RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 KCTD10Q9H3F6 313 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 CLSTN2Q9H4D0 955 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 RPF1Q9H9Y2 349 aaKnown RBP15.12■□□□□ 0.01
RNF40-212ENST00000602784 AGPAT3Q9NRZ7 376 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 MTMR10Q9NXD2 777 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 KIAA1468Q9P260 1216 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 HCSTQ9UBK5 93 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 MTUS1Q9ULD2 1270 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 MYO9BQ13459 2157 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 NLRC5Q86WI3 1866 aa15.12■□□□□ 0.01
RNF40-212ENST00000602784 SZT2Q5T011 3432 aa15.11■□□□□ 0.01
RNF40-212ENST00000602784 MEFVO15553 781 aaPredicted RBP15.11■□□□□ 0.01
RNF40-212ENST00000602784 ZC3H11AO75152 810 aaKnown RBP eCLIP15.11■□□□□ 0.01
RNF40-212ENST00000602784 MBD3O95983 291 aa15.11■□□□□ 0.01
RNF40-212ENST00000602784 GALTP07902 379 aa15.11■□□□□ 0.01
RNF40-212ENST00000602784 POU3F3P20264 500 aaPredicted RBP15.11■□□□□ 0.01
RNF40-212ENST00000602784 MCM4P33991 863 aa15.11■□□□□ 0.01
RNF40-212ENST00000602784 TNFSF9P41273 254 aa15.11■□□□□ 0.01
RNF40-212ENST00000602784 ACOT2P49753 483 aa15.11■□□□□ 0.01
RNF40-212ENST00000602784 TUSC3Q13454 348 aa15.11■□□□□ 0.01
RNF40-212ENST00000602784 MYBPC2Q14324 1141 aa15.11■□□□□ 0.01
RNF40-212ENST00000602784 NAB2Q15742 525 aa15.11■□□□□ 0.01
RNF40-212ENST00000602784 SEZ6Q53EL9 994 aa15.11■□□□□ 0.01
RNF40-212ENST00000602784 ZBTB41Q5SVQ8 909 aa15.11■□□□□ 0.01
RNF40-212ENST00000602784 CRELD2Q6UXH1 353 aaPredicted RBP15.11■□□□□ 0.01
RNF40-212ENST00000602784 Q7L0L9 218 aa15.11■□□□□ 0.01
RNF40-212ENST00000602784 ERCC4Q92889 916 aaPredicted RBP15.11■□□□□ 0.01
RNF40-212ENST00000602784 FBXL18Q96ME1 805 aa15.11■□□□□ 0.01
RNF40-212ENST00000602784 PPP1R10Q96QC0 940 aaKnown RBP15.11■□□□□ 0.01
RNF40-212ENST00000602784 ASB7Q9H672 318 aa15.11■□□□□ 0.01
RNF40-212ENST00000602784 CERS4Q9HA82 394 aa15.11■□□□□ 0.01
RNF40-212ENST00000602784 SLC38A7Q9NVC3 462 aa15.11■□□□□ 0.01
RNF40-212ENST00000602784 SPG21Q9NZD8 308 aa15.11■□□□□ 0.01
RNF40-212ENST00000602784 MAN1B1Q9UKM7 699 aa15.11■□□□□ 0.01
RNF40-212ENST00000602784 PLAGL2Q9UPG8 496 aa15.11■□□□□ 0.01
RNF40-212ENST00000602784 CITO14578 2027 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 EPOPA6NHQ4 379 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 B4GALT3O60512 393 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 LPXNO60711 386 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 IL18RAPO95256 599 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 CXCL8P10145 99 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 PPP1R2P41236 205 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 PLCB3Q01970 1234 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 UBE3AQ05086 875 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 PPP2R3AQ06190 1150 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 GPM6BQ13491 265 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 MORC3Q14149 939 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 CAMK4Q16566 473 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 NFIL3Q16649 462 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 SLC9A9Q8IVB4 645 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 SLC39A11Q8N1S5 342 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 GPD1LQ8N335 351 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 TRIML1Q8N9V2 468 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 KLHL23Q8NBE8 558 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 GPT2Q8TD30 523 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 FAM161BQ96MY7 647 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 FAM213AQ9BRX8 229 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 LMAN2LQ9H0V9 348 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 CXCL16Q9H2A7 254 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 PRDM12Q9H4Q4 367 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 HSPBP1Q9NZL4 362 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 LMCD1Q9NZU5 365 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 DNAJB4Q9UDY4 337 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 STK39Q9UEW8 545 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 TRAF3IP3Q9Y228 551 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 LZTS1Q9Y250 596 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 DERAQ9Y315 318 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 KIAA1671Q9BY89 1806 aa15.1■□□□□ 0.01
RNF40-212ENST00000602784 TDRD15B5MCY1 1934 aaKnown RBP15.09■□□□□ 0.01
RNF40-212ENST00000602784 LACTBL1A8MY62 500 aa15.09■□□□□ 0.01
RNF40-212ENST00000602784 FGF18O76093 207 aa15.09■□□□□ 0.01
RNF40-212ENST00000602784 ITGB1P05556 798 aa15.09■□□□□ 0.01
RNF40-212ENST00000602784 PRCPP42785 496 aa15.09■□□□□ 0.01
RNF40-212ENST00000602784 SLC11A1P49279 550 aa15.09■□□□□ 0.01
RNF40-212ENST00000602784 KRT17Q04695 432 aa15.09■□□□□ 0.01
RNF40-212ENST00000602784 ZBTB6Q15916 424 aa15.09■□□□□ 0.01
RNF40-212ENST00000602784 XXYLT1Q8NBI6 393 aa15.09■□□□□ 0.01
RNF40-212ENST00000602784 SPPL3Q8TCT6 385 aa15.09■□□□□ 0.01
RNF40-212ENST00000602784 IGSF21Q96ID5 467 aa15.09■□□□□ 0.01
RNF40-212ENST00000602784 UROC1Q96N76 676 aa15.09■□□□□ 0.01
RNF40-212ENST00000602784 ZMAT2Q96NC0 199 aaKnown RBP15.09■□□□□ 0.01
RNF40-212ENST00000602784 GUCD1Q96NT3 240 aa15.09■□□□□ 0.01
RNF40-212ENST00000602784 CDX2Q99626 313 aaPredicted RBP15.09■□□□□ 0.01
RNF40-212ENST00000602784 NUP62CLQ9H1M0 184 aa15.09■□□□□ 0.01
RNF40-212ENST00000602784 PCIF1Q9H4Z3 704 aa15.09■□□□□ 0.01
RNF40-212ENST00000602784 DMAC2Q9NW81 257 aa15.09■□□□□ 0.01
RNF40-212ENST00000602784 MAPK8IP1Q9UQF2 711 aa15.09■□□□□ 0.01
RNF40-212ENST00000602784 FAN1Q9Y2M0 1017 aa15.09■□□□□ 0.01
RNF40-212ENST00000602784 TRIP11Q15643 1979 aa15.08■□□□□ 0
RNF40-212ENST00000602784 ZNF233A6NK53 670 aa15.08■□□□□ 0
RNF40-212ENST00000602784 NRP1O14786 923 aa15.08■□□□□ 0
RNF40-212ENST00000602784 CLIC2O15247 247 aa15.08■□□□□ 0
RNF40-212ENST00000602784 XPOTO43592 962 aaKnown RBP15.08■□□□□ 0
RNF40-212ENST00000602784 CALUO43852 315 aaPredicted RBP15.08■□□□□ 0
RNF40-212ENST00000602784 CYP3A5P20815 502 aa15.08■□□□□ 0
RNF40-212ENST00000602784 BMP6P22004 513 aa15.08■□□□□ 0
RNF40-212ENST00000602784 STIM1Q13586 685 aa15.08■□□□□ 0
RNF40-212ENST00000602784 EDRF1Q3B7T1 1238 aa15.08■□□□□ 0
RNF40-212ENST00000602784 ZCWPW2Q504Y3 356 aa15.08■□□□□ 0
RNF40-212ENST00000602784 GLRA4Q5JXX5 417 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms