RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 ATP11BQ9Y2G3 1177 aa17.64■□□□□ 0.41
SNAP47-213ENST00000617596 FMO5P49326 533 aa17.63■□□□□ 0.41
SNAP47-213ENST00000617596 FAM26DQ5JW98 314 aa17.63■□□□□ 0.41
SNAP47-213ENST00000617596 SLC27A1Q6PCB7 646 aa17.63■□□□□ 0.41
SNAP47-213ENST00000617596 CCDC186Q7Z3E2 898 aa17.63■□□□□ 0.41
SNAP47-213ENST00000617596 TMEM130Q8N3G9 435 aa17.63■□□□□ 0.41
SNAP47-213ENST00000617596 ZNF516Q92618 1163 aa17.63■□□□□ 0.41
SNAP47-213ENST00000617596 ELMO3Q96BJ8 720 aa17.63■□□□□ 0.41
SNAP47-213ENST00000617596 APOL6Q9BWW8 343 aa17.63■□□□□ 0.41
SNAP47-213ENST00000617596 CXCL16Q9H2A7 254 aa17.63■□□□□ 0.41
SNAP47-213ENST00000617596 NXF3Q9H4D5 531 aaKnown RBP17.63■□□□□ 0.41
SNAP47-213ENST00000617596 C11orf49Q9H6J7 331 aa17.63■□□□□ 0.41
SNAP47-213ENST00000617596 FAM207AQ9NSI2 230 aaPredicted RBP17.63■□□□□ 0.41
SNAP47-213ENST00000617596 RNF19AQ9NV58 838 aa17.63■□□□□ 0.41
SNAP47-213ENST00000617596 RNF225M0QZC1 329 aaPredicted RBP17.62■□□□□ 0.41
SNAP47-213ENST00000617596 EPHB6O15197 1021 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 RPLP2P05387 115 aaKnown RBP17.62■□□□□ 0.41
SNAP47-213ENST00000617596 TNNI1P19237 187 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 EN2P19622 333 aaPredicted RBP17.62■□□□□ 0.41
SNAP47-213ENST00000617596 IBSPP21815 317 aaPredicted RBP17.62■□□□□ 0.41
SNAP47-213ENST00000617596 FAAP100Q0VG06 881 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 PSMD6Q15008 389 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 PCBP1Q15365 356 aaKnown RBP eCLIP17.62■□□□□ 0.41
SNAP47-213ENST00000617596 UBXN11Q5T124 520 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 SCARA3Q6AZY7 606 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 TWF2Q6IBS0 349 aaKnown RBP17.62■□□□□ 0.41
SNAP47-213ENST00000617596 BRSK2Q8IWQ3 736 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 FNBP1Q96RU3 617 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 TRIM6Q9C030 488 aaPredicted RBP17.62■□□□□ 0.41
SNAP47-213ENST00000617596 SNTG2Q9NY99 539 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 SIK3Q9Y2K2 1263 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 ACTN1P12814 892 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 SLC9A1P19634 815 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 RBL2Q08999 1139 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 PAK2Q13177 524 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 LRRC26Q2I0M4 334 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 LRRC8DQ7L1W4 858 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 ANKRD33Q7Z3H0 272 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 ERGIC2Q96RQ1 377 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 PPP1R12CQ9BZL4 782 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 TMEM117Q9H0C3 514 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 RNF39Q9H2S5 420 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 TMX1Q9H3N1 280 aa17.62■□□□□ 0.41
SNAP47-213ENST00000617596 A0A1W2PQC6 194 aa17.61■□□□□ 0.41
SNAP47-213ENST00000617596 MGEA5O60502 916 aa17.61■□□□□ 0.41
SNAP47-213ENST00000617596 AKAP5P24588 427 aa17.61■□□□□ 0.41
SNAP47-213ENST00000617596 AXLP30530 894 aa17.61■□□□□ 0.41
SNAP47-213ENST00000617596 PPP2R3AQ06190 1150 aa17.61■□□□□ 0.41
SNAP47-213ENST00000617596 ANKLE1Q8NAG6 615 aa17.61■□□□□ 0.41
SNAP47-213ENST00000617596 OR5B17Q8NGF7 314 aa17.61■□□□□ 0.41
SNAP47-213ENST00000617596 CAGE1Q8TC20 777 aa17.61■□□□□ 0.41
SNAP47-213ENST00000617596 TMC2Q8TDI7 906 aa17.61■□□□□ 0.41
SNAP47-213ENST00000617596 RPF1Q9H9Y2 349 aaKnown RBP17.61■□□□□ 0.41
SNAP47-213ENST00000617596 ERVK-5Q9HDB9 667 aa17.61■□□□□ 0.41
SNAP47-213ENST00000617596 DCDC2CA8MYV0 355 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 GPR182O15218 404 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 TUBB4AP04350 444 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 GYPCP04921 128 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 SELPP16109 830 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 ADKP55263 362 aaKnown RBP17.6■□□□□ 0.41
SNAP47-213ENST00000617596 MYL7Q01449 175 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 SLC10A6Q3KNW5 377 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 DCAF4L1Q3SXM0 396 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 SCLYQ96I15 445 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 LSM14BQ9BX40 385 aaKnown RBP17.6■□□□□ 0.41
SNAP47-213ENST00000617596 SEZ6LQ9BYH1 1024 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 GCNT4Q9P109 453 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 MROH7Q68CQ1 1323 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 LACTBL1A8MY62 500 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 TLR3O15455 904 aaKnown RBP17.6■□□□□ 0.41
SNAP47-213ENST00000617596 CAND2O75155 1236 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 CLTAP09496 248 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 PON1P27169 355 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 CASP14P31944 242 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 MXI1P50539 228 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 FXR1P51114 621 aaKnown RBP eCLIP17.6■□□□□ 0.41
SNAP47-213ENST00000617596 CCL23P55773 120 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 TBX2Q13207 712 aaPredicted RBP17.6■□□□□ 0.41
SNAP47-213ENST00000617596 GPNMBQ14956 572 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 EXOC3L4Q17RC7 722 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 SV2AQ7L0J3 742 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 GPIHBP1Q8IV16 184 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 ACAP3Q96P50 834 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 HIPK3Q9H422 1215 aa17.6■□□□□ 0.41
SNAP47-213ENST00000617596 MEIS3P2A8K0S8 358 aa17.59■□□□□ 0.41
SNAP47-213ENST00000617596 NBNO60934 754 aa17.59■□□□□ 0.41
SNAP47-213ENST00000617596 TRIM21P19474 475 aaKnown RBP17.59■□□□□ 0.41
SNAP47-213ENST00000617596 BFSP2Q13515 415 aa17.59■□□□□ 0.41
SNAP47-213ENST00000617596 NECAB2Q7Z6G3 386 aa17.59■□□□□ 0.41
SNAP47-213ENST00000617596 EFCAB13Q8IY85 973 aa17.59■□□□□ 0.41
SNAP47-213ENST00000617596 SMG8Q8ND04 991 aaKnown RBP17.59■□□□□ 0.41
SNAP47-213ENST00000617596 KLK14Q9P0G3 267 aa17.59■□□□□ 0.41
SNAP47-213ENST00000617596 IPPQ9Y573 584 aa17.59■□□□□ 0.41
SNAP47-213ENST00000617596 ITIH6Q6UXX5 1313 aa17.59■□□□□ 0.41
SNAP47-213ENST00000617596 TTC26A0AVF1 554 aa17.59■□□□□ 0.41
SNAP47-213ENST00000617596 NFICP08651 508 aa17.59■□□□□ 0.41
SNAP47-213ENST00000617596 CYP2C18P33260 490 aa17.59■□□□□ 0.41
SNAP47-213ENST00000617596 GRM5P41594 1212 aa17.59■□□□□ 0.41
SNAP47-213ENST00000617596 MCCD1P59942 119 aaPredicted RBP17.59■□□□□ 0.41
SNAP47-213ENST00000617596 CLDN10P78369 228 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms