RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 EPHX2P34913 555 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 ZNF211Q13398 564 aaPredicted RBP14.63□□□□□ -0.07
NEK3-205ENST00000610828 MESDQ14696 234 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 SEZ6Q53EL9 994 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 NAA35Q5VZE5 725 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 C11orf63Q6NUN7 778 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 USP50Q70EL3 339 aaPredicted RBP14.63□□□□□ -0.07
NEK3-205ENST00000610828 FBXO16Q8IX29 292 aaPredicted RBP14.63□□□□□ -0.07
NEK3-205ENST00000610828 DDX1Q92499 740 aaKnown RBP14.63□□□□□ -0.07
NEK3-205ENST00000610828 KCNN1Q92952 543 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 ZNF653Q96CK0 615 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 RNPC3Q96LT9 517 aaKnown RBP14.63□□□□□ -0.07
NEK3-205ENST00000610828 FGD4Q96M96 766 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 SYT17Q9BSW7 474 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 CARD9Q9H257 536 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 TMEM134Q9H6X4 195 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 DIS3Q9Y2L1 958 aaKnown RBP14.63□□□□□ -0.07
NEK3-205ENST00000610828 LRRC37A2A6NM11 1700 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 A0A0B4J269 797 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 ERICH4A6NGS2 130 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 SOCS7O14512 581 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 ADCY3O60266 1144 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 C4BPAP04003 597 aaKnown RBP14.63□□□□□ -0.07
NEK3-205ENST00000610828 FAM153BP0C7A2 387 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 OSBPP22059 807 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 MOGSQ13724 837 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 FAM153CQ494X1 144 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 SPOPLQ6IQ16 392 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 FASTKD5Q7L8L6 764 aaKnown RBP14.63□□□□□ -0.07
NEK3-205ENST00000610828 FAM167AQ96KS9 214 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 GPR20Q99678 358 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 AMACRQ9UHK6 382 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 FAM153AQ9UHL3 310 aa14.63□□□□□ -0.07
NEK3-205ENST00000610828 GUCY2FP51841 1108 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 TCEAL1Q15170 157 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 CELF3Q5SZQ8 465 aaKnown RBP14.62□□□□□ -0.07
NEK3-205ENST00000610828 KCNV1Q6PIU1 500 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 ADAT2Q7Z6V5 191 aaKnown RBP14.62□□□□□ -0.07
NEK3-205ENST00000610828 LRRC71Q8N4P6 559 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 TSEN2Q8NCE0 465 aaKnown RBP14.62□□□□□ -0.07
NEK3-205ENST00000610828 ZNF564Q8TBZ8 553 aaPredicted RBP14.62□□□□□ -0.07
NEK3-205ENST00000610828 BBXQ8WY36 941 aaPredicted RBP14.62□□□□□ -0.07
NEK3-205ENST00000610828 ALG3Q92685 438 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 EXOC4Q96A65 974 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 FAM81BQ96LP2 452 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 NUP85Q9BW27 656 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 FAM204AQ9H8W3 233 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 TTC7AQ9ULT0 858 aaPredicted RBP14.62□□□□□ -0.07
NEK3-205ENST00000610828 SIP14410 1827 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 TTLL13PA6NNM8 815 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 CLDN3O15551 220 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 SRGAP2CP0DJJ0 459 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 COPB2P35606 906 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 ERVK-9P63128 1117 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 NNTQ13423 1086 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 HLTFQ14527 1009 aaKnown RBP eCLIP14.62□□□□□ -0.07
NEK3-205ENST00000610828 KCTD19Q17RG1 926 aaPredicted RBP14.62□□□□□ -0.07
NEK3-205ENST00000610828 EAPPQ56P03 285 aaPredicted RBP14.62□□□□□ -0.07
NEK3-205ENST00000610828 DHX37Q8IY37 1157 aaKnown RBP14.62□□□□□ -0.07
NEK3-205ENST00000610828 UBL4BQ8N7F7 174 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 ZC3H15Q8WU90 426 aaKnown RBP14.62□□□□□ -0.07
NEK3-205ENST00000610828 BTBD6Q96KE9 485 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 SPATA33Q96N06 139 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 TCHPQ9BT92 498 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 TAF1DQ9H5J8 278 aaPredicted RBP14.62□□□□□ -0.07
NEK3-205ENST00000610828 GTF3C4Q9UKN8 822 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 ZNFX1Q9P2E3 1918 aaKnown RBP14.62□□□□□ -0.07
NEK3-205ENST00000610828 PCNTO95613 3336 aa14.62□□□□□ -0.07
NEK3-205ENST00000610828 ADGRA2Q96PE1 1338 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 DNAJC25-GNG10A0A024R161 153 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 MIF4GDA9UHW6 222 aaKnown RBP14.61□□□□□ -0.07
NEK3-205ENST00000610828 VNN1O95497 513 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 COMTP21964 271 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 LMAN1P49257 510 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 ARMC9Q7Z3E5 817 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 CCDC26Q8TAB7 109 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 KRT35Q92764 455 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 NAP1L3Q99457 506 aaPredicted RBP14.61□□□□□ -0.07
NEK3-205ENST00000610828 TRPC6Q9Y210 931 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 NR2E1Q9Y466 385 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 MCM3APO60318 1980 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 GRIN3BO60391 1043 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 HSF2BPO75031 334 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 CYP1A2P05177 515 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 MARCKSL1P49006 195 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 EFNA5P52803 228 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 IER5Q5VY09 327 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 ACAD10Q6JQN1 1059 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 GPAT2Q6NUI2 795 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 MAATS1Q7Z4T9 603 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 ZBTB33Q86T24 672 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 RNF149Q8NC42 400 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 COPS5Q92905 334 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 RUFY1Q96T51 708 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 SLITRK6Q9H5Y7 841 aa14.61□□□□□ -0.07
NEK3-205ENST00000610828 TTI1O43156 1089 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 MTA2O94776 668 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 TXNP10599 105 aaKnown RBP14.6□□□□□ -0.07
NEK3-205ENST00000610828 LAMTOR4Q0VGL1 99 aa14.6□□□□□ -0.07
NEK3-205ENST00000610828 CLEC16AQ2KHT3 1053 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms