RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 ZDHHC15Q96MV8 337 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 LRRC37BQ96QE4 947 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 FAM129AQ9BZQ8 928 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 ERVK-5Q9HDB9 667 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 RNF146Q9NTX7 359 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 AFF2P51816 1311 aa7.31□□□□□ -1.24
SYNPO2-206ENST00000610556 SPEF2Q9C093 1822 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 RBAK-RBAKDNI3L0D1 243 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 IGF2BP3O00425 579 aaKnown RBP eCLIP7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 MT-ND3P03897 115 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 KRT10P13645 584 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 CYP11B1P15538 503 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 PRKCIP41743 596 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 DNAJC3Q13217 504 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 BAATQ14032 418 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 KRT81Q14533 505 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 ERICH1Q86X53 443 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 ETNPPLQ8TBG4 499 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 HSPH1Q92598 858 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 TATDN2Q93075 761 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 OSBPL8Q9BZF1 889 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 POLR3FQ9H1D9 316 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 UVRAGQ9P2Y5 699 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 HERC5Q9UII4 1024 aaKnown RBP7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 AJAP1Q9UKB5 411 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 MAPK13O15264 365 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 UBOX5O94941 541 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 TJP3O95049 919 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 GGPS1O95749 300 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 PSMA2P25787 234 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 TNFRSF8P28908 595 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 POLR2BP30876 1174 aaKnown RBP7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 ANKRD20A8PQ5CZ79 823 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 DAB2IPQ5VWQ8 1189 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 RFX8Q6ZV50 586 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 PAXIP1Q6ZW49 1069 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 C1orf186Q6ZWK4 172 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 GPD1LQ8N335 351 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 MREGQ8N565 214 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 GBP7Q8N8V2 638 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 CFAP61Q8NHU2 1237 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 SLC5A5Q92911 643 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 TAAR1Q96RJ0 339 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 WDR18Q9BV38 432 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 NOD2Q9HC29 1040 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 TXLNGQ9NUQ3 528 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 RBAKQ9NYW8 714 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 CTNNAL1Q9UBT7 734 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 SIPA1L3O60292 1781 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 GTPBP10A4D1E9 387 aaKnown RBP7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 H0YCG3 227 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 OPLAHO14841 1288 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 SHOX2O60902 331 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 CDH16O75309 829 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 TNNC2P02585 160 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 PSAPP07602 524 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 RARGP13631 454 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 ITIH2P19823 946 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 CCND2P30279 289 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 JAK3P52333 1124 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 KRT76Q01546 638 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 GABPAQ06546 454 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 SNRNP48Q6IEG0 339 aaKnown RBP7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 TRMT10CQ7L0Y3 403 aaKnown RBP7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 NOP9Q86U38 636 aaKnown RBP7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 KCTD6Q8NC69 237 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 SLC17A8Q8NDX2 589 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 SPIRE2Q8WWL2 714 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 ERP27Q96DN0 273 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 NLRP4Q96MN2 994 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 PWWP2AQ96N64 755 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 TRAIPQ9BWF2 469 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 LRRC4BQ9NT99 713 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 STK32BQ9NY57 414 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 GTF3C4Q9UKN8 822 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 ARL2BPQ9Y2Y0 163 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 PCDHA10Q9Y5I2 948 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 MYH10P35580 1976 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 IGSF9BQ9UPX0 1349 aa7.3□□□□□ -1.24
SYNPO2-206ENST00000610556 SCN11AQ9UI33 1791 aa7.29□□□□□ -1.24
SYNPO2-206ENST00000610556 CCDC160A6NGH7 325 aa7.29□□□□□ -1.24
SYNPO2-206ENST00000610556 ARHGAP42A6NI28 874 aa7.29□□□□□ -1.24
SYNPO2-206ENST00000610556 CIB2O75838 187 aa7.29□□□□□ -1.24
SYNPO2-206ENST00000610556 MYCNP04198 464 aaPredicted RBP7.29□□□□□ -1.24
SYNPO2-206ENST00000610556 PDHA1P08559 390 aa7.29□□□□□ -1.24
SYNPO2-206ENST00000610556 ELF1P32519 619 aa7.29□□□□□ -1.24
SYNPO2-206ENST00000610556 RPS6P62753 249 aaKnown RBP7.29□□□□□ -1.24
SYNPO2-206ENST00000610556 SPOPLQ6IQ16 392 aa7.29□□□□□ -1.24
SYNPO2-206ENST00000610556 DARS2Q6PI48 645 aaKnown RBP7.29□□□□□ -1.24
SYNPO2-206ENST00000610556 NCAPG2Q86XI2 1143 aa7.29□□□□□ -1.24
SYNPO2-206ENST00000610556 ZBTB8OSQ8IWT0 167 aa7.29□□□□□ -1.24
SYNPO2-206ENST00000610556 CD302Q8IX05 232 aa7.29□□□□□ -1.24
SYNPO2-206ENST00000610556 PDIK1LQ8N165 341 aa7.29□□□□□ -1.24
SYNPO2-206ENST00000610556 PRELID2Q8N945 189 aa7.29□□□□□ -1.24
SYNPO2-206ENST00000610556 MAML1Q92585 1016 aa7.29□□□□□ -1.24
SYNPO2-206ENST00000610556 CFAP36Q96G28 342 aa7.29□□□□□ -1.24
SYNPO2-206ENST00000610556 FAM81BQ96LP2 452 aa7.29□□□□□ -1.24
SYNPO2-206ENST00000610556 RIT2Q99578 217 aa7.29□□□□□ -1.24
SYNPO2-206ENST00000610556 TRABDQ9H4I3 376 aa7.29□□□□□ -1.24
SYNPO2-206ENST00000610556 FAM198AQ9UFP1 575 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms