RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 OTOAQ7RTW8 1153 aa17.15■□□□□ 0.34
SYDE1-204ENST00000600440 SNRNP27Q8WVK2 155 aaKnown RBP17.15■□□□□ 0.34
SYDE1-204ENST00000600440 ZNF184Q99676 751 aaPredicted RBP17.15■□□□□ 0.34
SYDE1-204ENST00000600440 ARMCX1Q9P291 453 aa17.15■□□□□ 0.34
SYDE1-204ENST00000600440 STARD13Q9Y3M8 1113 aa17.15■□□□□ 0.34
SYDE1-204ENST00000600440 IL2RBP14784 551 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 AMPD1P23109 780 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 SLC1A5Q15758 541 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.14■□□□□ 0.33
SYDE1-204ENST00000600440 CBWD6Q4V339 395 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 CBWD3Q5JTY5 395 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 CBWD5Q5RIA9 395 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 C12orf60Q5U649 245 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 DAB2IPQ5VWQ8 1189 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 CLNKQ7Z7G1 428 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 APLFQ8IW19 511 aaPredicted RBP17.14■□□□□ 0.33
SYDE1-204ENST00000600440 CCDC24Q8N4L8 307 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 RFWD2Q8NHY2 731 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 RUSC1Q9BVN2 902 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 HEY2Q9UBP5 337 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 NENFQ9UMX5 172 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 SIGLEC16A6NMB1 481 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 EDIL3O43854 480 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 HAUS5O94927 633 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 HSPA6P17066 643 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 HOXD13P35453 343 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 MOGSQ13724 837 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 TMEM63BQ5T3F8 832 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 FYB2Q5VWT5 728 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 CYFIP1Q7L576 1253 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 CFAP61Q8NHU2 1237 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 PTPRN2Q92932 1015 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 HIC2Q96JB3 615 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 EYA3Q99504 573 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 VPS37BQ9H9H4 285 aa17.14■□□□□ 0.33
SYDE1-204ENST00000600440 RPL13P26373 211 aaKnown RBP17.13■□□□□ 0.33
SYDE1-204ENST00000600440 GSTA5Q7RTV2 222 aa17.13■□□□□ 0.33
SYDE1-204ENST00000600440 C10orf82Q8WW14 230 aa17.13■□□□□ 0.33
SYDE1-204ENST00000600440 ELMO3Q96BJ8 720 aa17.13■□□□□ 0.33
SYDE1-204ENST00000600440 SNF8Q96H20 258 aa17.13■□□□□ 0.33
SYDE1-204ENST00000600440 MKNK1Q9BUB5 465 aa17.13■□□□□ 0.33
SYDE1-204ENST00000600440 MIF4GDA9UHW6 222 aaKnown RBP17.13■□□□□ 0.33
SYDE1-204ENST00000600440 FAM200BP0CF97 657 aa17.13■□□□□ 0.33
SYDE1-204ENST00000600440 SLC16A2P36021 539 aa17.13■□□□□ 0.33
SYDE1-204ENST00000600440 WDR72Q3MJ13 1102 aa17.13■□□□□ 0.33
SYDE1-204ENST00000600440 ZFYVE27Q5T4F4 411 aa17.13■□□□□ 0.33
SYDE1-204ENST00000600440 MYLK4Q86YV6 388 aaPredicted RBP17.13■□□□□ 0.33
SYDE1-204ENST00000600440 TAB3Q8N5C8 712 aaPredicted RBP17.13■□□□□ 0.33
SYDE1-204ENST00000600440 PDP2Q9P2J9 529 aa17.13■□□□□ 0.33
SYDE1-204ENST00000600440 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.13■□□□□ 0.33
SYDE1-204ENST00000600440 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.12■□□□□ 0.33
SYDE1-204ENST00000600440 TXNDC9O14530 226 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 CCDC22O60826 627 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 EDF1O60869 148 aaKnown RBP17.12■□□□□ 0.33
SYDE1-204ENST00000600440 EYA4O95677 639 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 PLEKHG4Q58EX7 1191 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 LVRNQ6Q4G3 990 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 RIBC1Q8N443 379 aaPredicted RBP17.12■□□□□ 0.33
SYDE1-204ENST00000600440 SLC4A9Q96Q91 983 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 TIPINQ9BVW5 301 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 SPATA16Q9BXB7 569 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 SPZ1Q9BXG8 430 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 STK33Q9BYT3 514 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 ZWILCHQ9H900 591 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 SAYSD1Q9NPB0 183 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 UBE2TQ9NPD8 197 aaPredicted RBP17.12■□□□□ 0.33
SYDE1-204ENST00000600440 KRT82Q9NSB4 513 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 CLIC5Q9NZA1 410 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 TBCAO75347 108 aaKnown RBP17.12■□□□□ 0.33
SYDE1-204ENST00000600440 ASMTLO95671 621 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 ESRRAP11474 423 aaPredicted RBP17.12■□□□□ 0.33
SYDE1-204ENST00000600440 EVA1CP58658 441 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 DBN1Q16643 649 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 SLC30A10Q6XR72 485 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 PPP4R3CPQ6ZMV5 832 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 TTC7BQ86TV6 843 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 RHOT2Q8IXI1 618 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 SH3TC2Q8TF17 1288 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 GATA6Q92908 595 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 AGPAT1Q99943 283 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 PHRF1Q9P1Y6 1649 aaKnown RBP17.12■□□□□ 0.33
SYDE1-204ENST00000600440 A0A1W2PPM1 405 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 USP17L15C9J2P7 530 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 USP17L13C9JLJ4 530 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 USP17L11C9JVI0 530 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 USP17L18D6R9N7 530 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 USP17L22D6RA61 530 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 USP17L17D6RBQ6 530 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 USP17L19D6RCP7 530 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 USP17L20D6RJB6 530 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 GSC2O15499 205 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 FGFR1P11362 822 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 CYP19A1P11511 503 aaPredicted RBP17.12■□□□□ 0.33
SYDE1-204ENST00000600440 RRM1P23921 792 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 NMT1P30419 496 aaKnown RBP17.12■□□□□ 0.33
SYDE1-204ENST00000600440 INHBCP55103 352 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 TMEM62Q0P6H9 643 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 USP17L24Q0WX57 530 aa17.12■□□□□ 0.33
SYDE1-204ENST00000600440 ACBD5Q5T8D3 534 aaPredicted RBP17.12■□□□□ 0.33
SYDE1-204ENST00000600440 USP17L6PQ6QN14 398 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms