RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 TRPC7Q9HCX4 862 aa5.55□□□□□ -1.52
SCARNA15-201ENST00000607520 THG1LQ9NWX6 298 aaKnown RBP5.55□□□□□ -1.52
SCARNA15-201ENST00000607520 CLDND1Q9NY35 253 aa5.55□□□□□ -1.52
SCARNA15-201ENST00000607520 TBX20Q9UMR3 447 aa5.55□□□□□ -1.52
SCARNA15-201ENST00000607520 PCDHA5Q9Y5H7 936 aa5.55□□□□□ -1.52
SCARNA15-201ENST00000607520 SPEF2Q9C093 1822 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 KIF5CO60282 957 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 B4GALT4O60513 344 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 ARIH2O95376 493 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 GLUD1P00367 558 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 AFPP02771 609 aaKnown RBP5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 IQCF3P0C7M6 154 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 MAGEA10P43363 369 aaPredicted RBP5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 PDE6CP51160 858 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 PTENP60484 403 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 YWHAHQ04917 246 aaPredicted RBP5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 KCNB1Q14721 858 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 SDE2Q6IQ49 451 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 KSR1Q8IVT5 923 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 FLRT1Q9NZU1 646 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 MYO6Q9UM54 1294 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 LUC7L2Q9Y383 392 aaKnown RBP5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 NFE2L3Q9Y4A8 694 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 UBE4BO95155 1302 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 EML1O00423 815 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 RIOK3O14730 519 aaKnown RBP5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 SART1O43290 800 aaKnown RBP5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 EXTL3O43909 919 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 TUBB4AP04350 444 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 COL6A1P12109 1028 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 XPAP23025 273 aaPredicted RBP5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 TBXAS1P24557 533 aaPredicted RBP5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 AKAP5P24588 427 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 TUFMP49411 452 aaKnown RBP5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 SCNN1GP51170 649 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 VAMP7P51809 220 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 GNG11P61952 73 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 GRIK3Q13003 919 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 DNAJC5GQ8N7S2 189 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 DDX50Q9BQ39 737 aaKnown RBP5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 KIFC3Q9BVG8 833 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 NUP58Q9BVL2 599 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 NGRNQ9NPE2 291 aaKnown RBP5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 ABI2Q9NYB9 513 aaPredicted RBP5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 DNAI1Q9UI46 699 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 CPSF3Q9UKF6 684 aaKnown RBP5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 COL24A1Q17RW2 1714 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 THAP12O43422 761 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 MYL4P12829 197 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 SARSP49591 514 aaKnown RBP5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 BCAR1P56945 870 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 FANCCQ00597 558 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 ASIC2Q16515 512 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 RESP18Q5W5W9 173 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 PPP1R2P3Q6NXS1 205 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 ANKS3Q6ZW76 656 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 PGBD3Q8N328 593 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 PHOSPHO2Q8TCD6 241 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 HINFPQ9BQA5 517 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 NUCKS1Q9H1E3 243 aaKnown RBP5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 IFT122Q9HBG6 1241 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 KCNMB3Q9NPA1 279 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 DPP3Q9NY33 737 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 SH3BP1Q9Y3L3 701 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 NOC2LQ9Y3T9 749 aaKnown RBP5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 SQORQ9Y6N5 450 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 PDE4DIPQ5VU43 2346 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 CASZ1Q86V15 1759 aa5.54□□□□□ -1.52
SCARNA15-201ENST00000607520 PDXKO00764 312 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 ZNF197O14709 1029 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 FOXP2O15409 715 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 ERLIN1O75477 346 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 RECQL4O94761 1208 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 SLU7O95391 586 aaKnown RBP5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 EDNRBP24530 442 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 AVPR1AP37288 418 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 GLUD2P49448 558 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 MORC3Q14149 939 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 SGSM1Q2NKQ1 1148 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 KRT39Q6A163 491 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 OVOS1Q6IE37 1185 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 LLGL2Q6P1M3 1020 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 CCDC62Q6P9F0 684 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 NT5DC4Q86YG4 428 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 GUF1Q8N442 669 aaKnown RBP5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 HASPINQ8TF76 798 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 EMID1Q96A84 441 aaPredicted RBP5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 CCDC42Q96M95 316 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 MAK16Q9BXY0 300 aaKnown RBP5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 NIFKQ9BYG3 293 aaKnown RBP5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 ASB7Q9H672 318 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 TMEM134Q9H6X4 195 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 KIF9Q9HAQ2 790 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 DONSONQ9NYP3 566 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 HSPBP1Q9NZL4 362 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 IMPACTQ9P2X3 320 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 MRPS23Q9Y3D9 190 aaKnown RBP5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 NPHP3-ACAD11A0A0J9YXS1 232 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 CYB561D2O14569 222 aa5.53□□□□□ -1.52
SCARNA15-201ENST00000607520 EIF3DO15371 548 aaKnown RBP eCLIP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms