RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 CRELD2Q6UXH1 353 aaPredicted RBP22.15■■□□□ 1.14
PNKP-211ENST00000598020 HS2ST1Q7LGA3 356 aa22.15■■□□□ 1.14
PNKP-211ENST00000598020 CD302Q8IX05 232 aa22.15■■□□□ 1.14
PNKP-211ENST00000598020 COLGALT2Q8IYK4 626 aa22.15■■□□□ 1.14
PNKP-211ENST00000598020 FAM193BQ96PV7 902 aaPredicted RBP22.15■■□□□ 1.14
PNKP-211ENST00000598020 PPP1R10Q96QC0 940 aaKnown RBP22.15■■□□□ 1.14
PNKP-211ENST00000598020 CBWD1Q9BRT8 395 aa22.15■■□□□ 1.14
PNKP-211ENST00000598020 CXCL16Q9H2A7 254 aa22.15■■□□□ 1.14
PNKP-211ENST00000598020 KCTD10Q9H3F6 313 aa22.15■■□□□ 1.14
PNKP-211ENST00000598020 CLSTN2Q9H4D0 955 aa22.15■■□□□ 1.14
PNKP-211ENST00000598020 AGPAT3Q9NRZ7 376 aa22.15■■□□□ 1.14
PNKP-211ENST00000598020 PLAGL2Q9UPG8 496 aa22.15■■□□□ 1.14
PNKP-211ENST00000598020 SZT2Q5T011 3432 aa22.15■■□□□ 1.14
PNKP-211ENST00000598020 SMIM28A0A1B0GU29 152 aa22.14■■□□□ 1.13
PNKP-211ENST00000598020 PDXKO00764 312 aa22.14■■□□□ 1.13
PNKP-211ENST00000598020 B4GALT3O60512 393 aa22.14■■□□□ 1.13
PNKP-211ENST00000598020 GALTP07902 379 aa22.14■■□□□ 1.13
PNKP-211ENST00000598020 CXCL8P10145 99 aa22.14■■□□□ 1.13
PNKP-211ENST00000598020 PPM1AP35813 382 aa22.14■■□□□ 1.13
PNKP-211ENST00000598020 ALDH7A1P49419 539 aaKnown RBP22.14■■□□□ 1.13
PNKP-211ENST00000598020 BCAR1P56945 870 aa22.14■■□□□ 1.13
PNKP-211ENST00000598020 ENOX2Q16206 610 aaKnown RBP22.14■■□□□ 1.13
PNKP-211ENST00000598020 PRDM12Q9H4Q4 367 aa22.14■■□□□ 1.13
PNKP-211ENST00000598020 RPF1Q9H9Y2 349 aaKnown RBP22.14■■□□□ 1.13
PNKP-211ENST00000598020 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.14■■□□□ 1.13
PNKP-211ENST00000598020 EXTL3O43909 919 aa22.13■■□□□ 1.13
PNKP-211ENST00000598020 LPXNO60711 386 aa22.13■■□□□ 1.13
PNKP-211ENST00000598020 ZC3H11AO75152 810 aaKnown RBP eCLIP22.13■■□□□ 1.13
PNKP-211ENST00000598020 ALDH2P05091 517 aa22.13■■□□□ 1.13
PNKP-211ENST00000598020 POU3F3P20264 500 aaPredicted RBP22.13■■□□□ 1.13
PNKP-211ENST00000598020 ACOT2P49753 483 aa22.13■■□□□ 1.13
PNKP-211ENST00000598020 PLCB3Q01970 1234 aa22.13■■□□□ 1.13
PNKP-211ENST00000598020 TUSC3Q13454 348 aa22.13■■□□□ 1.13
PNKP-211ENST00000598020 SLC39A11Q8N1S5 342 aa22.13■■□□□ 1.13
PNKP-211ENST00000598020 KLHL23Q8NBE8 558 aa22.13■■□□□ 1.13
PNKP-211ENST00000598020 GPT2Q8TD30 523 aa22.13■■□□□ 1.13
PNKP-211ENST00000598020 FBXL18Q96ME1 805 aa22.13■■□□□ 1.13
PNKP-211ENST00000598020 FAM161BQ96MY7 647 aa22.13■■□□□ 1.13
PNKP-211ENST00000598020 GUCD1Q96NT3 240 aa22.13■■□□□ 1.13
PNKP-211ENST00000598020 KIAA1586Q9HCI6 787 aa22.13■■□□□ 1.13
PNKP-211ENST00000598020 SPG21Q9NZD8 308 aa22.13■■□□□ 1.13
PNKP-211ENST00000598020 KIAA1468Q9P260 1216 aa22.13■■□□□ 1.13
PNKP-211ENST00000598020 DNAJB4Q9UDY4 337 aa22.13■■□□□ 1.13
PNKP-211ENST00000598020 MAN1B1Q9UKM7 699 aa22.13■■□□□ 1.13
PNKP-211ENST00000598020 TRAF3IP3Q9Y228 551 aa22.13■■□□□ 1.13
PNKP-211ENST00000598020 PDCD11Q14690 1871 aaKnown RBP22.13■■□□□ 1.13
PNKP-211ENST00000598020 CHD7Q9P2D1 2997 aa22.12■■□□□ 1.13
PNKP-211ENST00000598020 MCM4P33991 863 aa22.12■■□□□ 1.13
PNKP-211ENST00000598020 SLC11A1P49279 550 aa22.12■■□□□ 1.13
PNKP-211ENST00000598020 PPP2R3AQ06190 1150 aa22.12■■□□□ 1.13
PNKP-211ENST00000598020 GPM6BQ13491 265 aa22.12■■□□□ 1.13
PNKP-211ENST00000598020 MYBPC2Q14324 1141 aa22.12■■□□□ 1.13
PNKP-211ENST00000598020 HSP90AA2PQ14568 343 aaPredicted RBP22.12■■□□□ 1.13
PNKP-211ENST00000598020 CAMK4Q16566 473 aa22.12■■□□□ 1.13
PNKP-211ENST00000598020 SLC9A9Q8IVB4 645 aa22.12■■□□□ 1.13
PNKP-211ENST00000598020 GPD1LQ8N335 351 aa22.12■■□□□ 1.13
PNKP-211ENST00000598020 TRIML1Q8N9V2 468 aa22.12■■□□□ 1.13
PNKP-211ENST00000598020 ZMAT2Q96NC0 199 aaKnown RBP22.12■■□□□ 1.13
PNKP-211ENST00000598020 CDX2Q99626 313 aaPredicted RBP22.12■■□□□ 1.13
PNKP-211ENST00000598020 ASB7Q9H672 318 aa22.12■■□□□ 1.13
PNKP-211ENST00000598020 SLC38A7Q9NVC3 462 aa22.12■■□□□ 1.13
PNKP-211ENST00000598020 HSPBP1Q9NZL4 362 aa22.12■■□□□ 1.13
PNKP-211ENST00000598020 LMCD1Q9NZU5 365 aa22.12■■□□□ 1.13
PNKP-211ENST00000598020 LZTS1Q9Y250 596 aa22.12■■□□□ 1.13
PNKP-211ENST00000598020 FGF18O76093 207 aa22.11■■□□□ 1.13
PNKP-211ENST00000598020 MBD3O95983 291 aa22.11■■□□□ 1.13
PNKP-211ENST00000598020 ITGB1P05556 798 aa22.11■■□□□ 1.13
PNKP-211ENST00000598020 UBE3AQ05086 875 aa22.11■■□□□ 1.13
PNKP-211ENST00000598020 MORC3Q14149 939 aa22.11■■□□□ 1.13
PNKP-211ENST00000598020 NFIL3Q16649 462 aa22.11■■□□□ 1.13
PNKP-211ENST00000598020 SPPL3Q8TCT6 385 aa22.11■■□□□ 1.13
PNKP-211ENST00000598020 SAAL1Q96ER3 474 aa22.11■■□□□ 1.13
PNKP-211ENST00000598020 FAM213AQ9BRX8 229 aa22.11■■□□□ 1.13
PNKP-211ENST00000598020 LMAN2LQ9H0V9 348 aa22.11■■□□□ 1.13
PNKP-211ENST00000598020 PCIF1Q9H4Z3 704 aa22.11■■□□□ 1.13
PNKP-211ENST00000598020 DMAC2Q9NW81 257 aa22.11■■□□□ 1.13
PNKP-211ENST00000598020 FAN1Q9Y2M0 1017 aa22.11■■□□□ 1.13
PNKP-211ENST00000598020 ANK1P16157 1881 aa22.11■■□□□ 1.13
PNKP-211ENST00000598020 LACTBL1A8MY62 500 aa22.1■■□□□ 1.13
PNKP-211ENST00000598020 RFXAPO00287 272 aa22.1■■□□□ 1.13
PNKP-211ENST00000598020 NRP1O14786 923 aa22.1■■□□□ 1.13
PNKP-211ENST00000598020 PBX3P40426 434 aa22.1■■□□□ 1.13
PNKP-211ENST00000598020 PPP1R2P41236 205 aa22.1■■□□□ 1.13
PNKP-211ENST00000598020 PRCPP42785 496 aa22.1■■□□□ 1.13
PNKP-211ENST00000598020 ZBTB6Q15916 424 aa22.1■■□□□ 1.13
PNKP-211ENST00000598020 GLRA4Q5JXX5 417 aa22.1■■□□□ 1.13
PNKP-211ENST00000598020 BRSK2Q8IWQ3 736 aa22.1■■□□□ 1.13
PNKP-211ENST00000598020 SMYD4Q8IYR2 804 aaPredicted RBP22.1■■□□□ 1.13
PNKP-211ENST00000598020 ADSSL1Q8N142 457 aa22.1■■□□□ 1.13
PNKP-211ENST00000598020 XXYLT1Q8NBI6 393 aa22.1■■□□□ 1.13
PNKP-211ENST00000598020 ZSWIM2Q8NEG5 633 aa22.1■■□□□ 1.13
PNKP-211ENST00000598020 GDPD5Q8WTR4 605 aa22.1■■□□□ 1.13
PNKP-211ENST00000598020 IGSF21Q96ID5 467 aa22.1■■□□□ 1.13
PNKP-211ENST00000598020 UROC1Q96N76 676 aa22.1■■□□□ 1.13
PNKP-211ENST00000598020 NUP62CLQ9H1M0 184 aa22.1■■□□□ 1.13
PNKP-211ENST00000598020 MAPK8IP1Q9UQF2 711 aa22.1■■□□□ 1.13
PNKP-211ENST00000598020 DERAQ9Y315 318 aa22.1■■□□□ 1.13
PNKP-211ENST00000598020 COL4A4P53420 1690 aaPredicted RBP22.1■■□□□ 1.13
PNKP-211ENST00000598020 CLIC2O15247 247 aa22.09■■□□□ 1.13
PNKP-211ENST00000598020 CALUO43852 315 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms