16.99■□□□□ 0.31
RPP40-207ENST00000618533 SMC2O95347 1197 aa16.99■□□□□ 0.31
RPP40-207ENST00000618533 CXCL8P10145 99 aa16.99■□□□□ 0.31
RPP40-207ENST00000618533 DNAJB1P25685 340 aa16.99■□□□□ 0.31
RPP40-207ENST00000618533 ADSSP30520 456 aa16.99■□□□□ 0.31
RPP40-207ENST00000618533 ARMCX5Q6P1M9 558 aa16.99■□□□□ 0.31
RPP40-207ENST00000618533 GPR65Q8IYL9 337 aa16.99■□□□□ 0.31
RPP40-207ENST00000618533 GBP4Q96PP9 640 aa16.99■□□□□ 0.31
RPP40-207ENST00000618533 GSDMAQ96QA5 445 aa16.99■□□□□ 0.31
RPP40-207ENST00000618533 KIAA1586Q9HCI6 787 aa16.99■□□□□ 0.31
RPP40-207ENST00000618533 MARCH5Q9NX47 278 aa16.99■□□□□ 0.31
RPP40-207ENST00000618533 SSX2IPQ9Y2D8 614 aa16.99■□□□□ 0.31
RPP40-207ENST00000618533 PRG3Q9Y2Y8 225 aaPredicted RBP16.99■□□□□ 0.31
RPP40-207ENST00000618533 DERAQ9Y315 318 aa16.99■□□□□ 0.31
RPP40-207ENST00000618533 IRAK3Q9Y616 596 aa16.99■□□□□ 0.31
RPP40-207ENST00000618533 TISP43B9A030 160 aa16.98■□□□□ 0.31
RPP40-207ENST00000618533 IL18RAPO95256 599 aa16.98■□□□□ 0.31
RPP40-207ENST00000618533 PRR29P0C7W0 189 aa16.98■□□□□ 0.31
RPP40-207ENST00000618533 CYP3A5P20815 502 aa16.98■□□□□ 0.31
RPP40-207ENST00000618533 RPL9P32969 192 aaKnown RBP16.98■□□□□ 0.31
RPP40-207ENST00000618533 TNFSF9P41273 254 aa16.98■□□□□ 0.31
RPP40-207ENST00000618533 ELAVL2Q12926 359 aaKnown RBP16.98■□□□□ 0.31
RPP40-207ENST00000618533 STK4Q13043 487 aa16.98■□□□□ 0.31
RPP40-207ENST00000618533 SMC1AQ14683 1233 aaKnown RBP16.98■□□□□ 0.31
RPP40-207ENST00000618533 ENOX2Q16206 610 aaKnown RBP16.98■□□□□ 0.31
RPP40-207ENST00000618533 KNOP1Q1ED39 458 aaKnown RBP16.98■□□□□ 0.31
RPP40-207ENST00000618533 SEZ6Q53EL9 994 aa16.98■□□□□ 0.31
RPP40-207ENST00000618533 GLRA4Q5JXX5 417 aa16.98■□□□□ 0.31
RPP40-207ENST00000618533 TMEM173Q86WV6 379 aaPredicted RBP16.98■□□□□ 0.31
RPP40-207ENST00000618533 NT5DC4Q86YG4 428 aa16.98■□□□□ 0.31
RPP40-207ENST00000618533 C12orf56Q8IXR9 622 aa16.98■□□□□ 0.31
RPP40-207ENST00000618533 MICALL1Q8N3F8 863 aa16.98■□□□□ 0.31
RPP40-207ENST00000618533 KIAA0895Q8NCT3 520 aa16.98■□□□□ 0.31
RPP40-207ENST00000618533 GLIS3Q8NEA6 775 aa16.98■□□□□ 0.31
RPP40-207ENST00000618533 MICAL1Q8TDZ2 1067 aa16.98■□□□□ 0.31
RPP40-207ENST00000618533 CDCA3Q99618 268 aaPredicted RBP16.98■□□□□ 0.31
RPP40-207ENST00000618533 TCF25Q9BQ70 676 aa16.98■□□□□ 0.31
RPP40-207ENST00000618533 ZBP1Q9H171 429 aa16.98■□□□□ 0.31
RPP40-207ENST00000618533 ENTPD7Q9NQZ7 604 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms