RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 RNF146Q9NTX7 359 aa20.43■□□□□ 0.86
SEMA3B-210ENST00000611067 COL20A1Q9P218 1284 aa20.43■□□□□ 0.86
SEMA3B-210ENST00000611067 DBR1Q9UK59 544 aaKnown RBP20.43■□□□□ 0.86
SEMA3B-210ENST00000611067 DNAJC12Q9UKB3 198 aa20.43■□□□□ 0.86
SEMA3B-210ENST00000611067 COG5Q9UP83 839 aa20.43■□□□□ 0.86
SEMA3B-210ENST00000611067 O00370 1275 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 CLIC2O15247 247 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 PSMC6P62333 389 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 PABPC4Q13310 644 aaKnown RBP eCLIP20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 NSMFQ6X4W1 530 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 RNF207Q6ZRF8 634 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 RHOT2Q8IXI1 618 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 SYTL5Q8TDW5 730 aaPredicted RBP20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 DYDC1Q8WWB3 177 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 IFT74Q96LB3 600 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 ZNF570Q96NI8 536 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 PLCD4Q9BRC7 762 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 ELP3Q9H9T3 547 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 SLC24A3Q9HC58 644 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 ADAMTS5Q9UNA0 930 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 ALG6Q9Y672 507 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 DIAPH2O60879 1101 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 GGPS1O95749 300 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 TNFAIP3P21580 790 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 AADACL2Q6P093 401 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 UBL4BQ8N7F7 174 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 REPS2Q8NFH8 660 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 GPR88Q9GZN0 384 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 FGFR1OP2Q9NVK5 253 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 GGT7Q9UJ14 662 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 VAV3Q9UKW4 847 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 PTPRFP10586 1907 aa20.42■□□□□ 0.86
SEMA3B-210ENST00000611067 FRMPD4Q14CM0 1322 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 GRIK3Q13003 919 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 C11orf63Q6NUN7 778 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 TTC27Q6P3X3 843 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 CCDC137Q6PK04 289 aaKnown RBP20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 CNKSR2Q8WXI2 1034 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 ART4Q93070 314 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 TEX13BQ9BXU2 312 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 ZNF214Q9UL59 606 aaPredicted RBP20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 TCP11X1B4DZS4 312 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 MEIS1O00470 390 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 KIF3CO14782 793 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 GCNT3O95395 438 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 GJB6O95452 261 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 KRT16P08779 473 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 RPA1P27694 616 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 CCDC38Q502W7 563 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 SLC30A10Q6XR72 485 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 CYFIP1Q7L576 1253 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 ERO1BQ86YB8 467 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 OTUD5Q96G74 571 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 MXRA8Q9BRK3 442 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 ZNF577Q9BSK1 485 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 SLC5A4Q9NY91 659 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 TAS2R14Q9NYV8 317 aa20.41■□□□□ 0.86
SEMA3B-210ENST00000611067 SPDYE16A6NNV3 312 aaPredicted RBP20.4■□□□□ 0.86
SEMA3B-210ENST00000611067 GAS7O60861 476 aa20.4■□□□□ 0.86
SEMA3B-210ENST00000611067 PSMC2P35998 433 aaKnown RBP20.4■□□□□ 0.86
SEMA3B-210ENST00000611067 TMEM132BQ14DG7 1078 aa20.4■□□□□ 0.86
SEMA3B-210ENST00000611067 ASRGL1Q7L266 308 aa20.4■□□□□ 0.86
SEMA3B-210ENST00000611067 FAM186BQ8IYM0 893 aa20.4■□□□□ 0.86
SEMA3B-210ENST00000611067 PRCCQ92733 491 aaPredicted RBP20.4■□□□□ 0.86
SEMA3B-210ENST00000611067 SLC5A5Q92911 643 aa20.4■□□□□ 0.86
SEMA3B-210ENST00000611067 ARL2BPQ9Y2Y0 163 aa20.4■□□□□ 0.86
SEMA3B-210ENST00000611067 RIPK3Q9Y572 518 aa20.4■□□□□ 0.86
SEMA3B-210ENST00000611067 ATP2A1O14983 1001 aa20.39■□□□□ 0.86
SEMA3B-210ENST00000611067 TGFB1I1O43294 461 aa20.39■□□□□ 0.86
SEMA3B-210ENST00000611067 SKAP2O75563 359 aaPredicted RBP20.39■□□□□ 0.86
SEMA3B-210ENST00000611067 SPATA31C1P0DKV0 1188 aa20.39■□□□□ 0.86
SEMA3B-210ENST00000611067 CALRP27797 417 aaKnown RBP20.39■□□□□ 0.86
SEMA3B-210ENST00000611067 MSH2P43246 934 aa20.39■□□□□ 0.86
SEMA3B-210ENST00000611067 FMO5P49326 533 aa20.39■□□□□ 0.86
SEMA3B-210ENST00000611067 MAP2K1Q02750 393 aaPredicted RBP20.39■□□□□ 0.86
SEMA3B-210ENST00000611067 LRRC14Q15048 493 aa20.39■□□□□ 0.86
SEMA3B-210ENST00000611067 ZNF568Q3ZCX4 644 aa20.39■□□□□ 0.86
SEMA3B-210ENST00000611067 TRMT10CQ7L0Y3 403 aaKnown RBP20.39■□□□□ 0.86
SEMA3B-210ENST00000611067 ZDHHC14Q8IZN3 488 aa20.39■□□□□ 0.86
SEMA3B-210ENST00000611067 SPDL1Q96EA4 605 aa20.39■□□□□ 0.86
SEMA3B-210ENST00000611067 ZSWIM1Q9BR11 485 aa20.39■□□□□ 0.86
SEMA3B-210ENST00000611067 RXFP1Q9HBX9 757 aa20.39■□□□□ 0.86
SEMA3B-210ENST00000611067 RSPH10B2B2RC85 870 aa20.39■□□□□ 0.85
SEMA3B-210ENST00000611067 PSMD10O75832 226 aa20.39■□□□□ 0.85
SEMA3B-210ENST00000611067 RSPH10BP0C881 870 aa20.39■□□□□ 0.85
SEMA3B-210ENST00000611067 KCNA1Q09470 495 aa20.39■□□□□ 0.85
SEMA3B-210ENST00000611067 NFIL3Q16649 462 aa20.39■□□□□ 0.85
SEMA3B-210ENST00000611067 CYP1B1Q16678 543 aa20.39■□□□□ 0.85
SEMA3B-210ENST00000611067 PCNX4Q63HM2 1172 aa20.39■□□□□ 0.85
SEMA3B-210ENST00000611067 NUGGCQ68CJ6 796 aa20.39■□□□□ 0.85
SEMA3B-210ENST00000611067 NAIF1Q69YI7 327 aaPredicted RBP20.39■□□□□ 0.85
SEMA3B-210ENST00000611067 KRT35Q92764 455 aa20.39■□□□□ 0.85
SEMA3B-210ENST00000611067 ARHGEF2Q92974 986 aaKnown RBP20.39■□□□□ 0.85
SEMA3B-210ENST00000611067 RMDN3Q96TC7 470 aa20.39■□□□□ 0.85
SEMA3B-210ENST00000611067 WDR11Q9BZH6 1224 aa20.39■□□□□ 0.85
SEMA3B-210ENST00000611067 PFASO15067 1338 aa20.39■□□□□ 0.85
SEMA3B-210ENST00000611067 TMEM120BA0PK00 339 aa20.38■□□□□ 0.85
SEMA3B-210ENST00000611067 IRF6O14896 467 aa20.38■□□□□ 0.85
SEMA3B-210ENST00000611067 LIN7AO14910 233 aaPredicted RBP20.38■□□□□ 0.85
SEMA3B-210ENST00000611067 EIF2AK2P19525 551 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms