RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 ANKRD20A1Q5TYW2 823 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 ANKRD20A3Q5VUR7 823 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 CGB2Q6NT52 195 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 ZNF746Q6NUN9 644 aaPredicted RBP23.87■■□□□ 1.41
SHANK2-220ENST00000608988 TATDN1Q6P1N9 297 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 ERICH1Q86X53 443 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 XXYLT1Q8NBI6 393 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 CTNNAL1Q9UBT7 734 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 SIPA1L1O43166 1804 aa23.87■■□□□ 1.41
SHANK2-220ENST00000608988 ABLIM1O14639 778 aa23.86■■□□□ 1.41
SHANK2-220ENST00000608988 HIP1RO75146 1068 aa23.86■■□□□ 1.41
SHANK2-220ENST00000608988 MXI1P50539 228 aa23.86■■□□□ 1.41
SHANK2-220ENST00000608988 YARSP54577 528 aaKnown RBP23.86■■□□□ 1.41
SHANK2-220ENST00000608988 MPP2Q14168 576 aa23.86■■□□□ 1.41
SHANK2-220ENST00000608988 ACAD10Q6JQN1 1059 aa23.86■■□□□ 1.41
SHANK2-220ENST00000608988 KIF2BQ8N4N8 673 aa23.86■■□□□ 1.41
SHANK2-220ENST00000608988 ARMC2Q8NEN0 867 aa23.86■■□□□ 1.41
SHANK2-220ENST00000608988 PRCCQ92733 491 aaPredicted RBP23.86■■□□□ 1.41
SHANK2-220ENST00000608988 FAM212AQ96EL1 285 aa23.86■■□□□ 1.41
SHANK2-220ENST00000608988 RMDN2Q96LZ7 410 aa23.86■■□□□ 1.41
SHANK2-220ENST00000608988 DCLK3Q9C098 648 aa23.86■■□□□ 1.41
SHANK2-220ENST00000608988 AVENQ9NQS1 362 aaPredicted RBP23.86■■□□□ 1.41
SHANK2-220ENST00000608988 EURLQ9NYK6 297 aa23.86■■□□□ 1.41
SHANK2-220ENST00000608988 LARSQ9P2J5 1176 aaKnown RBP23.86■■□□□ 1.41
SHANK2-220ENST00000608988 PI4KBQ9UBF8 816 aa23.86■■□□□ 1.41
SHANK2-220ENST00000608988 STK38LQ9Y2H1 464 aa23.86■■□□□ 1.41
SHANK2-220ENST00000608988 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.86■■□□□ 1.41
SHANK2-220ENST00000608988 FAM47DPA6NHR8 397 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 K7ENM7 598 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 NPM3O75607 178 aaKnown RBP23.85■■□□□ 1.41
SHANK2-220ENST00000608988 BMP3P12645 472 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 CREB1P16220 341 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 POLGP54098 1239 aaPredicted RBP23.85■■□□□ 1.41
SHANK2-220ENST00000608988 C1orf220Q5T0J3 134 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 CDCA2Q69YH5 1023 aaPredicted RBP23.85■■□□□ 1.41
SHANK2-220ENST00000608988 CAPRIN2Q6IMN6 1127 aaKnown RBP23.85■■□□□ 1.41
SHANK2-220ENST00000608988 APOBEC3HQ6NTF7 200 aaKnown RBP23.85■■□□□ 1.41
SHANK2-220ENST00000608988 ECHDC2Q86YB7 292 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 SIAH1Q8IUQ4 282 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 SP8Q8IXZ3 490 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 CERS5Q8N5B7 392 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 GDAP1Q8TB36 358 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 TRIM11Q96F44 468 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 IWS1Q96ST2 819 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 PITPNM3Q9BZ71 974 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 ST6GALNAC4Q9H4F1 302 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 GGT7Q9UJ14 662 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 USH1CQ9Y6N9 552 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 DCTN3O75935 186 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 NDUFB10O96000 172 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 DLG4P78352 724 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 KYNUQ16719 465 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 C1orf54Q8WWF1 131 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 MRIQ9BWK5 157 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 PPCSQ9HAB8 311 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 NAALADL1Q9UQQ1 740 aa23.85■■□□□ 1.41
SHANK2-220ENST00000608988 LY75O60449 1722 aa23.84■■□□□ 1.41
SHANK2-220ENST00000608988 HOXA13P31271 388 aaPredicted RBP23.84■■□□□ 1.41
SHANK2-220ENST00000608988 GCLMP48507 274 aa23.84■■□□□ 1.41
SHANK2-220ENST00000608988 RASSF2P50749 326 aa23.84■■□□□ 1.41
SHANK2-220ENST00000608988 IKQ13123 557 aaPredicted RBP23.84■■□□□ 1.41
SHANK2-220ENST00000608988 B3GNT9Q6UX72 402 aa23.84■■□□□ 1.41
SHANK2-220ENST00000608988 AMIGO3Q86WK7 504 aa23.84■■□□□ 1.41
SHANK2-220ENST00000608988 TDRPQ86YL5 185 aa23.84■■□□□ 1.41
SHANK2-220ENST00000608988 CCDC89Q8N998 374 aa23.84■■□□□ 1.41
SHANK2-220ENST00000608988 SLC17A8Q8NDX2 589 aa23.84■■□□□ 1.41
SHANK2-220ENST00000608988 ETNK1Q9HBU6 452 aa23.84■■□□□ 1.41
SHANK2-220ENST00000608988 SENP1Q9P0U3 644 aa23.84■■□□□ 1.41
SHANK2-220ENST00000608988 LRRC42Q9Y546 428 aa23.84■■□□□ 1.41
SHANK2-220ENST00000608988 MYH11P35749 1972 aa23.84■■□□□ 1.41
SHANK2-220ENST00000608988 PRPF4O43172 522 aaKnown RBP eCLIP23.83■■□□□ 1.411e-6■■■□□ 16.2
SHANK2-220ENST00000608988 HNRNPCL1O60812 293 aaKnown RBP23.83■■□□□ 1.41
SHANK2-220ENST00000608988 MYBL1P10243 752 aa23.83■■□□□ 1.41
SHANK2-220ENST00000608988 ALDH3A1P30838 453 aa23.83■■□□□ 1.41
SHANK2-220ENST00000608988 MGAT5Q09328 741 aa23.83■■□□□ 1.41
SHANK2-220ENST00000608988 MIS18BP1Q6P0N0 1132 aa23.83■■□□□ 1.41
SHANK2-220ENST00000608988 SPICE1Q8N0Z3 855 aa23.83■■□□□ 1.41
SHANK2-220ENST00000608988 RDH13Q8NBN7 331 aa23.83■■□□□ 1.41
SHANK2-220ENST00000608988 SPDL1Q96EA4 605 aa23.83■■□□□ 1.41
SHANK2-220ENST00000608988 POP1Q99575 1024 aaKnown RBP23.83■■□□□ 1.41
SHANK2-220ENST00000608988 TEKT3Q9BXF9 490 aa23.83■■□□□ 1.41
SHANK2-220ENST00000608988 RNPEPL1Q9HAU8 725 aa23.83■■□□□ 1.41
SHANK2-220ENST00000608988 NEU2Q9Y3R4 380 aa23.83■■□□□ 1.41
SHANK2-220ENST00000608988 ATMINO43313 823 aaPredicted RBP23.83■■□□□ 1.4
SHANK2-220ENST00000608988 CYP11B1P15538 503 aa23.83■■□□□ 1.4
SHANK2-220ENST00000608988 ADCY8P40145 1251 aa23.83■■□□□ 1.4
SHANK2-220ENST00000608988 WASHC2DQ5SRD0 308 aa23.83■■□□□ 1.4
SHANK2-220ENST00000608988 DAW1Q8N136 415 aa23.83■■□□□ 1.4
SHANK2-220ENST00000608988 KREMEN1Q96MU8 473 aa23.83■■□□□ 1.4
SHANK2-220ENST00000608988 TIPINQ9BVW5 301 aa23.83■■□□□ 1.4
SHANK2-220ENST00000608988 TMEM117Q9H0C3 514 aa23.83■■□□□ 1.4
SHANK2-220ENST00000608988 HSPBP1Q9NZL4 362 aa23.83■■□□□ 1.4
SHANK2-220ENST00000608988 SMG5Q9UPR3 1016 aaKnown RBP23.83■■□□□ 1.4
SHANK2-220ENST00000608988 A8MUI8 341 aa23.82■■□□□ 1.4
SHANK2-220ENST00000608988 CYP26A1O43174 497 aa23.82■■□□□ 1.4
SHANK2-220ENST00000608988 CHMP2AO43633 222 aa23.82■■□□□ 1.4
SHANK2-220ENST00000608988 GH1P01241 217 aa23.82■■□□□ 1.4
SHANK2-220ENST00000608988 GNAZP19086 355 aa23.82■■□□□ 1.4
SHANK2-220ENST00000608988 PAXIP1Q6ZW49 1069 aaPredicted RBP23.82■■□□□ 1.4
SHANK2-220ENST00000608988 ZDHHC15Q96MV8 337 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms