RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 STRA6Q9BX79 667 aa13.15□□□□□ -0.3
ARHGEF1-216ENST00000598587 PLEKHA5Q9HAU0 1116 aa13.15□□□□□ -0.3
ARHGEF1-216ENST00000598587 NGRNQ9NPE2 291 aaKnown RBP13.15□□□□□ -0.3
ARHGEF1-216ENST00000598587 CNTN3Q9P232 1028 aa13.15□□□□□ -0.3
ARHGEF1-216ENST00000598587 AGO2Q9UKV8 859 aaKnown RBP13.15□□□□□ -0.3
ARHGEF1-216ENST00000598587 EYSQ5T1H1 3165 aa13.15□□□□□ -0.3
ARHGEF1-216ENST00000598587 COL6A3P12111 3177 aa13.14□□□□□ -0.31
ARHGEF1-216ENST00000598587 NT5C1B-RDH14C9J2C7 533 aa13.14□□□□□ -0.31
ARHGEF1-216ENST00000598587 PTGESO14684 152 aa13.14□□□□□ -0.31
ARHGEF1-216ENST00000598587 KINO60870 393 aaKnown RBP13.14□□□□□ -0.31
ARHGEF1-216ENST00000598587 CSPG5O95196 566 aa13.14□□□□□ -0.31
ARHGEF1-216ENST00000598587 SRGAP2BP0DMP2 458 aa13.14□□□□□ -0.31
ARHGEF1-216ENST00000598587 GARTP22102 1010 aa13.14□□□□□ -0.31
ARHGEF1-216ENST00000598587 CA8P35219 290 aa13.14□□□□□ -0.31
ARHGEF1-216ENST00000598587 AFF1P51825 1210 aaKnown RBP13.14□□□□□ -0.31
ARHGEF1-216ENST00000598587 CASP5P51878 434 aa13.14□□□□□ -0.31
ARHGEF1-216ENST00000598587 TMC7Q7Z402 723 aa13.14□□□□□ -0.31
ARHGEF1-216ENST00000598587 CD302Q8IX05 232 aa13.14□□□□□ -0.31
ARHGEF1-216ENST00000598587 TMEM87AQ8NBN3 555 aa13.14□□□□□ -0.31
ARHGEF1-216ENST00000598587 GSTCDQ8NEC7 633 aa13.14□□□□□ -0.31
ARHGEF1-216ENST00000598587 RPF1Q9H9Y2 349 aaKnown RBP13.14□□□□□ -0.31
ARHGEF1-216ENST00000598587 MIOSQ9NXC5 875 aa13.14□□□□□ -0.31
ARHGEF1-216ENST00000598587 COG5Q9UP83 839 aa13.14□□□□□ -0.31
ARHGEF1-216ENST00000598587 SSX2IPQ9Y2D8 614 aa13.14□□□□□ -0.31
ARHGEF1-216ENST00000598587 PRG3Q9Y2Y8 225 aaPredicted RBP13.14□□□□□ -0.31
ARHGEF1-216ENST00000598587 STYXL1Q9Y6J8 313 aa13.14□□□□□ -0.31
ARHGEF1-216ENST00000598587 SF3B1O75533 1304 aaKnown RBP eCLIP13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 REV3LO60673 3130 aa13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 SMIM28A0A1B0GU29 152 aa13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 RPN1P04843 607 aaKnown RBP13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 CXCL8P10145 99 aa13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 KCNE1P15382 129 aa13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 DNAJB1P25685 340 aa13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 CASP1P29466 404 aa13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 SNRPFP62306 86 aaKnown RBP13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 POU5F1Q01860 360 aaKnown RBP13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 EHHADHQ08426 723 aa13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 AAK1Q2M2I8 961 aa13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 XKR4Q5GH76 650 aa13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 GLRA4Q5JXX5 417 aa13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 PLPP4Q5VZY2 271 aa13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 ARMCX5Q6P1M9 558 aa13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 SLC39A4Q6P5W5 647 aa13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 ALKAL1Q6UXT8 129 aa13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 HS2ST1Q7LGA3 356 aa13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 FMR1NBQ8N0W7 255 aaPredicted RBP13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 VPS52Q8N1B4 723 aa13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 PPP1R10Q96QC0 940 aaKnown RBP13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 CDCA3Q99618 268 aaPredicted RBP13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 RMND1Q9NWS8 449 aa13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 CGNQ9P2M7 1197 aaKnown RBP13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 THEGQ9P2T0 379 aa13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 ADAM28Q9UKQ2 775 aa13.13□□□□□ -0.31
ARHGEF1-216ENST00000598587 CASTOR2A6NHX0 329 aa13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 ANKRD63C9JTQ0 380 aa13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 FSCN2O14926 492 aa13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 TRAPPC3O43617 180 aa13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 TADA2AO75478 443 aa13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 PRPF6O94906 941 aaKnown RBP13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 IL18RAPO95256 599 aa13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 SMC2O95347 1197 aa13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 SOD2P04179 222 aa13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 URODP06132 367 aa13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 CREMQ03060 361 aa13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 KCNA1Q09470 495 aa13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 ELAVL2Q12926 359 aaKnown RBP13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 KMT5BQ4FZB7 885 aa13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 SEZ6Q53EL9 994 aa13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 TCEAL5Q5H9L2 206 aa13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 EPM2AIP1Q7L775 607 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 GOLGA5Q8TBA6 731 aa13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 ZNF507Q8TCN5 953 aa13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 HLA-CQ95604 372 aa13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 DDX27Q96GQ7 796 aaKnown RBP13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 TIGD1Q96MW7 591 aa13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 FGFBP2Q9BYJ0 223 aa13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 GTPBP4Q9BZE4 634 aaKnown RBP13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 HAPLN2Q9GZV7 340 aa13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 SLC39A2Q9NP94 309 aa13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 CPSF3Q9UKF6 684 aaKnown RBP13.12□□□□□ -0.31
ARHGEF1-216ENST00000598587 VWA8A3KMH1 1905 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 TTC26A0AVF1 554 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 TMEM189-UBE2V1I3L0A0 370 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 KLRC4O43908 158 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 FAM189A1O60320 539 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 B4GALT3O60512 393 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 CTSAP10619 480 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 RPL9P32969 192 aaKnown RBP13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 TNFSF9P41273 254 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 ERVFC1P60507 584 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 UBE2HP62256 183 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 DPYDQ12882 1025 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 CAMK1Q14012 370 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 NAB2Q15742 525 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 ENOX2Q16206 610 aaKnown RBP13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 BMT2Q1RMZ1 405 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 SLC10A6Q3KNW5 377 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 KIAA1841Q6NSI8 718 aa13.11□□□□□ -0.31
ARHGEF1-216ENST00000598587 FUT10Q6P4F1 479 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms