RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 CPSF3Q9UKF6 684 aaKnown RBP15.53■□□□□ 0.08
CTSA-219ENST00000607841 FAN1Q9Y2M0 1017 aa15.53■□□□□ 0.08
CTSA-219ENST00000607841 SMIM28A0A1B0GU29 152 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 PDXKO00764 312 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 PTGESO14684 152 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 CALUO43852 315 aaPredicted RBP15.52■□□□□ 0.08
CTSA-219ENST00000607841 EXTL3O43909 919 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 MBD3O95983 291 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 GALTP07902 379 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 CXCL8P10145 99 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 KCNE1P15382 129 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 PPP1R2P41236 205 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 TNFSF9P41273 254 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 OR1G1P47890 313 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 ACOT2P49753 483 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 UBE3AQ05086 875 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 DSC1Q08554 894 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 TUSC3Q13454 348 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 CAMK4Q16566 473 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 PTPROQ16827 1216 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 C12orf56Q8IXR9 622 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 COLGALT2Q8IYK4 626 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 GPD1LQ8N335 351 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 ERCC4Q92889 916 aaPredicted RBP15.52■□□□□ 0.08
CTSA-219ENST00000607841 TMEM169Q96HH4 297 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 CDX2Q99626 313 aaPredicted RBP15.52■□□□□ 0.08
CTSA-219ENST00000607841 CBWD1Q9BRT8 395 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 FAM213AQ9BRX8 229 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 LMAN2LQ9H0V9 348 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 PCIF1Q9H4Z3 704 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 STK39Q9UEW8 545 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 PLAGL2Q9UPG8 496 aa15.52■□□□□ 0.08
CTSA-219ENST00000607841 TTC26A0AVF1 554 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 XPOTO43592 962 aaKnown RBP15.51■□□□□ 0.07
CTSA-219ENST00000607841 FGF18O76093 207 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 SLC11A1P49279 550 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 PLCB3Q01970 1234 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 STIM1Q13586 685 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 ENOX2Q16206 610 aaKnown RBP15.51■□□□□ 0.07
CTSA-219ENST00000607841 COBLL1Q53SF7 1204 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 GLRA4Q5JXX5 417 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 ZBTB41Q5SVQ8 909 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 SLC39A11Q8N1S5 342 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 FAM212AQ96EL1 285 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 SAAL1Q96ER3 474 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 UROC1Q96N76 676 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 PPP1R10Q96QC0 940 aaKnown RBP15.51■□□□□ 0.07
CTSA-219ENST00000607841 COLEC11Q9BWP8 271 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 NUP62CLQ9H1M0 184 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 CLSTN2Q9H4D0 955 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 ASB7Q9H672 318 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 HSPBP1Q9NZL4 362 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 LMCD1Q9NZU5 365 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 KIAA1468Q9P260 1216 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 DNAJB4Q9UDY4 337 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 MAN1B1Q9UKM7 699 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 MAPK8IP1Q9UQF2 711 aa15.51■□□□□ 0.07
CTSA-219ENST00000607841 EPOPA6NHQ4 379 aa15.5■□□□□ 0.07
CTSA-219ENST00000607841 ZNF233A6NK53 670 aa15.5■□□□□ 0.07
CTSA-219ENST00000607841 LACTBL1A8MY62 500 aa15.5■□□□□ 0.07
CTSA-219ENST00000607841 RFXAPO00287 272 aa15.5■□□□□ 0.07
CTSA-219ENST00000607841 DLL1O00548 723 aa15.5■□□□□ 0.07
CTSA-219ENST00000607841 NRP1O14786 923 aa15.5■□□□□ 0.07
CTSA-219ENST00000607841 CLIC2O15247 247 aa15.5■□□□□ 0.07
CTSA-219ENST00000607841 IL18RAPO95256 599 aa15.5■□□□□ 0.07
CTSA-219ENST00000607841 ADRB2P07550 413 aa15.5■□□□□ 0.07
CTSA-219ENST00000607841 MCM4P33991 863 aa15.5■□□□□ 0.07
CTSA-219ENST00000607841 PBX3P40426 434 aa15.5■□□□□ 0.07
CTSA-219ENST00000607841 MYBPC2Q14324 1141 aa15.5■□□□□ 0.07
CTSA-219ENST00000607841 BMS1Q14692 1282 aaKnown RBP15.5■□□□□ 0.07
CTSA-219ENST00000607841 CRELD2Q6UXH1 353 aaPredicted RBP15.5■□□□□ 0.07
CTSA-219ENST00000607841 TRIML1Q8N9V2 468 aa15.5■□□□□ 0.07
CTSA-219ENST00000607841 XXYLT1Q8NBI6 393 aa15.5■□□□□ 0.07
CTSA-219ENST00000607841 GDPD5Q8WTR4 605 aa15.5■□□□□ 0.07
CTSA-219ENST00000607841 NOC3LQ8WTT2 800 aaKnown RBP15.5■□□□□ 0.07
CTSA-219ENST00000607841 TMEM174Q8WUU8 243 aa15.5■□□□□ 0.07
CTSA-219ENST00000607841 DDX27Q96GQ7 796 aaKnown RBP15.5■□□□□ 0.07
CTSA-219ENST00000607841 GUCD1Q96NT3 240 aa15.5■□□□□ 0.07
CTSA-219ENST00000607841 KCTD10Q9H3F6 313 aa15.5■□□□□ 0.07
CTSA-219ENST00000607841 RBAKQ9NYW8 714 aaPredicted RBP15.5■□□□□ 0.07
CTSA-219ENST00000607841 TRAF3IP3Q9Y228 551 aa15.5■□□□□ 0.07
CTSA-219ENST00000607841 LZTS1Q9Y250 596 aa15.5■□□□□ 0.07
CTSA-219ENST00000607841 DERAQ9Y315 318 aa15.5■□□□□ 0.07
CTSA-219ENST00000607841 GOLGA8IPA6NC78 632 aa15.49■□□□□ 0.07
CTSA-219ENST00000607841 GOLGA8JA6NMD2 632 aa15.49■□□□□ 0.07
CTSA-219ENST00000607841 NT5C1B-RDH14C9J2C7 533 aa15.49■□□□□ 0.07
CTSA-219ENST00000607841 ITGB1P05556 798 aa15.49■□□□□ 0.07
CTSA-219ENST00000607841 FOSL2P15408 326 aa15.49■□□□□ 0.07
CTSA-219ENST00000607841 POU3F3P20264 500 aaPredicted RBP15.49■□□□□ 0.07
CTSA-219ENST00000607841 PTMSP20962 102 aa15.49■□□□□ 0.07
CTSA-219ENST00000607841 IGFBP4P22692 258 aa15.49■□□□□ 0.07
CTSA-219ENST00000607841 RPL13P26373 211 aaKnown RBP15.49■□□□□ 0.07
CTSA-219ENST00000607841 CYP2J2P51589 502 aa15.49■□□□□ 0.07
CTSA-219ENST00000607841 SURF1Q15526 300 aa15.49■□□□□ 0.07
CTSA-219ENST00000607841 NT5DC4Q86YG4 428 aa15.49■□□□□ 0.07
CTSA-219ENST00000607841 SLC9A9Q8IVB4 645 aa15.49■□□□□ 0.07
CTSA-219ENST00000607841 BRSK2Q8IWQ3 736 aa15.49■□□□□ 0.07
CTSA-219ENST00000607841 SMYD4Q8IYR2 804 aaPredicted RBP15.49■□□□□ 0.07
CTSA-219ENST00000607841 SPPL3Q8TCT6 385 aa15.49■□□□□ 0.07
CTSA-219ENST00000607841 GPT2Q8TD30 523 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms