RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 EIF5BO60841 1220 aaKnown RBP16.19■□□□□ 0.18
IRF3-223ENST00000599223 C1RP00736 705 aa16.19■□□□□ 0.18
IRF3-223ENST00000599223 SRFP11831 508 aa16.19■□□□□ 0.18
IRF3-223ENST00000599223 LAMP2P13473 410 aa16.19■□□□□ 0.18
IRF3-223ENST00000599223 NAMPTP43490 491 aa16.19■□□□□ 0.18
IRF3-223ENST00000599223 PSMD5Q16401 504 aa16.19■□□□□ 0.18
IRF3-223ENST00000599223 TTC38Q5R3I4 469 aa16.19■□□□□ 0.18
IRF3-223ENST00000599223 NT5DC1Q5TFE4 455 aa16.19■□□□□ 0.18
IRF3-223ENST00000599223 C4orf32Q8N8J7 132 aa16.19■□□□□ 0.18
IRF3-223ENST00000599223 DEPTORQ8TB45 409 aa16.19■□□□□ 0.18
IRF3-223ENST00000599223 TTPALQ9BTX7 342 aa16.19■□□□□ 0.18
IRF3-223ENST00000599223 BACH2Q9BYV9 841 aa16.19■□□□□ 0.18
IRF3-223ENST00000599223 GDAQ9Y2T3 454 aa16.19■□□□□ 0.18
IRF3-223ENST00000599223 NUMBLQ9Y6R0 609 aa16.19■□□□□ 0.18
IRF3-223ENST00000599223 FANCMQ8IYD8 2048 aa16.19■□□□□ 0.18
IRF3-223ENST00000599223 THP07101 528 aa16.18■□□□□ 0.18
IRF3-223ENST00000599223 CREMQ03060 361 aa16.18■□□□□ 0.18
IRF3-223ENST00000599223 ANGPT1Q15389 498 aa16.18■□□□□ 0.18
IRF3-223ENST00000599223 SAFBQ15424 915 aaKnown RBP eCLIP16.18■□□□□ 0.18
IRF3-223ENST00000599223 TMEM132AQ24JP5 1023 aa16.18■□□□□ 0.18
IRF3-223ENST00000599223 CD300LGQ6UXG3 332 aa16.18■□□□□ 0.18
IRF3-223ENST00000599223 GRASPQ7Z6J2 395 aaPredicted RBP16.18■□□□□ 0.18
IRF3-223ENST00000599223 CEP57Q86XR8 500 aa16.18■□□□□ 0.18
IRF3-223ENST00000599223 CEP120Q8N960 986 aa16.18■□□□□ 0.18
IRF3-223ENST00000599223 DTWD2Q8NBA8 298 aa16.18■□□□□ 0.18
IRF3-223ENST00000599223 C3orf58Q8NDZ4 430 aa16.18■□□□□ 0.18
IRF3-223ENST00000599223 GPR152Q8TDT2 470 aa16.18■□□□□ 0.18
IRF3-223ENST00000599223 RPP25Q9BUL9 199 aaKnown RBP16.18■□□□□ 0.18
IRF3-223ENST00000599223 BHMT2Q9H2M3 363 aa16.18■□□□□ 0.18
IRF3-223ENST00000599223 FOXP1Q9H334 677 aaPredicted RBP16.18■□□□□ 0.18
IRF3-223ENST00000599223 TBC1D17Q9HA65 648 aa16.18■□□□□ 0.18
IRF3-223ENST00000599223 GOLGA2P5Q9HBQ8 144 aa16.18■□□□□ 0.18
IRF3-223ENST00000599223 WNT16Q9UBV4 365 aa16.18■□□□□ 0.18
IRF3-223ENST00000599223 ZNF292O60281 2723 aa16.18■□□□□ 0.18
IRF3-223ENST00000599223 PATJQ8NI35 1801 aa16.17■□□□□ 0.18
IRF3-223ENST00000599223 CCL16O15467 120 aa16.17■□□□□ 0.18
IRF3-223ENST00000599223 C8AP07357 584 aa16.17■□□□□ 0.18
IRF3-223ENST00000599223 FXR2P51116 673 aaKnown RBP eCLIP16.17■□□□□ 0.18
IRF3-223ENST00000599223 ORC2Q13416 577 aaPredicted RBP16.17■□□□□ 0.18
IRF3-223ENST00000599223 RSPO2Q6UXX9 243 aaPredicted RBP16.17■□□□□ 0.18
IRF3-223ENST00000599223 DAW1Q8N136 415 aa16.17■□□□□ 0.18
IRF3-223ENST00000599223 FBXO18Q8NFZ0 1043 aa16.17■□□□□ 0.18
IRF3-223ENST00000599223 ERMNQ8TAM6 284 aa16.17■□□□□ 0.18
IRF3-223ENST00000599223 FGF14Q92915 247 aa16.17■□□□□ 0.18
IRF3-223ENST00000599223 PPP1R10Q96QC0 940 aaKnown RBP16.17■□□□□ 0.18
IRF3-223ENST00000599223 LIMCH1Q9UPQ0 1083 aa16.17■□□□□ 0.18
IRF3-223ENST00000599223 CACNA1IQ9P0X4 2223 aa16.17■□□□□ 0.18
IRF3-223ENST00000599223 MYH11P35749 1972 aa16.17■□□□□ 0.18
IRF3-223ENST00000599223 EP300Q09472 2414 aaPredicted RBP16.16■□□□□ 0.18
IRF3-223ENST00000599223 PP2D1A8MPX8 630 aa16.16■□□□□ 0.18
IRF3-223ENST00000599223 I3L4J1 428 aa16.16■□□□□ 0.18
IRF3-223ENST00000599223 FSHRP23945 695 aa16.16■□□□□ 0.18
IRF3-223ENST00000599223 CCT6AP40227 531 aaKnown RBP16.16■□□□□ 0.18
IRF3-223ENST00000599223 TOB1P50616 345 aaPredicted RBP16.16■□□□□ 0.18
IRF3-223ENST00000599223 SOX4Q06945 474 aaPredicted RBP16.16■□□□□ 0.18
IRF3-223ENST00000599223 DCAF4L1Q3SXM0 396 aa16.16■□□□□ 0.18
IRF3-223ENST00000599223 ATF7IP2Q5U623 682 aa16.16■□□□□ 0.18
IRF3-223ENST00000599223 HAUS3Q68CZ6 603 aa16.16■□□□□ 0.18
IRF3-223ENST00000599223 PARM1Q6UWI2 310 aa16.16■□□□□ 0.18
IRF3-223ENST00000599223 SLC7A14Q8TBB6 771 aa16.16■□□□□ 0.18
IRF3-223ENST00000599223 KIF2CQ99661 725 aa16.16■□□□□ 0.18
IRF3-223ENST00000599223 RTP3Q9BQQ7 232 aa16.16■□□□□ 0.18
IRF3-223ENST00000599223 ADPGKQ9BRR6 497 aa16.16■□□□□ 0.18
IRF3-223ENST00000599223 LLPHQ9BRT6 129 aaKnown RBP16.16■□□□□ 0.18
IRF3-223ENST00000599223 UPF2Q9HAU5 1272 aaKnown RBP16.16■□□□□ 0.18
IRF3-223ENST00000599223 ARHGEF3Q9NR81 526 aa16.16■□□□□ 0.18
IRF3-223ENST00000599223 HCFC1R1Q9NWW0 138 aa16.16■□□□□ 0.18
IRF3-223ENST00000599223 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.16■□□□□ 0.186e-9■■■□□ 17.9
IRF3-223ENST00000599223 RBM19Q9Y4C8 960 aaKnown RBP16.16■□□□□ 0.18
IRF3-223ENST00000599223 TMEM189-UBE2V1I3L0A0 370 aa16.15■□□□□ 0.18
IRF3-223ENST00000599223 MEFVO15553 781 aaPredicted RBP16.15■□□□□ 0.18
IRF3-223ENST00000599223 FGFR3P22607 806 aa16.15■□□□□ 0.18
IRF3-223ENST00000599223 TKTP29401 623 aaKnown RBP16.15■□□□□ 0.18
IRF3-223ENST00000599223 CLCNKBP51801 687 aa16.15■□□□□ 0.18
IRF3-223ENST00000599223 PPP2R5AQ15172 486 aa16.15■□□□□ 0.18
IRF3-223ENST00000599223 PPM1LQ5SGD2 360 aa16.15■□□□□ 0.18
IRF3-223ENST00000599223 LIN9Q5TKA1 542 aa16.15■□□□□ 0.18
IRF3-223ENST00000599223 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.15■□□□□ 0.18
IRF3-223ENST00000599223 TAS1R3Q7RTX0 852 aa16.15■□□□□ 0.18
IRF3-223ENST00000599223 ITFG1Q8TB96 612 aa16.15■□□□□ 0.18
IRF3-223ENST00000599223 NKD2Q969F2 451 aaPredicted RBP16.15■□□□□ 0.18
IRF3-223ENST00000599223 DDX27Q96GQ7 796 aaKnown RBP16.15■□□□□ 0.18
IRF3-223ENST00000599223 RUSC1Q9BVN2 902 aa16.15■□□□□ 0.18
IRF3-223ENST00000599223 CDT1Q9H211 546 aa16.15■□□□□ 0.18
IRF3-223ENST00000599223 DDX19AQ9NUU7 478 aaKnown RBP16.15■□□□□ 0.18
IRF3-223ENST00000599223 MTRRQ9UBK8 725 aa16.15■□□□□ 0.18
IRF3-223ENST00000599223 KIAA1024Q9UPX6 916 aa16.15■□□□□ 0.18
IRF3-223ENST00000599223 PHLPP2Q6ZVD8 1323 aa16.15■□□□□ 0.18
IRF3-223ENST00000599223 B3GAT3O94766 335 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 DCNP07585 359 aaKnown RBP16.14■□□□□ 0.17
IRF3-223ENST00000599223 HNRNPA1P09651 372 aaKnown RBP eCLIP16.14■□□□□ 0.17
IRF3-223ENST00000599223 HOXA9P31269 272 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 OR1D2P34982 312 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 MAPK7Q13164 816 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 RAB33AQ14088 237 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 IL17AQ16552 155 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 UPP1Q16831 310 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 KCNK18Q7Z418 384 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 IGSF22Q8N9C0 903 aa16.14■□□□□ 0.17
IRF3-223ENST00000599223 SNX29Q8TEQ0 813 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms