RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 PANK4Q9NVE7 773 aa13.2□□□□□ -0.3
ZNF548-209ENST00000598895 CLDND1Q9NY35 253 aa13.2□□□□□ -0.3
ZNF548-209ENST00000598895 HIDE1A8MVS5 230 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 TISP43B9A030 160 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 HNRNPDLO14979 420 aaKnown RBP13.19□□□□□ -0.3
ZNF548-209ENST00000598895 INPPL1O15357 1258 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 TOM1L1O75674 476 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 MCF2P10911 925 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 PFKFB1P16118 471 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 KCNA5P22460 613 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 PROZP22891 400 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 GRM5P41594 1212 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 AFMP43652 599 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 YARSP54577 528 aaKnown RBP13.19□□□□□ -0.3
ZNF548-209ENST00000598895 RBM10P98175 930 aaKnown RBP13.19□□□□□ -0.3
ZNF548-209ENST00000598895 GRIK3Q13003 919 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 NOLC1Q14978 699 aaKnown RBP eCLIP13.19□□□□□ -0.3
ZNF548-209ENST00000598895 HERC4Q5GLZ8 1057 aaPredicted RBP13.19□□□□□ -0.3
ZNF548-209ENST00000598895 GRAMD1CQ8IYS0 662 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 VPS52Q8N1B4 723 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 FAM200AQ8TCP9 573 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 HASPINQ8TF76 798 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 HPS3Q969F9 1004 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 PAAF1Q9BRP4 392 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 TMEM175Q9BSA9 504 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 VN1R3Q9BXE9 311 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 FGFBP2Q9BYJ0 223 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 TNMDQ9H2S6 317 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 TLE6Q9H808 572 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 UBE2ZQ9H832 354 aaPredicted RBP13.19□□□□□ -0.3
ZNF548-209ENST00000598895 MARCH5Q9NX47 278 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 SERTAD1Q9UHV2 236 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 KCNH3Q9ULD8 1083 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 LZTS1Q9Y250 596 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 TRIP11Q15643 1979 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 REV3LO60673 3130 aa13.19□□□□□ -0.3
ZNF548-209ENST00000598895 ANKRD63C9JTQ0 380 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 H3BQ06 376 aaPredicted RBP13.18□□□□□ -0.3
ZNF548-209ENST00000598895 TULP1O00294 542 aaPredicted RBP13.18□□□□□ -0.3
ZNF548-209ENST00000598895 FSCN2O14926 492 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 CLDN3O15551 220 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 GCNT3O95395 438 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 THP07101 528 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 MYBP10242 640 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 GAP43P17677 238 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 TNFSF9P41273 254 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 CASP5P51878 434 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 ASIC1P78348 528 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 GTF2BQ00403 316 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 DSC1Q08554 894 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 KCNA1Q09470 495 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 CLUL1Q15846 466 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 LLGL2Q6P1M3 1020 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 ZPBP2Q6X784 338 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 ZNF720Q7Z2F6 126 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 ACAP3Q96P50 834 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 CUEDC2Q9H467 287 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 GOLGA2P5Q9HBQ8 144 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 KBTBD4Q9NVX7 518 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 COG5Q9UP83 839 aa13.18□□□□□ -0.3
ZNF548-209ENST00000598895 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.17□□□□□ -0.3
ZNF548-209ENST00000598895 C2CD2LO14523 706 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 MEFVO15553 781 aaPredicted RBP13.17□□□□□ -0.3
ZNF548-209ENST00000598895 NR1I2O75469 434 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 CXCL14O95715 111 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 MRPS5P82675 430 aaKnown RBP13.17□□□□□ -0.3
ZNF548-209ENST00000598895 SPAG1Q07617 926 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 DLX2Q07687 328 aaPredicted RBP13.17□□□□□ -0.3
ZNF548-209ENST00000598895 MCL1Q07820 350 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 COASYQ13057 564 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 TUSC3Q13454 348 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 SMC1AQ14683 1233 aaKnown RBP13.17□□□□□ -0.3
ZNF548-209ENST00000598895 ZBTB41Q5SVQ8 909 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 ADALQ6DHV7 355 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 SLC39A4Q6P5W5 647 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 TAS1R1Q7RTX1 841 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.17□□□□□ -0.3
ZNF548-209ENST00000598895 DDX53Q86TM3 631 aaKnown RBP13.17□□□□□ -0.3
ZNF548-209ENST00000598895 MAP4K3Q8IVH8 894 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 CCDC65Q8IXS2 484 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 CEP57L1Q8IYX8 460 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 TMEM130Q8N3G9 435 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 GLIS3Q8NEA6 775 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 ATXN2LQ8WWM7 1075 aaKnown RBP13.17□□□□□ -0.3
ZNF548-209ENST00000598895 PPP2R3CQ969Q6 453 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 PABPC5Q96DU9 382 aaKnown RBP13.17□□□□□ -0.3
ZNF548-209ENST00000598895 B3GALT6Q96L58 329 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 SNX27Q96L92 541 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 ASB2Q96Q27 587 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 COLEC11Q9BWP8 271 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 TRIM9Q9C026 710 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 LRRC27Q9C0I9 530 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 ZBP1Q9H171 429 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 TOPORSQ9NS56 1045 aaPredicted RBP13.17□□□□□ -0.3
ZNF548-209ENST00000598895 SEL1LQ9UBV2 794 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 CITO14578 2027 aa13.17□□□□□ -0.3
ZNF548-209ENST00000598895 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.16□□□□□ -0.3
ZNF548-209ENST00000598895 SMIM28A0A1B0GU29 152 aa13.16□□□□□ -0.3
ZNF548-209ENST00000598895 TBX10O75333 385 aa13.16□□□□□ -0.3
ZNF548-209ENST00000598895 PRPF6O94906 941 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms